[INFO] fetching crate openbabel-sys 0.5.3+openbabel-3.1.1...
[INFO] testing openbabel-sys-0.5.3+openbabel-3.1.1 against nightly-2024-10-28+rustflags=-Zrandomize-layout for randomize-layout
[INFO] extracting crate openbabel-sys 0.5.3+openbabel-3.1.1 into /workspace/builds/worker-1-tc2/source
[INFO] validating manifest of crates.io crate openbabel-sys 0.5.3+openbabel-3.1.1 on toolchain nightly-2024-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openbabel-sys 0.5.3+openbabel-3.1.1
[INFO] finished tweaking crates.io crate openbabel-sys 0.5.3+openbabel-3.1.1
[INFO] tweaked toml for crates.io crate openbabel-sys 0.5.3+openbabel-3.1.1 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 37 packages to latest compatible versions
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3054d2ec83bc1f5ae04d35e01c9e2231bf0d9265dd0bb1bd30e2014e4fec8ba9
[INFO] running `Command { std: "docker" "start" "-a" "3054d2ec83bc1f5ae04d35e01c9e2231bf0d9265dd0bb1bd30e2014e4fec8ba9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3054d2ec83bc1f5ae04d35e01c9e2231bf0d9265dd0bb1bd30e2014e4fec8ba9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3054d2ec83bc1f5ae04d35e01c9e2231bf0d9265dd0bb1bd30e2014e4fec8ba9", kill_on_drop: false }`
[INFO] [stdout] 3054d2ec83bc1f5ae04d35e01c9e2231bf0d9265dd0bb1bd30e2014e4fec8ba9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 449a335cbbbad0e6041975f4a1f69df63583e25eeca6d7a605c4c6f37fd85c27
[INFO] running `Command { std: "docker" "start" "-a" "449a335cbbbad0e6041975f4a1f69df63583e25eeca6d7a605c4c6f37fd85c27", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.89
[INFO] [stderr]    Compiling scratch v1.0.7
[INFO] [stderr]    Compiling cxxbridge-flags v1.0.129
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling unicode-width v0.1.14
[INFO] [stderr]    Compiling once_cell v1.20.2
[INFO] [stderr]    Compiling fs_extra v1.3.0
[INFO] [stderr]    Compiling link-cplusplus v1.0.9
[INFO] [stderr]    Compiling cxx v1.0.129
[INFO] [stderr]    Compiling codespan-reporting v0.11.1
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling syn v2.0.86
[INFO] [stderr]    Compiling cxx-build v1.0.129
[INFO] [stderr]    Compiling cxxbridge-macro v1.0.129
[INFO] [stderr]    Compiling openbabel-sys v0.5.3+openbabel-3.1.1 (/opt/rustwide/workdir)
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 48s
[INFO] running `Command { std: "docker" "inspect" "449a335cbbbad0e6041975f4a1f69df63583e25eeca6d7a605c4c6f37fd85c27", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "449a335cbbbad0e6041975f4a1f69df63583e25eeca6d7a605c4c6f37fd85c27", kill_on_drop: false }`
[INFO] [stdout] 449a335cbbbad0e6041975f4a1f69df63583e25eeca6d7a605c4c6f37fd85c27
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 23611925da9bbdb7d207f9574f60cc4f296853f218e558422e8c1b1bbf4d0b46
[INFO] running `Command { std: "docker" "start" "-a" "23611925da9bbdb7d207f9574f60cc4f296853f218e558422e8c1b1bbf4d0b46", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustix v0.38.38
[INFO] [stderr]    Compiling fastrand v2.1.1
[INFO] [stderr]    Compiling cxx-build v1.0.129
[INFO] [stderr]    Compiling tempfile v3.13.0
[INFO] [stderr]    Compiling openbabel-sys v0.5.3+openbabel-3.1.1 (/opt/rustwide/workdir)
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1m 27s
[INFO] running `Command { std: "docker" "inspect" "23611925da9bbdb7d207f9574f60cc4f296853f218e558422e8c1b1bbf4d0b46", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "23611925da9bbdb7d207f9574f60cc4f296853f218e558422e8c1b1bbf4d0b46", kill_on_drop: false }`
[INFO] [stdout] 23611925da9bbdb7d207f9574f60cc4f296853f218e558422e8c1b1bbf4d0b46
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 9c683a2eb4c820e604e7e6e8d388a8af944a566c457a4f11ae608f863152b298
[INFO] running `Command { std: "docker" "start" "-a" "9c683a2eb4c820e604e7e6e8d388a8af944a566c457a4f11ae608f863152b298", kill_on_drop: false }`
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.3+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/openbabel_sys-192d270e25ed12e5)
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open parameter file
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open parameter file
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open UFF.prm
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in SetTypes
[INFO] [stderr]   Cannot open UFF.prm
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ReadPatternFile
[INFO] [stderr]   Cannot open patterns.txt
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ReadPatternFile
[INFO] [stderr]   Cannot open SMARTS_InteLigand.txt
[INFO] [stderr] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/deps/openbabel_sys-192d270e25ed12e5` (signal: 11, SIGSEGV: invalid memory reference)
[INFO] running `Command { std: "docker" "inspect" "9c683a2eb4c820e604e7e6e8d388a8af944a566c457a4f11ae608f863152b298", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9c683a2eb4c820e604e7e6e8d388a8af944a566c457a4f11ae608f863152b298", kill_on_drop: false }`
[INFO] [stdout] 9c683a2eb4c820e604e7e6e8d388a8af944a566c457a4f11ae608f863152b298
