[INFO] fetching crate mzdeisotope 0.2.1...
[INFO] testing mzdeisotope-0.2.1 against nightly-2024-10-28 for randomize-layout
[INFO] extracting crate mzdeisotope 0.2.1 into /workspace/builds/worker-7-tc1/source
[INFO] validating manifest of crates.io crate mzdeisotope 0.2.1 on toolchain nightly-2024-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate mzdeisotope 0.2.1
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate mzdeisotope 0.2.1
[INFO] tweaked toml for crates.io crate mzdeisotope 0.2.1 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] crate crates.io crate mzdeisotope 0.2.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded mzpeaks v0.22.0
[INFO] [stderr]   Downloaded identity-hash v0.1.0
[INFO] [stderr]   Downloaded serde_json v1.0.129
[INFO] [stderr]   Downloaded chemical_elements v0.4.0
[INFO] [stderr]   Downloaded mzsignal v0.25.0
[INFO] [stderr]   Downloaded nalgebra v0.33.1
[INFO] [stderr]   Downloaded mzdata v0.33.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4e2a2f2d34ca8cbe53a92cdcbb6eda4faf77180e74922c9d94c1653a460769c1
[INFO] running `Command { std: "docker" "start" "-a" "4e2a2f2d34ca8cbe53a92cdcbb6eda4faf77180e74922c9d94c1653a460769c1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4e2a2f2d34ca8cbe53a92cdcbb6eda4faf77180e74922c9d94c1653a460769c1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4e2a2f2d34ca8cbe53a92cdcbb6eda4faf77180e74922c9d94c1653a460769c1", kill_on_drop: false }`
[INFO] [stdout] 4e2a2f2d34ca8cbe53a92cdcbb6eda4faf77180e74922c9d94c1653a460769c1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4d6c553157feb11c4d3c9aae561ce8094d4ba3bcdc141f9dfb0ed3405ff06f14
[INFO] running `Command { std: "docker" "start" "-a" "4d6c553157feb11c4d3c9aae561ce8094d4ba3bcdc141f9dfb0ed3405ff06f14", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.88
[INFO] [stderr]    Compiling serde v1.0.210
[INFO] [stderr]    Compiling bytemuck v1.19.0
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling thiserror v1.0.64
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling safe_arch v0.7.2
[INFO] [stderr]    Compiling mzpeaks v0.22.0
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling adler2 v2.0.0
[INFO] [stderr]    Compiling wide v0.7.28
[INFO] [stderr]    Compiling serde_json v1.0.129
[INFO] [stderr]    Compiling miniz_oxide v0.8.0
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling block-buffer v0.10.4
[INFO] [stderr]    Compiling crypto-common v0.1.6
[INFO] [stderr]    Compiling digest v0.10.7
[INFO] [stderr]    Compiling syn v2.0.79
[INFO] [stderr]    Compiling regex-automata v0.4.8
[INFO] [stderr]    Compiling crc32fast v1.4.2
[INFO] [stderr]    Compiling hashbrown v0.15.0
[INFO] [stderr]    Compiling vsimd v0.8.0
[INFO] [stderr]    Compiling log v0.4.22
[INFO] [stderr]    Compiling outref v0.5.1
[INFO] [stderr]    Compiling sha1 v0.10.6
[INFO] [stderr]    Compiling base64-simd v0.8.0
[INFO] [stderr]    Compiling tracing-core v0.1.32
[INFO] [stderr]    Compiling chrono v0.4.38
[INFO] [stderr]    Compiling flate2 v1.0.34
[INFO] [stderr]    Compiling simba v0.9.0
[INFO] [stderr]    Compiling md5 v0.7.0
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]    Compiling base16ct v0.2.0
[INFO] [stderr]    Compiling pin-project-lite v0.2.14
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling identity-hash v0.1.0
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling regex v1.11.0
[INFO] [stderr]    Compiling darling_core v0.20.10
[INFO] [stderr]    Compiling serde_derive v1.0.210
[INFO] [stderr]    Compiling thiserror-impl v1.0.64
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling tracing-attributes v0.1.27
[INFO] [stderr]    Compiling tracing v0.1.40
[INFO] [stderr]    Compiling darling_macro v0.20.10
[INFO] [stderr]    Compiling darling v0.20.10
[INFO] [stderr]    Compiling serde_with_macros v3.11.0
[INFO] [stderr]    Compiling nalgebra v0.33.1
[INFO] [stderr]    Compiling quick-xml v0.30.0
[INFO] [stderr]    Compiling serde_with v3.11.0
[INFO] [stderr]    Compiling indexmap v2.6.0
[INFO] [stderr]    Compiling chemical_elements v0.4.0
[INFO] [stderr]    Compiling mzsignal v0.25.0
[INFO] [stderr]    Compiling mzdata v0.33.0
[INFO] [stderr]    Compiling mzdeisotope v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 28.94s
[INFO] running `Command { std: "docker" "inspect" "4d6c553157feb11c4d3c9aae561ce8094d4ba3bcdc141f9dfb0ed3405ff06f14", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4d6c553157feb11c4d3c9aae561ce8094d4ba3bcdc141f9dfb0ed3405ff06f14", kill_on_drop: false }`
[INFO] [stdout] 4d6c553157feb11c4d3c9aae561ce8094d4ba3bcdc141f9dfb0ed3405ff06f14
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 81d19b56657d7ab2d6625b2467f3cdcb26810f59c2f04d3777fd2492e2689301
[INFO] running `Command { std: "docker" "start" "-a" "81d19b56657d7ab2d6625b2467f3cdcb26810f59c2f04d3777fd2492e2689301", kill_on_drop: false }`
[INFO] [stderr]    Compiling tracing-core v0.1.32
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]    Compiling anstyle v1.0.8
[INFO] [stderr]    Compiling colorchoice v1.0.2
[INFO] [stderr]    Compiling overload v0.1.1
[INFO] [stderr]    Compiling anstyle-query v1.1.1
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.1
[INFO] [stderr]    Compiling nu-ansi-term v0.46.0
[INFO] [stderr]    Compiling mzsignal v0.25.0
[INFO] [stderr]    Compiling anstyle-parse v0.2.5
[INFO] [stderr]    Compiling sharded-slab v0.1.7
[INFO] [stderr]    Compiling thread_local v1.1.8
[INFO] [stderr]    Compiling anstream v0.6.15
[INFO] [stderr]    Compiling env_filter v0.1.2
[INFO] [stderr]    Compiling smallvec v1.13.2
[INFO] [stderr]    Compiling tracing v0.1.40
[INFO] [stderr]    Compiling tracing-log v0.2.0
[INFO] [stderr]    Compiling env_logger v0.11.5
[INFO] [stderr]    Compiling test-log-macros v0.2.16
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling mzdata v0.33.0
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling matchers v0.1.0
[INFO] [stderr]    Compiling tracing-subscriber v0.3.18
[INFO] [stderr]    Compiling test-log v0.2.16
[INFO] [stderr]    Compiling mzdeisotope v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 8.24s
[INFO] running `Command { std: "docker" "inspect" "81d19b56657d7ab2d6625b2467f3cdcb26810f59c2f04d3777fd2492e2689301", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "81d19b56657d7ab2d6625b2467f3cdcb26810f59c2f04d3777fd2492e2689301", kill_on_drop: false }`
[INFO] [stdout] 81d19b56657d7ab2d6625b2467f3cdcb26810f59c2f04d3777fd2492e2689301
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 9d467c4c02ce1919f557e2750887f5a9b0b6f3ebc3a8bb19bdf6e9db22475eab
[INFO] running `Command { std: "docker" "start" "-a" "9d467c4c02ce1919f557e2750887f5a9b0b6f3ebc3a8bb19bdf6e9db22475eab", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.07s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mzdeisotope-6460c044af2bab54)
[INFO] [stdout] 
[INFO] [stdout] running 16 tests
[INFO] [stdout] test charge::test::test_quick_charge ... FAILED
[INFO] [stdout] test deconvoluter::test::test_file_step ... FAILED
[INFO] [stdout] test deconvoluter::test::test_file_graph_step ... FAILED
[INFO] [stdout] test deconvoluter::test::test_full_process ... FAILED
[INFO] [stdout] test deconvoluter::test::test_full_process_quick_charge ... FAILED
[INFO] [stdout] test multi_model_deconvoluters::test::test_file_step ... FAILED
[INFO] [stdout] test isotopic_model::test::test_cache_key ... ok
[INFO] [stdout] test isotopic_model::test::test_mz_truncation ... ok
[INFO] [stdout] test deconvoluter::test::test_fit_all ... ok
[INFO] [stdout] test isotopic_model::test::test_tid_cached ... ok
[INFO] [stdout] test scorer::test::test_gtest ... ok
[INFO] [stdout] test deconvoluter::test::test_mut ... ok
[INFO] [stdout] test scorer::test::test_msdeconv ... ok
[INFO] [stdout] test scorer::test::test_scaled_gtest ... ok
[INFO] [stdout] test isotopic_model::test::test_tid ... ok
[INFO] [stdout] test isotopic_model::test::test_mono_to_base ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- charge::test::test_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_graph_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- multi_model_deconvoluters::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     charge::test::test_quick_charge
[INFO] [stdout]     deconvoluter::test::test_file_graph_step
[INFO] [stdout]     deconvoluter::test::test_file_step
[INFO] [stdout]     deconvoluter::test::test_full_process
[INFO] [stdout]     deconvoluter::test::test_full_process_quick_charge
[INFO] [stdout]     multi_model_deconvoluters::test::test_file_step
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 10 passed; 6 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.08s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "9d467c4c02ce1919f557e2750887f5a9b0b6f3ebc3a8bb19bdf6e9db22475eab", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9d467c4c02ce1919f557e2750887f5a9b0b6f3ebc3a8bb19bdf6e9db22475eab", kill_on_drop: false }`
[INFO] [stdout] 9d467c4c02ce1919f557e2750887f5a9b0b6f3ebc3a8bb19bdf6e9db22475eab
