Oct 16 06:37:30.588 INFO testing heme-0.3.1 against master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513 for rustdoc-test-static-cling-1
Oct 16 06:37:30.588 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling-1/worker-6/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/test-source/worker-6/rustdoc-test-static-cling-1/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Oct 16 06:37:31.167 INFO blam! 233fedb833e1778fe1e96cfbfb70b3b42704105a710155a7b1657e95d213443e
Oct 16 06:37:31.169 INFO running `"docker" "start" "-a" "233fedb833e1778fe1e96cfbfb70b3b42704105a710155a7b1657e95d213443e"`
Oct 16 06:37:32.822 INFO kablam! usermod: no changes
Oct 16 06:37:32.849 INFO kablam!    Compiling heme v0.3.1 (/source)
Oct 16 06:37:33.319 INFO kablam! warning: unused import: `std::collections::HashMap`
Oct 16 06:37:33.319 INFO kablam!  --> src/sampling.rs:1:5
Oct 16 06:37:33.319 INFO kablam!   |
Oct 16 06:37:33.319 INFO kablam! 1 | use std::collections::HashMap; 
Oct 16 06:37:33.319 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Oct 16 06:37:33.319 INFO kablam!   |
Oct 16 06:37:33.319 INFO kablam!   = note: #[warn(unused_imports)] on by default
Oct 16 06:37:33.319 INFO kablam! 
Oct 16 06:37:33.375 INFO kablam! warning: unused variable: `protocol_name`
Oct 16 06:37:33.375 INFO kablam!   --> src/sampling.rs:20:21
Oct 16 06:37:33.375 INFO kablam!    |
Oct 16 06:37:33.375 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Oct 16 06:37:33.375 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Oct 16 06:37:33.375 INFO kablam!    |
Oct 16 06:37:33.375 INFO kablam!    = note: #[warn(unused_variables)] on by default
Oct 16 06:37:33.375 INFO kablam! 
Oct 16 06:37:33.375 INFO kablam! warning: unused variable: `a1`
Oct 16 06:37:33.375 INFO kablam!   --> src/scoring.rs:24:39
Oct 16 06:37:33.375 INFO kablam!    |
Oct 16 06:37:33.375 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Oct 16 06:37:33.375 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Oct 16 06:37:33.375 INFO kablam! 
Oct 16 06:37:33.375 INFO kablam! warning: unused variable: `a2`
Oct 16 06:37:33.375 INFO kablam!   --> src/scoring.rs:24:50
Oct 16 06:37:33.375 INFO kablam!    |
Oct 16 06:37:33.375 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Oct 16 06:37:33.375 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Oct 16 06:37:33.375 INFO kablam! 
Oct 16 06:37:33.386 INFO kablam! warning: field is never used: `atoms`
Oct 16 06:37:33.386 INFO kablam!   --> src/conformation.rs:52:5
Oct 16 06:37:33.386 INFO kablam!    |
Oct 16 06:37:33.386 INFO kablam! 52 |     atoms: Vec<Atom>,
Oct 16 06:37:33.386 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Oct 16 06:37:33.386 INFO kablam!    |
Oct 16 06:37:33.386 INFO kablam!    = note: #[warn(dead_code)] on by default
Oct 16 06:37:33.386 INFO kablam! 
Oct 16 06:37:33.386 INFO kablam! warning: field is never used: `residue_name`
Oct 16 06:37:33.386 INFO kablam!   --> src/conformation.rs:53:5
Oct 16 06:37:33.386 INFO kablam!    |
Oct 16 06:37:33.386 INFO kablam! 53 |     residue_name: String,
Oct 16 06:37:33.386 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Oct 16 06:37:33.386 INFO kablam! 
Oct 16 06:37:33.388 INFO kablam! warning: field is never used: `residue_index`
Oct 16 06:37:33.388 INFO kablam!   --> src/conformation.rs:54:5
Oct 16 06:37:33.388 INFO kablam!    |
Oct 16 06:37:33.388 INFO kablam! 54 |     residue_index: i32,
Oct 16 06:37:33.388 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Oct 16 06:37:33.388 INFO kablam! 
Oct 16 06:37:34.452 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 1.61s
Oct 16 06:37:34.454 INFO kablam! su: No module specific data is present
Oct 16 06:37:34.867 INFO running `"docker" "rm" "-f" "233fedb833e1778fe1e96cfbfb70b3b42704105a710155a7b1657e95d213443e"`
Oct 16 06:37:35.187 INFO blam! 233fedb833e1778fe1e96cfbfb70b3b42704105a710155a7b1657e95d213443e
Oct 16 06:37:35.191 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling-1/worker-6/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/test-source/worker-6/rustdoc-test-static-cling-1/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Oct 16 06:37:35.696 INFO blam! ee2e6c9603337ca9a87440326070280785e39ea9a2e0ae803a4c0fc3af793654
Oct 16 06:37:35.698 INFO running `"docker" "start" "-a" "ee2e6c9603337ca9a87440326070280785e39ea9a2e0ae803a4c0fc3af793654"`
Oct 16 06:37:37.254 INFO kablam! usermod: no changes
Oct 16 06:37:37.320 INFO kablam!    Compiling heme v0.3.1 (/source)
Oct 16 06:37:38.035 INFO kablam! warning: unused import: `std::collections::HashMap`
Oct 16 06:37:38.036 INFO kablam!  --> src/sampling.rs:1:5
Oct 16 06:37:38.036 INFO kablam!   |
Oct 16 06:37:38.036 INFO kablam! 1 | use std::collections::HashMap; 
Oct 16 06:37:38.037 INFO kablam!   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
Oct 16 06:37:38.037 INFO kablam!   |
Oct 16 06:37:38.037 INFO kablam!   = note: #[warn(unused_imports)] on by default
Oct 16 06:37:38.038 INFO kablam! 
Oct 16 06:37:38.147 INFO kablam! warning: unused variable: `protocol_name`
Oct 16 06:37:38.147 INFO kablam!   --> src/sampling.rs:20:21
Oct 16 06:37:38.148 INFO kablam!    |
Oct 16 06:37:38.148 INFO kablam! 20 | pub fn get_protocol(protocol_name: &str) -> Protocol {
Oct 16 06:37:38.149 INFO kablam!    |                     ^^^^^^^^^^^^^ help: consider using `_protocol_name` instead
Oct 16 06:37:38.149 INFO kablam!    |
Oct 16 06:37:38.149 INFO kablam!    = note: #[warn(unused_variables)] on by default
Oct 16 06:37:38.150 INFO kablam! 
Oct 16 06:37:38.150 INFO kablam! warning: unused variable: `a1`
Oct 16 06:37:38.150 INFO kablam!   --> src/scoring.rs:24:39
Oct 16 06:37:38.150 INFO kablam!    |
Oct 16 06:37:38.151 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Oct 16 06:37:38.151 INFO kablam!    |                                       ^^ help: consider using `_a1` instead
Oct 16 06:37:38.152 INFO kablam! 
Oct 16 06:37:38.152 INFO kablam! warning: unused variable: `a2`
Oct 16 06:37:38.152 INFO kablam!   --> src/scoring.rs:24:50
Oct 16 06:37:38.152 INFO kablam!    |
Oct 16 06:37:38.153 INFO kablam! 24 | pub fn calculate_lennard_jones_energy(a1: &Atom, a2: &Atom, r: f64) -> f64 {
Oct 16 06:37:38.153 INFO kablam!    |                                                  ^^ help: consider using `_a2` instead
Oct 16 06:37:38.153 INFO kablam! 
Oct 16 06:37:38.167 INFO kablam! warning: field is never used: `atoms`
Oct 16 06:37:38.167 INFO kablam!   --> src/conformation.rs:52:5
Oct 16 06:37:38.168 INFO kablam!    |
Oct 16 06:37:38.168 INFO kablam! 52 |     atoms: Vec<Atom>,
Oct 16 06:37:38.168 INFO kablam!    |     ^^^^^^^^^^^^^^^^
Oct 16 06:37:38.169 INFO kablam!    |
Oct 16 06:37:38.169 INFO kablam!    = note: #[warn(dead_code)] on by default
Oct 16 06:37:38.169 INFO kablam! 
Oct 16 06:37:38.170 INFO kablam! warning: field is never used: `residue_name`
Oct 16 06:37:38.170 INFO kablam!   --> src/conformation.rs:53:5
Oct 16 06:37:38.170 INFO kablam!    |
Oct 16 06:37:38.171 INFO kablam! 53 |     residue_name: String,
Oct 16 06:37:38.171 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^^^
Oct 16 06:37:38.171 INFO kablam! 
Oct 16 06:37:38.172 INFO kablam! warning: field is never used: `residue_index`
Oct 16 06:37:38.172 INFO kablam!   --> src/conformation.rs:54:5
Oct 16 06:37:38.172 INFO kablam!    |
Oct 16 06:37:38.173 INFO kablam! 54 |     residue_index: i32,
Oct 16 06:37:38.173 INFO kablam!    |     ^^^^^^^^^^^^^^^^^^
Oct 16 06:37:38.173 INFO kablam! 
Oct 16 06:37:38.179 INFO kablam! warning: function `H` should have a snake case name such as `h`
Oct 16 06:37:38.179 INFO kablam!    --> src/io.rs:152:9
Oct 16 06:37:38.179 INFO kablam!     |
Oct 16 06:37:38.180 INFO kablam! 152 | /         fn H(l: &f64) -> f64 {
Oct 16 06:37:38.180 INFO kablam! 153 | |
Oct 16 06:37:38.180 INFO kablam! 154 | |             // bounds of N choose lN
Oct 16 06:37:38.180 INFO kablam! 155 | |             // can be found by 2^(n*H(l))
Oct 16 06:37:38.180 INFO kablam! ...   |
Oct 16 06:37:38.180 INFO kablam! 161 | |             l.ln() - value * value.ln()
Oct 16 06:37:38.180 INFO kablam! 162 | |         }
Oct 16 06:37:38.180 INFO kablam!     | |_________^
Oct 16 06:37:38.183 INFO kablam!     |
Oct 16 06:37:38.183 INFO kablam!     = note: #[warn(non_snake_case)] on by default
Oct 16 06:37:38.183 INFO kablam! 
Oct 16 06:37:38.904 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 1.61s
Oct 16 06:37:38.907 INFO kablam! su: No module specific data is present
Oct 16 06:37:39.452 INFO running `"docker" "rm" "-f" "ee2e6c9603337ca9a87440326070280785e39ea9a2e0ae803a4c0fc3af793654"`
Oct 16 06:37:39.531 INFO blam! ee2e6c9603337ca9a87440326070280785e39ea9a2e0ae803a4c0fc3af793654
Oct 16 06:37:39.537 INFO running `"docker" "create" "-v" "/mnt/big/crater/./work/local/target-dirs/rustdoc-test-static-cling-1/worker-6/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/target:rw,Z" "-v" "/mnt/big/crater/./work/local/test-source/worker-6/rustdoc-test-static-cling-1/master#0e07c4281c343e9e15a0a8fca79538ad1a8eb513:/source:ro,Z" "-v" "/mnt/big/crater/./work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/./work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +0e07c4281c343e9e15a0a8fca79538ad1a8eb513-alt test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Oct 16 06:37:39.760 INFO blam! 80e70dbcff96b19cbe4958dd5672007ff675f8a47a0f323ea21cd12d7e0fa044
Oct 16 06:37:39.762 INFO running `"docker" "start" "-a" "80e70dbcff96b19cbe4958dd5672007ff675f8a47a0f323ea21cd12d7e0fa044"`
Oct 16 06:37:40.164 INFO kablam! usermod: no changes
Oct 16 06:37:40.198 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 0.01s
Oct 16 06:37:40.200 INFO kablam!      Running /target/debug/deps/heme-16d9455d8acde155
Oct 16 06:37:40.200 INFO blam! 
Oct 16 06:37:40.200 INFO blam! running 4 tests
Oct 16 06:37:40.200 INFO blam! test io::tests::test_entropy_function ... ok
Oct 16 06:37:40.201 INFO blam! test io::tests::test_lennard_jones_atom_loading ... ok
Oct 16 06:37:40.201 INFO blam! test io::tests::test_new_atoms_testy ... ok
Oct 16 06:37:40.201 INFO blam! test io::tests::test_pdb_parsing ... ok
Oct 16 06:37:40.201 INFO blam! 
Oct 16 06:37:40.201 INFO blam! test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Oct 16 06:37:40.201 INFO blam! 
Oct 16 06:37:40.201 INFO kablam!      Running /target/debug/deps/heme-02128be64117d3be
Oct 16 06:37:40.202 INFO blam! 
Oct 16 06:37:40.202 INFO blam! running 0 tests
Oct 16 06:37:40.202 INFO blam! 
Oct 16 06:37:40.202 INFO blam! test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Oct 16 06:37:40.202 INFO blam! 
Oct 16 06:37:40.203 INFO kablam!    Doc-tests heme
Oct 16 06:37:40.949 INFO blam! 
Oct 16 06:37:40.949 INFO blam! running 1 test
Oct 16 06:37:41.742 INFO blam! test src/conformation.rs - conformation::XYZ (line 18) ... ok
Oct 16 06:37:41.743 INFO blam! 
Oct 16 06:37:41.743 INFO blam! test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Oct 16 06:37:41.743 INFO blam! 
Oct 16 06:37:41.751 INFO kablam! su: No module specific data is present
Oct 16 06:37:42.127 INFO running `"docker" "rm" "-f" "80e70dbcff96b19cbe4958dd5672007ff675f8a47a0f323ea21cd12d7e0fa044"`
Oct 16 06:37:42.361 INFO blam! 80e70dbcff96b19cbe4958dd5672007ff675f8a47a0f323ea21cd12d7e0fa044