[INFO] cloning repository https://github.com/ban-m/partial_order_alignment
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ban-m/partial_order_alignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b434418447aad843e9267f616a0b609d2da4c38a
[INFO] testing ban-m/partial_order_alignment/b434418447aad843e9267f616a0b609d2da4c38a against nightly-2024-10-28+rustflags=-Zrandomize-layout for randomize-layout
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/ban-m/partial_order_alignment on toolchain nightly-2024-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] finished tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] tweaked toml for git repo https://github.com/ban-m/partial_order_alignment written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 25 packages to latest compatible versions
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 0b6c8b16229ca4d0f4c2bc307729034e94e812daa6ed649cadaa69a312f3c46f
[INFO] running `Command { std: "docker" "start" "-a" "0b6c8b16229ca4d0f4c2bc307729034e94e812daa6ed649cadaa69a312f3c46f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0b6c8b16229ca4d0f4c2bc307729034e94e812daa6ed649cadaa69a312f3c46f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0b6c8b16229ca4d0f4c2bc307729034e94e812daa6ed649cadaa69a312f3c46f", kill_on_drop: false }`
[INFO] [stdout] 0b6c8b16229ca4d0f4c2bc307729034e94e812daa6ed649cadaa69a312f3c46f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a067f80e1638ff2a0cacf8d12edf528752f56c8fe0f6b56ab3ee6f294570109b
[INFO] running `Command { std: "docker" "start" "-a" "a067f80e1638ff2a0cacf8d12edf528752f56c8fe0f6b56ab3ee6f294570109b", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.89
[INFO] [stderr]    Compiling unicode-ident v1.0.13
[INFO] [stderr]    Compiling libc v0.2.161
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling log v0.4.22
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling syn v2.0.87
[INFO] [stderr]    Compiling getrandom v0.2.15
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rand_xoshiro v0.6.0
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling zerocopy v0.7.35
[INFO] [stderr]    Compiling ppv-lite86 v0.2.20
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 5.71s
[INFO] running `Command { std: "docker" "inspect" "a067f80e1638ff2a0cacf8d12edf528752f56c8fe0f6b56ab3ee6f294570109b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a067f80e1638ff2a0cacf8d12edf528752f56c8fe0f6b56ab3ee6f294570109b", kill_on_drop: false }`
[INFO] [stdout] a067f80e1638ff2a0cacf8d12edf528752f56c8fe0f6b56ab3ee6f294570109b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9623f7861d0cb316fa982fed598debecdcc161d41ad7f2796da1df35939f9b17
[INFO] running `Command { std: "docker" "start" "-a" "9623f7861d0cb316fa982fed598debecdcc161d41ad7f2796da1df35939f9b17", kill_on_drop: false }`
[INFO] [stderr]    Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.33s
[INFO] running `Command { std: "docker" "inspect" "9623f7861d0cb316fa982fed598debecdcc161d41ad7f2796da1df35939f9b17", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9623f7861d0cb316fa982fed598debecdcc161d41ad7f2796da1df35939f9b17", kill_on_drop: false }`
[INFO] [stdout] 9623f7861d0cb316fa982fed598debecdcc161d41ad7f2796da1df35939f9b17
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] d7e6cafdce0f58cf465a7c191ac71f6789371015c3b7449049c0e2e5beff164e
[INFO] running `Command { std: "docker" "start" "-a" "d7e6cafdce0f58cf465a7c191ac71f6789371015c3b7449049c0e2e5beff164e", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/poa_hmm-4f49c59b2f5f8ac0)
[INFO] [stdout] 
[INFO] [stdout] running 32 tests
[INFO] [stdout] test base_table::tests::test ... ok
[INFO] [stdout] test tests::tests::abundance_test_prior ... ignored
[INFO] [stdout] test tests::tests::add ... ok
[INFO] [stdout] test tests::tests::create ... ok
[INFO] [stdout] test generate::tests::short_consensus ... ok
[INFO] [stdout] test tests::tests::deletion_test_banded ... ok
[INFO] [stdout] test tests::tests::deletion_test ... ok
[INFO] [stdout] test tests::tests::forward ... ok
[INFO] [stdout] test tests::tests::init ... ok
[INFO] [stdout] test tests::tests::it_works ... ok
[INFO] [stdout] test tests::tests::insertion_test ... ok
[INFO] [stdout] test tests::tests::insertion_test_banded ... ok
[INFO] [stdout] test tests::tests::merge_test ... ok
[INFO] [stdout] test tests::tests::mismatch_test ... ok
[INFO] [stdout] test tests::tests::single_error_banded_test ... ignored
[INFO] [stdout] test tests::tests::single_error_ccs_test ... ignored
[INFO] [stdout] test tests::tests::single_error_test ... ignored
[INFO] [stdout] test tests::tests::mismatch_test_banded ... ok
[INFO] [stdout] test tests::tests::initialize ... ok
[INFO] [stdout] test tests::tests::low_coverage_test ... ok
[INFO] [stdout] test tests::tests::forward_check ... ok
[INFO] [stdout] test tests::tests::connectivity_check ... ok
[INFO] [stdout] test generate::tests::long_consensus ... ok
[INFO] [stdout] test generate::tests::short_consensus_rand ... ok
[INFO] [stdout] test tests::tests::alignment_check ... ok
[INFO] [stdout] test tests::tests::hard_test ... ok
[INFO] [stdout] test tests::tests::high_coverage_test ... ok
[INFO] [stdout] test tests::tests::random_check ... ok
[INFO] [stdout] test tests::tests::random_check_forward ... ok
[INFO] [stdout] test tests::tests::mix_test_prior ... ok
[INFO] [stdout] test generate::tests::long_consensus_rand ... ok
[INFO] [stdout] test generate::tests::super_long_consensus_rand has been running for over 60 seconds
[ERROR] error running command: no output for 300 seconds
[INFO] running `Command { std: "docker" "inspect" "d7e6cafdce0f58cf465a7c191ac71f6789371015c3b7449049c0e2e5beff164e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d7e6cafdce0f58cf465a7c191ac71f6789371015c3b7449049c0e2e5beff164e", kill_on_drop: false }`
[INFO] [stdout] d7e6cafdce0f58cf465a7c191ac71f6789371015c3b7449049c0e2e5beff164e
