Oct 10 17:59:20.146 INFO testing mttmartin/anneal_predictor against master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513 for rustdoc-test-static-cling Oct 10 17:59:20.146 INFO running: cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt build --frozen Oct 10 17:59:20.146 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/test-source/worker-2/rustdoc-test-static-cling/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling/worker-2/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt build --frozen" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "1536M" "--network" "none" "crater"` Oct 10 17:59:20.679 INFO blam! 37e99366da4edf8dda2086798ba286e01735f937af3f8fdfb62272f185181e28 Oct 10 17:59:20.681 INFO running `"docker" "start" "-a" "37e99366da4edf8dda2086798ba286e01735f937af3f8fdfb62272f185181e28"` Oct 10 17:59:22.564 INFO kablam! usermod: no changes Oct 10 17:59:22.624 INFO kablam! Compiling anneal_predictor v0.1.0 (/source) Oct 10 17:59:23.281 INFO kablam! warning: method `deltaG_dinucleotide` should have a snake case name such as `delta_g_dinucleotide` Oct 10 17:59:23.281 INFO kablam! --> src/main.rs:8:2 Oct 10 17:59:23.281 INFO kablam! | Oct 10 17:59:23.281 INFO kablam! 8 | fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 { Oct 10 17:59:23.281 INFO kablam! | _____^ Oct 10 17:59:23.281 INFO kablam! 9 | | let mut deltaS = 0.0; Oct 10 17:59:23.281 INFO kablam! 10 | | let mut deltaH = 0.0; Oct 10 17:59:23.281 INFO kablam! 11 | | Oct 10 17:59:23.281 INFO kablam! ... | Oct 10 17:59:23.281 INFO kablam! 279 | | deltaG Oct 10 17:59:23.281 INFO kablam! 280 | | } Oct 10 17:59:23.281 INFO kablam! | |_____^ Oct 10 17:59:23.281 INFO kablam! | Oct 10 17:59:23.281 INFO kablam! = note: #[warn(non_snake_case)] on by default Oct 10 17:59:23.281 INFO kablam! Oct 10 17:59:23.293 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:23.293 INFO kablam! --> src/main.rs:9:7 Oct 10 17:59:23.293 INFO kablam! | Oct 10 17:59:23.293 INFO kablam! 9 | let mut deltaS = 0.0; Oct 10 17:59:23.293 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:23.293 INFO kablam! Oct 10 17:59:23.293 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:23.293 INFO kablam! --> src/main.rs:10:7 Oct 10 17:59:23.293 INFO kablam! | Oct 10 17:59:23.293 INFO kablam! 10 | let mut deltaH = 0.0; Oct 10 17:59:23.293 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:23.293 INFO kablam! Oct 10 17:59:23.293 INFO kablam! warning: variable `deltaG` should have a snake case name such as `delta_g` Oct 10 17:59:23.293 INFO kablam! --> src/main.rs:278:7 Oct 10 17:59:23.293 INFO kablam! | Oct 10 17:59:23.293 INFO kablam! 278 | let deltaG = deltaH - self.temperature * deltaS; Oct 10 17:59:23.294 INFO kablam! | ^^^^^^ Oct 10 17:59:23.294 INFO kablam! Oct 10 17:59:23.294 INFO kablam! warning: method `initiation_termination_deltaG` should have a snake case name such as `initiation_termination_delta_g` Oct 10 17:59:23.294 INFO kablam! --> src/main.rs:282:1 Oct 10 17:59:23.294 INFO kablam! | Oct 10 17:59:23.294 INFO kablam! 282 | / fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 { Oct 10 17:59:23.294 INFO kablam! 283 | | if (template_nucleotide == "A" && oligo_nucleotide == "T") || (template_nucleotide == "T" && oligo_nucleotide == "A") { Oct 10 17:59:23.295 INFO kablam! 284 | | let deltaH = 9.62; Oct 10 17:59:23.295 INFO kablam! 285 | | let deltaS = 17.15/1000.0; Oct 10 17:59:23.295 INFO kablam! ... | Oct 10 17:59:23.295 INFO kablam! 296 | | } Oct 10 17:59:23.296 INFO kablam! 297 | | } Oct 10 17:59:23.296 INFO kablam! | |_^ Oct 10 17:59:23.296 INFO kablam! Oct 10 17:59:23.296 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:23.296 INFO kablam! --> src/main.rs:284:7 Oct 10 17:59:23.297 INFO kablam! | Oct 10 17:59:23.297 INFO kablam! 284 | let deltaH = 9.62; Oct 10 17:59:23.297 INFO kablam! | ^^^^^^ Oct 10 17:59:23.297 INFO kablam! Oct 10 17:59:23.297 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:23.298 INFO kablam! --> src/main.rs:285:7 Oct 10 17:59:23.298 INFO kablam! | Oct 10 17:59:23.298 INFO kablam! 285 | let deltaS = 17.15/1000.0; Oct 10 17:59:23.298 INFO kablam! | ^^^^^^ Oct 10 17:59:23.298 INFO kablam! Oct 10 17:59:23.299 INFO kablam! warning: variable `deltaGinit` should have a snake case name such as `delta_ginit` Oct 10 17:59:23.299 INFO kablam! --> src/main.rs:286:7 Oct 10 17:59:23.299 INFO kablam! | Oct 10 17:59:23.299 INFO kablam! 286 | let deltaGinit = deltaH - (self.temperature*deltaS); Oct 10 17:59:23.300 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:23.300 INFO kablam! Oct 10 17:59:23.300 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:23.300 INFO kablam! --> src/main.rs:289:7 Oct 10 17:59:23.300 INFO kablam! | Oct 10 17:59:23.301 INFO kablam! 289 | let deltaH = 0.4184; Oct 10 17:59:23.301 INFO kablam! | ^^^^^^ Oct 10 17:59:23.301 INFO kablam! Oct 10 17:59:23.301 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:23.302 INFO kablam! --> src/main.rs:290:7 Oct 10 17:59:23.302 INFO kablam! | Oct 10 17:59:23.302 INFO kablam! 290 | let deltaS = -11.72/1000.0; Oct 10 17:59:23.302 INFO kablam! | ^^^^^^ Oct 10 17:59:23.302 INFO kablam! Oct 10 17:59:23.303 INFO kablam! warning: variable `deltaGinit` should have a snake case name such as `delta_ginit` Oct 10 17:59:23.303 INFO kablam! --> src/main.rs:291:7 Oct 10 17:59:23.303 INFO kablam! | Oct 10 17:59:23.303 INFO kablam! 291 | let deltaGinit = deltaH - (self.temperature*deltaS); Oct 10 17:59:23.304 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:23.304 INFO kablam! Oct 10 17:59:23.304 INFO kablam! warning: method `calc_deltaG` should have a snake case name such as `calc_delta_g` Oct 10 17:59:23.304 INFO kablam! --> src/main.rs:299:1 Oct 10 17:59:23.304 INFO kablam! | Oct 10 17:59:23.304 INFO kablam! 299 | / fn calc_deltaG(&self, template_piece: String) -> f64{ Oct 10 17:59:23.304 INFO kablam! 300 | | let mut deltaG = 0.0; Oct 10 17:59:23.304 INFO kablam! 301 | | println!("template piece: {:?}", template_piece); Oct 10 17:59:23.304 INFO kablam! 302 | | for i in 0..(self.oligo.len()-1) { Oct 10 17:59:23.304 INFO kablam! ... | Oct 10 17:59:23.304 INFO kablam! 317 | | deltaG Oct 10 17:59:23.305 INFO kablam! 318 | | } Oct 10 17:59:23.305 INFO kablam! | |_^ Oct 10 17:59:23.305 INFO kablam! Oct 10 17:59:23.305 INFO kablam! warning: variable `deltaG` should have a snake case name such as `delta_g` Oct 10 17:59:23.305 INFO kablam! --> src/main.rs:300:6 Oct 10 17:59:23.305 INFO kablam! | Oct 10 17:59:23.305 INFO kablam! 300 | let mut deltaG = 0.0; Oct 10 17:59:23.305 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:23.305 INFO kablam! Oct 10 17:59:23.305 INFO kablam! warning: variable `initiation_deltaG` should have a snake case name such as `initiation_delta_g` Oct 10 17:59:23.305 INFO kablam! --> src/main.rs:303:7 Oct 10 17:59:23.305 INFO kablam! | Oct 10 17:59:23.305 INFO kablam! 303 | let mut initiation_deltaG = 0.0; Oct 10 17:59:23.305 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^ Oct 10 17:59:23.305 INFO kablam! Oct 10 17:59:23.305 INFO kablam! warning: variable `dinucleotide_deltaG` should have a snake case name such as `dinucleotide_delta_g` Oct 10 17:59:23.305 INFO kablam! --> src/main.rs:306:7 Oct 10 17:59:23.305 INFO kablam! | Oct 10 17:59:23.305 INFO kablam! 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); Oct 10 17:59:23.305 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^ Oct 10 17:59:23.305 INFO kablam! Oct 10 17:59:23.305 INFO kablam! warning: method `lowest_deltaG` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:23.305 INFO kablam! --> src/main.rs:320:2 Oct 10 17:59:23.305 INFO kablam! | Oct 10 17:59:23.305 INFO kablam! 320 | fn lowest_deltaG(&self) -> f64 { Oct 10 17:59:23.306 INFO kablam! | _____^ Oct 10 17:59:23.306 INFO kablam! 321 | | let mut lowestDeltaG = 0.0; Oct 10 17:59:23.306 INFO kablam! 322 | | for i in 0..(self.template.len() - self.oligo.len()) { Oct 10 17:59:23.306 INFO kablam! 323 | | let template_piece = self.template[i..(self.oligo.len()+i)].to_string(); Oct 10 17:59:23.306 INFO kablam! ... | Oct 10 17:59:23.306 INFO kablam! 329 | | lowestDeltaG Oct 10 17:59:23.306 INFO kablam! 330 | | } Oct 10 17:59:23.306 INFO kablam! | |_____^ Oct 10 17:59:23.306 INFO kablam! Oct 10 17:59:23.306 INFO kablam! warning: variable `lowestDeltaG` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:23.306 INFO kablam! --> src/main.rs:321:7 Oct 10 17:59:23.306 INFO kablam! | Oct 10 17:59:23.306 INFO kablam! 321 | let mut lowestDeltaG = 0.0; Oct 10 17:59:23.306 INFO kablam! | ^^^^^^^^^^^^^^^^ Oct 10 17:59:23.306 INFO kablam! Oct 10 17:59:23.306 INFO kablam! warning: variable `currentDeltaG` should have a snake case name such as `current_delta_g` Oct 10 17:59:23.306 INFO kablam! --> src/main.rs:324:8 Oct 10 17:59:23.306 INFO kablam! | Oct 10 17:59:23.306 INFO kablam! 324 | let currentDeltaG = self.calc_deltaG(template_piece); Oct 10 17:59:23.306 INFO kablam! | ^^^^^^^^^^^^^ Oct 10 17:59:23.306 INFO kablam! Oct 10 17:59:23.306 INFO kablam! warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:23.306 INFO kablam! --> src/main.rs:339:6 Oct 10 17:59:23.306 INFO kablam! | Oct 10 17:59:23.306 INFO kablam! 339 | let lowest_delta_G = simulation.lowest_deltaG(); Oct 10 17:59:23.307 INFO kablam! | ^^^^^^^^^^^^^^ Oct 10 17:59:23.307 INFO kablam! Oct 10 17:59:24.309 INFO kablam! Finished dev [unoptimized + debuginfo] target(s) in 1.71s Oct 10 17:59:24.311 INFO kablam! su: No module specific data is present Oct 10 17:59:25.759 INFO running `"docker" "rm" "-f" "37e99366da4edf8dda2086798ba286e01735f937af3f8fdfb62272f185181e28"` Oct 10 17:59:26.088 INFO blam! 37e99366da4edf8dda2086798ba286e01735f937af3f8fdfb62272f185181e28 Oct 10 17:59:26.104 INFO running: cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen --no-run Oct 10 17:59:26.104 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/test-source/worker-2/rustdoc-test-static-cling/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling/worker-2/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen --no-run" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "1536M" "--network" "none" "crater"` Oct 10 17:59:26.654 INFO blam! f555152a3496233d9aaff0a061b7fa1f5b61a5b70302d0e8858a2ab70d7faba5 Oct 10 17:59:26.655 INFO running `"docker" "start" "-a" "f555152a3496233d9aaff0a061b7fa1f5b61a5b70302d0e8858a2ab70d7faba5"` Oct 10 17:59:28.864 INFO kablam! usermod: no changes Oct 10 17:59:28.929 INFO kablam! Compiling anneal_predictor v0.1.0 (/source) Oct 10 17:59:29.817 INFO kablam! warning: method `deltaG_dinucleotide` should have a snake case name such as `delta_g_dinucleotide` Oct 10 17:59:29.817 INFO kablam! --> src/main.rs:8:2 Oct 10 17:59:29.817 INFO kablam! | Oct 10 17:59:29.817 INFO kablam! 8 | fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 { Oct 10 17:59:29.818 INFO kablam! | _____^ Oct 10 17:59:29.818 INFO kablam! 9 | | let mut deltaS = 0.0; Oct 10 17:59:29.818 INFO kablam! 10 | | let mut deltaH = 0.0; Oct 10 17:59:29.819 INFO kablam! 11 | | Oct 10 17:59:29.819 INFO kablam! ... | Oct 10 17:59:29.819 INFO kablam! 279 | | deltaG Oct 10 17:59:29.820 INFO kablam! 280 | | } Oct 10 17:59:29.820 INFO kablam! | |_____^ Oct 10 17:59:29.820 INFO kablam! | Oct 10 17:59:29.821 INFO kablam! = note: #[warn(non_snake_case)] on by default Oct 10 17:59:29.821 INFO kablam! Oct 10 17:59:29.821 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:29.821 INFO kablam! --> src/main.rs:9:7 Oct 10 17:59:29.822 INFO kablam! | Oct 10 17:59:29.822 INFO kablam! 9 | let mut deltaS = 0.0; Oct 10 17:59:29.822 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:29.823 INFO kablam! Oct 10 17:59:29.823 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:29.823 INFO kablam! --> src/main.rs:10:7 Oct 10 17:59:29.823 INFO kablam! | Oct 10 17:59:29.824 INFO kablam! 10 | let mut deltaH = 0.0; Oct 10 17:59:29.824 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:29.824 INFO kablam! Oct 10 17:59:29.825 INFO kablam! warning: variable `deltaG` should have a snake case name such as `delta_g` Oct 10 17:59:29.825 INFO kablam! --> src/main.rs:278:7 Oct 10 17:59:29.825 INFO kablam! | Oct 10 17:59:29.826 INFO kablam! 278 | let deltaG = deltaH - self.temperature * deltaS; Oct 10 17:59:29.826 INFO kablam! | ^^^^^^ Oct 10 17:59:29.826 INFO kablam! Oct 10 17:59:29.826 INFO kablam! warning: method `initiation_termination_deltaG` should have a snake case name such as `initiation_termination_delta_g` Oct 10 17:59:29.827 INFO kablam! --> src/main.rs:282:1 Oct 10 17:59:29.827 INFO kablam! | Oct 10 17:59:29.827 INFO kablam! 282 | / fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 { Oct 10 17:59:29.828 INFO kablam! 283 | | if (template_nucleotide == "A" && oligo_nucleotide == "T") || (template_nucleotide == "T" && oligo_nucleotide == "A") { Oct 10 17:59:29.828 INFO kablam! 284 | | let deltaH = 9.62; Oct 10 17:59:29.828 INFO kablam! 285 | | let deltaS = 17.15/1000.0; Oct 10 17:59:29.829 INFO kablam! ... | Oct 10 17:59:29.829 INFO kablam! 296 | | } Oct 10 17:59:29.829 INFO kablam! 297 | | } Oct 10 17:59:29.830 INFO kablam! | |_^ Oct 10 17:59:29.830 INFO kablam! Oct 10 17:59:29.830 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:29.830 INFO kablam! --> src/main.rs:284:7 Oct 10 17:59:29.831 INFO kablam! | Oct 10 17:59:29.831 INFO kablam! 284 | let deltaH = 9.62; Oct 10 17:59:29.831 INFO kablam! | ^^^^^^ Oct 10 17:59:29.832 INFO kablam! Oct 10 17:59:29.832 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:29.832 INFO kablam! --> src/main.rs:285:7 Oct 10 17:59:29.832 INFO kablam! | Oct 10 17:59:29.833 INFO kablam! 285 | let deltaS = 17.15/1000.0; Oct 10 17:59:29.833 INFO kablam! | ^^^^^^ Oct 10 17:59:29.833 INFO kablam! Oct 10 17:59:29.834 INFO kablam! warning: variable `deltaGinit` should have a snake case name such as `delta_ginit` Oct 10 17:59:29.834 INFO kablam! --> src/main.rs:286:7 Oct 10 17:59:29.834 INFO kablam! | Oct 10 17:59:29.834 INFO kablam! 286 | let deltaGinit = deltaH - (self.temperature*deltaS); Oct 10 17:59:29.835 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:29.835 INFO kablam! Oct 10 17:59:29.835 INFO kablam! warning: variable `deltaH` should have a snake case name such as `delta_h` Oct 10 17:59:29.836 INFO kablam! --> src/main.rs:289:7 Oct 10 17:59:29.836 INFO kablam! | Oct 10 17:59:29.836 INFO kablam! 289 | let deltaH = 0.4184; Oct 10 17:59:29.837 INFO kablam! | ^^^^^^ Oct 10 17:59:29.837 INFO kablam! Oct 10 17:59:29.837 INFO kablam! warning: variable `deltaS` should have a snake case name such as `delta_s` Oct 10 17:59:29.837 INFO kablam! --> src/main.rs:290:7 Oct 10 17:59:29.838 INFO kablam! | Oct 10 17:59:29.838 INFO kablam! 290 | let deltaS = -11.72/1000.0; Oct 10 17:59:29.838 INFO kablam! | ^^^^^^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: variable `deltaGinit` should have a snake case name such as `delta_ginit` Oct 10 17:59:29.839 INFO kablam! --> src/main.rs:291:7 Oct 10 17:59:29.839 INFO kablam! | Oct 10 17:59:29.839 INFO kablam! 291 | let deltaGinit = deltaH - (self.temperature*deltaS); Oct 10 17:59:29.839 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: method `calc_deltaG` should have a snake case name such as `calc_delta_g` Oct 10 17:59:29.839 INFO kablam! --> src/main.rs:299:1 Oct 10 17:59:29.839 INFO kablam! | Oct 10 17:59:29.839 INFO kablam! 299 | / fn calc_deltaG(&self, template_piece: String) -> f64{ Oct 10 17:59:29.839 INFO kablam! 300 | | let mut deltaG = 0.0; Oct 10 17:59:29.839 INFO kablam! 301 | | println!("template piece: {:?}", template_piece); Oct 10 17:59:29.839 INFO kablam! 302 | | for i in 0..(self.oligo.len()-1) { Oct 10 17:59:29.839 INFO kablam! ... | Oct 10 17:59:29.839 INFO kablam! 317 | | deltaG Oct 10 17:59:29.839 INFO kablam! 318 | | } Oct 10 17:59:29.839 INFO kablam! | |_^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: variable `deltaG` should have a snake case name such as `delta_g` Oct 10 17:59:29.839 INFO kablam! --> src/main.rs:300:6 Oct 10 17:59:29.839 INFO kablam! | Oct 10 17:59:29.839 INFO kablam! 300 | let mut deltaG = 0.0; Oct 10 17:59:29.839 INFO kablam! | ^^^^^^^^^^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: variable `initiation_deltaG` should have a snake case name such as `initiation_delta_g` Oct 10 17:59:29.839 INFO kablam! --> src/main.rs:303:7 Oct 10 17:59:29.839 INFO kablam! | Oct 10 17:59:29.839 INFO kablam! 303 | let mut initiation_deltaG = 0.0; Oct 10 17:59:29.839 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: variable `dinucleotide_deltaG` should have a snake case name such as `dinucleotide_delta_g` Oct 10 17:59:29.839 INFO kablam! --> src/main.rs:306:7 Oct 10 17:59:29.839 INFO kablam! | Oct 10 17:59:29.839 INFO kablam! 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); Oct 10 17:59:29.839 INFO kablam! | ^^^^^^^^^^^^^^^^^^^^^^^ Oct 10 17:59:29.839 INFO kablam! Oct 10 17:59:29.839 INFO kablam! warning: method `lowest_deltaG` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:29.840 INFO kablam! --> src/main.rs:320:2 Oct 10 17:59:29.840 INFO kablam! | Oct 10 17:59:29.840 INFO kablam! 320 | fn lowest_deltaG(&self) -> f64 { Oct 10 17:59:29.840 INFO kablam! | _____^ Oct 10 17:59:29.840 INFO kablam! 321 | | let mut lowestDeltaG = 0.0; Oct 10 17:59:29.840 INFO kablam! 322 | | for i in 0..(self.template.len() - self.oligo.len()) { Oct 10 17:59:29.840 INFO kablam! 323 | | let template_piece = self.template[i..(self.oligo.len()+i)].to_string(); Oct 10 17:59:29.840 INFO kablam! ... | Oct 10 17:59:29.840 INFO kablam! 329 | | lowestDeltaG Oct 10 17:59:29.840 INFO kablam! 330 | | } Oct 10 17:59:29.840 INFO kablam! | |_____^ Oct 10 17:59:29.840 INFO kablam! Oct 10 17:59:29.840 INFO kablam! warning: variable `lowestDeltaG` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:29.840 INFO kablam! --> src/main.rs:321:7 Oct 10 17:59:29.840 INFO kablam! | Oct 10 17:59:29.840 INFO kablam! 321 | let mut lowestDeltaG = 0.0; Oct 10 17:59:29.840 INFO kablam! | ^^^^^^^^^^^^^^^^ Oct 10 17:59:29.840 INFO kablam! Oct 10 17:59:29.840 INFO kablam! warning: variable `currentDeltaG` should have a snake case name such as `current_delta_g` Oct 10 17:59:29.840 INFO kablam! --> src/main.rs:324:8 Oct 10 17:59:29.840 INFO kablam! | Oct 10 17:59:29.840 INFO kablam! 324 | let currentDeltaG = self.calc_deltaG(template_piece); Oct 10 17:59:29.840 INFO kablam! | ^^^^^^^^^^^^^ Oct 10 17:59:29.840 INFO kablam! Oct 10 17:59:29.840 INFO kablam! warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:29.840 INFO kablam! --> src/main.rs:339:6 Oct 10 17:59:29.840 INFO kablam! | Oct 10 17:59:29.840 INFO kablam! 339 | let lowest_delta_G = simulation.lowest_deltaG(); Oct 10 17:59:29.840 INFO kablam! | ^^^^^^^^^^^^^^ Oct 10 17:59:29.840 INFO kablam! Oct 10 17:59:29.840 INFO kablam! warning: variable `lowest_delta_G` should have a snake case name such as `lowest_delta_g` Oct 10 17:59:29.840 INFO kablam! --> src/main.rs:354:7 Oct 10 17:59:29.840 INFO kablam! | Oct 10 17:59:29.840 INFO kablam! 354 | let lowest_delta_G = simulation.lowest_deltaG(); Oct 10 17:59:29.840 INFO kablam! | ^^^^^^^^^^^^^^ Oct 10 17:59:29.840 INFO kablam! Oct 10 17:59:30.905 INFO kablam! Finished dev [unoptimized + debuginfo] target(s) in 2.00s Oct 10 17:59:30.908 INFO kablam! su: No module specific data is present Oct 10 17:59:32.177 INFO running `"docker" "rm" "-f" "f555152a3496233d9aaff0a061b7fa1f5b61a5b70302d0e8858a2ab70d7faba5"` Oct 10 17:59:32.492 INFO blam! f555152a3496233d9aaff0a061b7fa1f5b61a5b70302d0e8858a2ab70d7faba5 Oct 10 17:59:32.504 INFO running: cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen Oct 10 17:59:32.506 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/test-source/worker-2/rustdoc-test-static-cling/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling/worker-2/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-m" "1536M" "--network" "none" "crater"` Oct 10 17:59:33.055 INFO blam! d1bb2fdf37b206d8d09bcbcf26d681804e547469208d3835b9a769c5b09ebdc0 Oct 10 17:59:33.056 INFO running `"docker" "start" "-a" "d1bb2fdf37b206d8d09bcbcf26d681804e547469208d3835b9a769c5b09ebdc0"` Oct 10 17:59:34.532 INFO kablam! usermod: no changes Oct 10 17:59:34.600 INFO kablam! Finished dev [unoptimized + debuginfo] target(s) in 0.02s Oct 10 17:59:34.608 INFO kablam! Running /target/debug/deps/anneal_predictor-985b83ffdb42e24e Oct 10 17:59:34.609 INFO blam! Oct 10 17:59:34.609 INFO blam! running 1 test Oct 10 17:59:34.644 INFO kablam! error: test failed, to rerun pass '--bin anneal_predictor' Oct 10 17:59:34.645 INFO blam! test tests::known_example ... FAILED Oct 10 17:59:34.645 INFO kablam! su: No module specific data is present Oct 10 17:59:34.645 INFO blam! Oct 10 17:59:34.646 INFO blam! failures: Oct 10 17:59:34.646 INFO blam! Oct 10 17:59:34.646 INFO blam! ---- tests::known_example stdout ---- Oct 10 17:59:34.646 INFO blam! template piece: "CGTTGA" Oct 10 17:59:34.646 INFO blam! thread 'tests::known_example' panicked at 'assertion failed: lowest_delta_G <= acceptable_range.start && Oct 10 17:59:34.647 INFO blam! lowest_delta_G > acceptable_range.end', src/main.rs:356:3 Oct 10 17:59:34.647 INFO blam! stack backtrace: Oct 10 17:59:34.647 INFO blam! 0: 0x55aa6980c30e - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h52ace5b3d4e95617 Oct 10 17:59:34.647 INFO blam! at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Oct 10 17:59:34.648 INFO blam! 1: 0x55aa698151b6 - std::sys_common::backtrace::print::h6cfc8a66009c1cc9 Oct 10 17:59:34.648 INFO blam! at libstd/sys_common/backtrace.rs:71 Oct 10 17:59:34.648 INFO blam! at libstd/sys_common/backtrace.rs:59 Oct 10 17:59:34.648 INFO blam! 2: 0x55aa6980ff0d - std::panicking::default_hook::{{closure}}::h47bedf778bf88480 Oct 10 17:59:34.649 INFO blam! at libstd/panicking.rs:211 Oct 10 17:59:34.649 INFO blam! 3: 0x55aa6980fc1b - std::panicking::default_hook::h1ef46fa7cd894809 Oct 10 17:59:34.649 INFO blam! at libstd/panicking.rs:221 Oct 10 17:59:34.650 INFO blam! 4: 0x55aa698105bc - std::panicking::rust_panic_with_hook::h05510fde8841c579 Oct 10 17:59:34.650 INFO blam! at libstd/panicking.rs:476 Oct 10 17:59:34.650 INFO blam! 5: 0x55aa697bbfcf - std::panicking::begin_panic::hf4fb389baf2949ca Oct 10 17:59:34.650 INFO blam! at libstd/panicking.rs:410 Oct 10 17:59:34.651 INFO blam! 6: 0x55aa697bdd40 - anneal_predictor::tests::known_example::h5c797e6dc7b874e4 Oct 10 17:59:34.651 INFO blam! at src/main.rs:356 Oct 10 17:59:34.651 INFO blam! 7: 0x55aa697bdb89 - anneal_predictor::tests::known_example::{{closure}}::h22d625b4649cab49 Oct 10 17:59:34.651 INFO blam! at src/main.rs:349 Oct 10 17:59:34.652 INFO blam! 8: 0x55aa697bc2ad - core::ops::function::FnOnce::call_once::h718ebb527cb5e84b Oct 10 17:59:34.652 INFO blam! at libcore/ops/function.rs:238 Oct 10 17:59:34.652 INFO blam! 9: 0x55aa697c328e - >::call_box::h95b7cb918af67b5d Oct 10 17:59:34.653 INFO blam! at libtest/lib.rs:1468 Oct 10 17:59:34.653 INFO blam! at libcore/ops/function.rs:238 Oct 10 17:59:34.653 INFO blam! at liballoc/boxed.rs:672 Oct 10 17:59:34.653 INFO blam! 10: 0x55aa69820389 - __rust_maybe_catch_panic Oct 10 17:59:34.654 INFO blam! at libpanic_unwind/lib.rs:102 Oct 10 17:59:34.654 INFO blam! 11: 0x55aa697e3ddd - std::sys_common::backtrace::__rust_begin_short_backtrace::he1120aab928e481f Oct 10 17:59:34.654 INFO blam! at libstd/panicking.rs:289 Oct 10 17:59:34.654 INFO blam! at libstd/panic.rs:392 Oct 10 17:59:34.655 INFO blam! at libtest/lib.rs:1423 Oct 10 17:59:34.655 INFO blam! at libstd/sys_common/backtrace.rs:136 Oct 10 17:59:34.655 INFO blam! 12: 0x55aa697e49e4 - std::panicking::try::do_call::ha990a345054c2d63 Oct 10 17:59:34.655 INFO blam! at libstd/thread/mod.rs:409 Oct 10 17:59:34.656 INFO blam! at libstd/panic.rs:313 Oct 10 17:59:34.656 INFO blam! at libstd/panicking.rs:310 Oct 10 17:59:34.656 INFO blam! 13: 0x55aa69820389 - __rust_maybe_catch_panic Oct 10 17:59:34.656 INFO blam! at libpanic_unwind/lib.rs:102 Oct 10 17:59:34.657 INFO blam! 14: 0x55aa697d1fa6 - >::call_box::h96125cb29a9ba44b Oct 10 17:59:34.657 INFO blam! at libstd/panicking.rs:289 Oct 10 17:59:34.657 INFO blam! at libstd/panic.rs:392 Oct 10 17:59:34.657 INFO blam! at libstd/thread/mod.rs:408 Oct 10 17:59:34.658 INFO blam! at liballoc/boxed.rs:672 Oct 10 17:59:34.658 INFO blam! 15: 0x55aa6980e34a - std::sys_common::thread::start_thread::h97c4c5d82028f6b1 Oct 10 17:59:34.658 INFO blam! at liballoc/boxed.rs:682 Oct 10 17:59:34.658 INFO blam! at libstd/sys_common/thread.rs:24 Oct 10 17:59:34.659 INFO blam! 16: 0x55aa69803ad5 - std::sys::unix::thread::Thread::new::thread_start::he7d65efc4dd16886 Oct 10 17:59:34.659 INFO blam! at libstd/sys/unix/thread.rs:90 Oct 10 17:59:34.659 INFO blam! 17: 0x7f98b209a6b9 - start_thread Oct 10 17:59:34.660 INFO blam! 18: 0x7f98b1bba41c - clone Oct 10 17:59:34.660 INFO blam! 19: 0x0 - Oct 10 17:59:34.660 INFO blam! Oct 10 17:59:34.660 INFO blam! Oct 10 17:59:34.661 INFO blam! failures: Oct 10 17:59:34.661 INFO blam! tests::known_example Oct 10 17:59:34.661 INFO blam! Oct 10 17:59:34.662 INFO blam! test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out Oct 10 17:59:34.662 INFO blam! Oct 10 17:59:35.784 INFO running `"docker" "rm" "-f" "d1bb2fdf37b206d8d09bcbcf26d681804e547469208d3835b9a769c5b09ebdc0"` Oct 10 17:59:36.032 INFO blam! d1bb2fdf37b206d8d09bcbcf26d681804e547469208d3835b9a769c5b09ebdc0