[INFO] cloning repository https://github.com/Mimerme/Mimerme
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Mimerme/Mimerme" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] df63a69dd00123b2eb2ab3520f84fe54a79a107d
[INFO] testing Mimerme/Mimerme/df63a69dd00123b2eb2ab3520f84fe54a79a107d against nightly-2024-10-28+rustflags=-Zrandomize-layout for randomize-layout
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMimerme%2FMimerme" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Mimerme/Mimerme on toolchain nightly-2024-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] finished tweaking git repo https://github.com/Mimerme/Mimerme
[INFO] tweaked toml for git repo https://github.com/Mimerme/Mimerme written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/Mimerme/Mimerme already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 303f88f991c874246fc95f5a4a347f71408967d91fdd6713682429053affdc49
[INFO] running `Command { std: "docker" "start" "-a" "303f88f991c874246fc95f5a4a347f71408967d91fdd6713682429053affdc49", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "303f88f991c874246fc95f5a4a347f71408967d91fdd6713682429053affdc49", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "303f88f991c874246fc95f5a4a347f71408967d91fdd6713682429053affdc49", kill_on_drop: false }`
[INFO] [stdout] 303f88f991c874246fc95f5a4a347f71408967d91fdd6713682429053affdc49
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2877a33e0c28e6d760d3b6464d80618126d89aef3df2de742dbf6cef014d4cf9
[INFO] running `Command { std: "docker" "start" "-a" "2877a33e0c28e6d760d3b6464d80618126d89aef3df2de742dbf6cef014d4cf9", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.9
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling cc v1.0.50
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling syn v1.0.17
[INFO] [stderr]    Compiling version_check v0.9.1
[INFO] [stderr]    Compiling libc v0.2.68
[INFO] [stderr]    Compiling regex-syntax v0.6.17
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling pkg-config v0.3.17
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bindgen v0.53.2
[INFO] [stderr]    Compiling clang-sys v0.29.2
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling lazycell v1.2.1
[INFO] [stderr]    Compiling serde v1.0.105
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling smallvec v1.2.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling nom v5.1.1
[INFO] [stderr]    Compiling unicode-normalization v0.1.12
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling aho-corasick v0.7.10
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling url v2.1.1
[INFO] [stderr]    Compiling regex v1.3.6
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling serde_derive v1.0.105
[INFO] [stderr]    Compiling snafu-derive v0.6.3
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu v0.6.0
[INFO] [stderr]    Compiling hts-sys v1.10.2
[INFO] [stderr]    Compiling bio-types v0.6.0
[INFO] [stderr]    Compiling bincode v1.2.1
[INFO] [stderr]    Compiling rust-htslib v0.29.0
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread` and `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `add` is never used
[INFO] [stdout]    --> src/main.rs:450:4
[INFO] [stdout]     |
[INFO] [stdout] 450 | fn add(a : &mut Vec<i32>){
[INFO] [stdout]     |    ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `gold` is never used
[INFO] [stdout]    --> src/main.rs:459:4
[INFO] [stdout]     |
[INFO] [stdout] 459 | fn gold() -> (
[INFO] [stdout]     |    ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/main.rs:50:10
[INFO] [stdout]    |
[INFO] [stdout] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stdout]    |          ^--------
[INFO] [stdout]    |          |
[INFO] [stdout]    |          `Serialize` is not local
[INFO] [stdout]    |          move the `impl` block outside of this constant `_IMPL_SERIALIZE_FOR_FmIndex`
[INFO] [stdout] 51 | struct FmIndex {
[INFO] [stdout]    |        ------- `FmIndex` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Serialize` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stdout]    = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/main.rs:50:21
[INFO] [stdout]    |
[INFO] [stdout] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stdout]    |                     ^----------
[INFO] [stdout]    |                     |
[INFO] [stdout]    |                     `Deserialize` is not local
[INFO] [stdout]    |                     move the `impl` block outside of this constant `_IMPL_DESERIALIZE_FOR_FmIndex`
[INFO] [stdout] 51 | struct FmIndex {
[INFO] [stdout]    |        ------- `FmIndex` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Deserialize` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 12.96s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] running `Command { std: "docker" "inspect" "2877a33e0c28e6d760d3b6464d80618126d89aef3df2de742dbf6cef014d4cf9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2877a33e0c28e6d760d3b6464d80618126d89aef3df2de742dbf6cef014d4cf9", kill_on_drop: false }`
[INFO] [stdout] 2877a33e0c28e6d760d3b6464d80618126d89aef3df2de742dbf6cef014d4cf9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2b3f56856241d9416a22c39c089ce26b5dd7844f737b433c8f06fb4e4511d9ae
[INFO] running `Command { std: "docker" "start" "-a" "2b3f56856241d9416a22c39c089ce26b5dd7844f737b433c8f06fb4e4511d9ae", kill_on_drop: false }`
[INFO] [stderr]    Compiling fmmap v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::str::Chars`
[INFO] [stdout]  --> src/main.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::str::Chars;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::iter::Rev`
[INFO] [stdout]  --> src/main.rs:9:5
[INFO] [stdout]   |
[INFO] [stdout] 9 | use std::iter::Rev;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Aux`
[INFO] [stdout]   --> src/main.rs:12:45
[INFO] [stdout]    |
[INFO] [stdout] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stdout]    |                                             ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::convert::TryFrom`
[INFO] [stdout]   --> src/main.rs:14:5
[INFO] [stdout]    |
[INFO] [stdout] 14 | use std::convert::TryFrom;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `thread` and `time`
[INFO] [stdout]   --> src/main.rs:15:11
[INFO] [stdout]    |
[INFO] [stdout] 15 | use std::{thread, time};
[INFO] [stdout]    |           ^^^^^^  ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary trailing semicolon
[INFO] [stdout]    --> src/main.rs:356:3
[INFO] [stdout]     |
[INFO] [stdout] 356 |     };
[INFO] [stdout]     |      ^ help: remove this semicolon
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:110:7
[INFO] [stdout]     |
[INFO] [stdout] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stdout]     |             ----^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seed_pos`
[INFO] [stdout]    --> src/main.rs:392:7
[INFO] [stdout]     |
[INFO] [stdout] 392 |         let seed_pos = 0;
[INFO] [stdout]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `seqs`
[INFO] [stdout]    --> src/main.rs:516:16
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `quals`
[INFO] [stdout]    --> src/main.rs:516:22
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cigars`
[INFO] [stdout]    --> src/main.rs:516:29
[INFO] [stdout]     |
[INFO] [stdout] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stdout]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `name`
[INFO] [stdout]    --> src/main.rs:532:17
[INFO] [stdout]     |
[INFO] [stdout] 532 |             for name in names.iter() {
[INFO] [stdout]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `sam`
[INFO] [stdout]    --> src/main.rs:548:13
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:548:9
[INFO] [stdout]     |
[INFO] [stdout] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stdout]     |         ----^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:659:6
[INFO] [stdout]     |
[INFO] [stdout] 659 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:665:11
[INFO] [stdout]     |
[INFO] [stdout] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                             ----^^^^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:669:11
[INFO] [stdout]     |
[INFO] [stdout] 669 |                         let mut split = sequence.split("\n");
[INFO] [stdout]     |                             ----^^^^^
[INFO] [stdout]     |                             |
[INFO] [stdout]     |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:792:6
[INFO] [stdout]     |
[INFO] [stdout] 792 |     let mut sequence = 
[INFO] [stdout]     |         ----^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:796:9
[INFO] [stdout]     |
[INFO] [stdout] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stdout]     |                     ----^^^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:800:9
[INFO] [stdout]     |
[INFO] [stdout] 800 |                 let mut split = sequence.split("\n");
[INFO] [stdout]     |                     ----^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `name` and `id` are never read
[INFO] [stdout]   --> src/main.rs:62:2
[INFO] [stdout]    |
[INFO] [stdout] 61 | struct GenRead{
[INFO] [stdout]    |        ------- fields in this struct
[INFO] [stdout] 62 |     name: String,
[INFO] [stdout]    |     ^^^^
[INFO] [stdout] 63 |     id : u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `print_2d_vec` is never used
[INFO] [stdout]    --> src/main.rs:193:4
[INFO] [stdout]     |
[INFO] [stdout] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stdout]     |    ^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `fitting_alignment` is never used
[INFO] [stdout]    --> src/main.rs:203:4
[INFO] [stdout]     |
[INFO] [stdout] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/main.rs:50:10
[INFO] [stdout]    |
[INFO] [stdout] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stdout]    |          ^--------
[INFO] [stdout]    |          |
[INFO] [stdout]    |          `Serialize` is not local
[INFO] [stdout]    |          move the `impl` block outside of this constant `_IMPL_SERIALIZE_FOR_FmIndex`
[INFO] [stdout] 51 | struct FmIndex {
[INFO] [stdout]    |        ------- `FmIndex` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Serialize` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stdout]    = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/main.rs:50:21
[INFO] [stdout]    |
[INFO] [stdout] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stdout]    |                     ^----------
[INFO] [stdout]    |                     |
[INFO] [stdout]    |                     `Deserialize` is not local
[INFO] [stdout]    |                     move the `impl` block outside of this constant `_IMPL_DESERIALIZE_FOR_FmIndex`
[INFO] [stdout] 51 | struct FmIndex {
[INFO] [stdout]    |        ------- `FmIndex` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Deserialize` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `CIGAR` should have a snake case name
[INFO] [stdout]   --> src/main.rs:70:2
[INFO] [stdout]    |
[INFO] [stdout] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stdout]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused `Result` that must be used
[INFO] [stdout]    --> src/main.rs:368:2
[INFO] [stdout]     |
[INFO] [stdout] 368 |     file.read_to_end(&mut data);
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stdout]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stdout] help: use `let _ = ...` to ignore the resulting value
[INFO] [stdout]     |
[INFO] [stdout] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stdout]     |     +++++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: constant `gap` should have an upper case name
[INFO] [stdout]    --> src/main.rs:384:8
[INFO] [stdout]     |
[INFO] [stdout] 384 |     const gap : usize = 5;
[INFO] [stdout]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `L_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:711:10
[INFO] [stdout]     |
[INFO] [stdout] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col` should have a snake case name
[INFO] [stdout]    --> src/main.rs:712:10
[INFO] [stdout]     |
[INFO] [stdout] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stdout]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stdout]    --> src/main.rs:752:10
[INFO] [stdout]     |
[INFO] [stdout] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.40s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] running `Command { std: "docker" "inspect" "2b3f56856241d9416a22c39c089ce26b5dd7844f737b433c8f06fb4e4511d9ae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2b3f56856241d9416a22c39c089ce26b5dd7844f737b433c8f06fb4e4511d9ae", kill_on_drop: false }`
[INFO] [stdout] 2b3f56856241d9416a22c39c089ce26b5dd7844f737b433c8f06fb4e4511d9ae
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Zrandomize-layout" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 1beb874dd3fed21a801d4e01686e19adcaa87e09b5705f39fe647715294bbd82
[INFO] running `Command { std: "docker" "start" "-a" "1beb874dd3fed21a801d4e01686e19adcaa87e09b5705f39fe647715294bbd82", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `std::str::Chars`
[INFO] [stderr]  --> src/main.rs:8:5
[INFO] [stderr]   |
[INFO] [stderr] 8 | use std::str::Chars;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::iter::Rev`
[INFO] [stderr]  --> src/main.rs:9:5
[INFO] [stderr]   |
[INFO] [stderr] 9 | use std::iter::Rev;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Aux`
[INFO] [stderr]   --> src/main.rs:12:45
[INFO] [stderr]    |
[INFO] [stderr] 12 | use rust_htslib::bam::record::{CigarString, Aux, Cigar};
[INFO] [stderr]    |                                             ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::convert::TryFrom`
[INFO] [stderr]   --> src/main.rs:14:5
[INFO] [stderr]    |
[INFO] [stderr] 14 | use std::convert::TryFrom;
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `thread` and `time`
[INFO] [stderr]   --> src/main.rs:15:11
[INFO] [stderr]    |
[INFO] [stderr] 15 | use std::{thread, time};
[INFO] [stderr]    |           ^^^^^^  ^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary trailing semicolon
[INFO] [stderr]    --> src/main.rs:356:3
[INFO] [stderr]     |
[INFO] [stderr] 356 |     };
[INFO] [stderr]     |      ^ help: remove this semicolon
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(redundant_semicolons)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:110:7
[INFO] [stderr]     |
[INFO] [stderr] 110 |         let mut c1 = remaining_query.next().unwrap();
[INFO] [stderr]     |             ----^^
[INFO] [stderr]     |             |
[INFO] [stderr]     |             help: remove this `mut`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seed_pos`
[INFO] [stderr]    --> src/main.rs:392:7
[INFO] [stderr]     |
[INFO] [stderr] 392 |         let seed_pos = 0;
[INFO] [stderr]     |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seed_pos`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `seqs`
[INFO] [stderr]    --> src/main.rs:516:16
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                ^^^^ help: if this is intentional, prefix it with an underscore: `_seqs`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `quals`
[INFO] [stderr]    --> src/main.rs:516:22
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                      ^^^^^ help: if this is intentional, prefix it with an underscore: `_quals`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `cigars`
[INFO] [stderr]    --> src/main.rs:516:29
[INFO] [stderr]     |
[INFO] [stderr] 516 | let (names, _, seqs, quals, cigars) = gold();
[INFO] [stderr]     |                             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_cigars`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `name`
[INFO] [stderr]    --> src/main.rs:532:17
[INFO] [stderr]     |
[INFO] [stderr] 532 |             for name in names.iter() {
[INFO] [stderr]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_name`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `sam`
[INFO] [stderr]    --> src/main.rs:548:13
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_sam`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:548:9
[INFO] [stderr]     |
[INFO] [stderr] 548 |     let mut sam = Writer::from_path("test123.sam", &header, Format::SAM);
[INFO] [stderr]     |         ----^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:659:6
[INFO] [stderr]     |
[INFO] [stderr] 659 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:665:11
[INFO] [stderr]     |
[INFO] [stderr] 665 |                         let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                             ----^^^^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:669:11
[INFO] [stderr]     |
[INFO] [stderr] 669 |                         let mut split = sequence.split("\n");
[INFO] [stderr]     |                             ----^^^^^
[INFO] [stderr]     |                             |
[INFO] [stderr]     |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:792:6
[INFO] [stderr]     |
[INFO] [stderr] 792 |     let mut sequence = 
[INFO] [stderr]     |         ----^^^^^^^^
[INFO] [stderr]     |         |
[INFO] [stderr]     |         help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:796:9
[INFO] [stderr]     |
[INFO] [stderr] 796 |                 let mut sequence = fs::read_to_string(input_file)
[INFO] [stderr]     |                     ----^^^^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:800:9
[INFO] [stderr]     |
[INFO] [stderr] 800 |                 let mut split = sequence.split("\n");
[INFO] [stderr]     |                     ----^^^^^
[INFO] [stderr]     |                     |
[INFO] [stderr]     |                     help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: fields `name` and `id` are never read
[INFO] [stderr]   --> src/main.rs:62:2
[INFO] [stderr]    |
[INFO] [stderr] 61 | struct GenRead{
[INFO] [stderr]    |        ------- fields in this struct
[INFO] [stderr] 62 |     name: String,
[INFO] [stderr]    |     ^^^^
[INFO] [stderr] 63 |     id : u32,
[INFO] [stderr]    |     ^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `print_2d_vec` is never used
[INFO] [stderr]    --> src/main.rs:193:4
[INFO] [stderr]     |
[INFO] [stderr] 193 | fn print_2d_vec<T : Debug>(matrix : &Vec<Vec<T>>){
[INFO] [stderr]     |    ^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `fitting_alignment` is never used
[INFO] [stderr]    --> src/main.rs:203:4
[INFO] [stderr]     |
[INFO] [stderr] 203 | fn fitting_alignment(x : &str, y : &str) -> Vec<Alignment> {
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stderr]   --> src/main.rs:50:10
[INFO] [stderr]    |
[INFO] [stderr] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stderr]    |          ^--------
[INFO] [stderr]    |          |
[INFO] [stderr]    |          `Serialize` is not local
[INFO] [stderr]    |          move the `impl` block outside of this constant `_IMPL_SERIALIZE_FOR_FmIndex`
[INFO] [stderr] 51 | struct FmIndex {
[INFO] [stderr]    |        ------- `FmIndex` is not local
[INFO] [stderr]    |
[INFO] [stderr]    = note: the derive macro `Serialize` defines the non-local `impl`, and may need to be changed
[INFO] [stderr]    = note: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stderr]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stderr]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stderr]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stderr]    = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stderr] 
[INFO] [stderr] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stderr]   --> src/main.rs:50:21
[INFO] [stderr]    |
[INFO] [stderr] 50 | #[derive(Serialize, Deserialize, Debug)]
[INFO] [stderr]    |                     ^----------
[INFO] [stderr]    |                     |
[INFO] [stderr]    |                     `Deserialize` is not local
[INFO] [stderr]    |                     move the `impl` block outside of this constant `_IMPL_DESERIALIZE_FOR_FmIndex`
[INFO] [stderr] 51 | struct FmIndex {
[INFO] [stderr]    |        ------- `FmIndex` is not local
[INFO] [stderr]    |
[INFO] [stderr]    = note: the derive macro `Deserialize` defines the non-local `impl`, and may need to be changed
[INFO] [stderr]    = note: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive`
[INFO] [stderr]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stderr]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stderr]    = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stderr] 
[INFO] [stderr] warning: structure field `CIGAR` should have a snake case name
[INFO] [stderr]   --> src/main.rs:70:2
[INFO] [stderr]    |
[INFO] [stderr] 70 |     CIGAR : Vec<Cigar>,
[INFO] [stderr]    |     ^^^^^ help: convert the identifier to snake case: `cigar`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(non_snake_case)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused `Result` that must be used
[INFO] [stderr]    --> src/main.rs:368:2
[INFO] [stderr]     |
[INFO] [stderr] 368 |     file.read_to_end(&mut data);
[INFO] [stderr]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stderr]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stderr] help: use `let _ = ...` to ignore the resulting value
[INFO] [stderr]     |
[INFO] [stderr] 368 |     let _ = file.read_to_end(&mut data);
[INFO] [stderr]     |     +++++++
[INFO] [stderr] 
[INFO] [stderr] warning: constant `gap` should have an upper case name
[INFO] [stderr]    --> src/main.rs:384:8
[INFO] [stderr]     |
[INFO] [stderr] 384 |     const gap : usize = 5;
[INFO] [stderr]     |           ^^^ help: convert the identifier to upper case: `GAP`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(non_upper_case_globals)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable `L_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:711:10
[INFO] [stderr]     |
[INFO] [stderr] 711 |     let mut L_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case: `l_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col` should have a snake case name
[INFO] [stderr]    --> src/main.rs:712:10
[INFO] [stderr]     |
[INFO] [stderr] 712 |     let mut F_col = Vec::<char>::new();
[INFO] [stderr]     |             ^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `F_col_compressed` should have a snake case name
[INFO] [stderr]    --> src/main.rs:752:10
[INFO] [stderr]     |
[INFO] [stderr] 752 |     let mut F_col_compressed = HashMap::<char, usize>::new();
[INFO] [stderr]     |             ^^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `f_col_compressed`
[INFO] [stderr] 
[INFO] [stderr] warning: `fmmap` (bin "fmmap" test) generated 31 warnings (run `cargo fix --bin "fmmap" --tests` to apply 13 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bindgen v0.53.2, nom v5.1.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/fmmap-2d0b6a462ada21e7)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test test_borrow ... ok
[INFO] [stdout] test test_fitting_alignment2 ... ok
[INFO] [stderr] [E::hts_open_format] Failed to open file "yeet.sam" : Read-only file system
[INFO] [stderr] [E::hts_open_format] Failed to open file "test123.sam" : Read-only file system
[INFO] [stdout] test test_write_sam2 ... ok
[INFO] [stdout] test test_write_sam ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- test_write_sam stdout ----
[INFO] [stdout] thread 'test_write_sam' panicked at src/main.rs:530:14:
[INFO] [stdout] Error opening file.
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5bb384a6c15a - std::backtrace_rs::backtrace::libunwind::trace::h207520d6e9873551
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/../../backtrace/src/backtrace/libunwind.rs:116:5
[INFO] [stdout]    1:     0x5bb384a6c15a - std::backtrace_rs::backtrace::trace_unsynchronized::h2ed7433f370e3eca
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5
[INFO] [stdout]    2:     0x5bb384a6c15a - std::sys::backtrace::_print_fmt::h916fac51166b18d7
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x5bb384a6c15a - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::ha0a4c9b8ce3802e6
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x5bb384a92793 - core::fmt::rt::Argument::fmt::h4cfc8587d52b3eb5
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/fmt/rt.rs:177:76
[INFO] [stdout]    5:     0x5bb384a92793 - core::fmt::write::h522cc39e5b36ae9f
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/fmt/mod.rs:1190:21
[INFO] [stdout]    6:     0x5bb384a68dc3 - std::io::Write::write_fmt::h7d3c26752da97734
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/io/mod.rs:1839:15
[INFO] [stdout]    7:     0x5bb384a6bfa2 - std::sys::backtrace::BacktraceLock::print::h4b9e00b29e9c0942
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    8:     0x5bb384a6d5ea - std::panicking::default_hook::{{closure}}::hb59b88280d0324d9
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:268:22
[INFO] [stdout]    9:     0x5bb384a6d3f4 - std::panicking::default_hook::he1dd496665be4a29
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:292:9
[INFO] [stdout]   10:     0x5bb3849d55d9 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h4ff71de18744e1dc
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/alloc/src/boxed.rs:2468:9
[INFO] [stdout]   11:     0x5bb3849d55d9 - test::test_main::{{closure}}::hcf7c055ce117aa81
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:133:21
[INFO] [stdout]   12:     0x5bb384a6dce8 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h1d66c6bbd60c9692
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/alloc/src/boxed.rs:2468:9
[INFO] [stdout]   13:     0x5bb384a6dce8 - std::panicking::rust_panic_with_hook::h2ff17fe8f26dfcf8
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:809:13
[INFO] [stdout]   14:     0x5bb384a6daaa - std::panicking::begin_panic_handler::{{closure}}::h4fad77951c07e101
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:674:13
[INFO] [stdout]   15:     0x5bb384a6c639 - std::sys::backtrace::__rust_end_short_backtrace::hb1a25b3da5d0ea08
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/backtrace.rs:170:18
[INFO] [stdout]   16:     0x5bb384a6d73c - rust_begin_unwind
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:665:5
[INFO] [stdout]   17:     0x5bb384a91190 - core::panicking::panic_fmt::ha9db07b529f9b256
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/panicking.rs:75:14
[INFO] [stdout]   18:     0x5bb384a9116b - core::panicking::panic_display::h974ff3dec7c08c85
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/panicking.rs:273:5
[INFO] [stdout]   19:     0x5bb384a9116b - core::option::expect_failed::h08d05c9ecb334afa
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/option.rs:2017:5
[INFO] [stdout]   20:     0x5bb3849964f9 - core::option::Option<T>::expect::h76ed1234912c2393
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/option.rs:932:21
[INFO] [stdout]   21:     0x5bb38499a4aa - fmmap::test_write_sam::hb2a08df2e81f4550
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:519:27
[INFO] [stdout]   22:     0x5bb38499a187 - fmmap::test_write_sam::{{closure}}::h4c519e0f3da9b912
[INFO] [stdout]                                at /opt/rustwide/workdir/src/main.rs:514:20
[INFO] [stdout]   23:     0x5bb384991726 - core::ops::function::FnOnce::call_once::hdb13ab0f78b28fef
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x5bb3849d9eab - core::ops::function::FnOnce::call_once::h22c3ba5715e93f05
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x5bb3849d9eab - test::__rust_begin_short_backtrace::h8e82d8113d0da17f
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:621:18
[INFO] [stdout]   26:     0x5bb3849d9827 - test::run_test_in_process::{{closure}}::h33235f4f20b7b7c7
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:644:60
[INFO] [stdout]   27:     0x5bb3849d9827 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::hb5043206310c586f
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   28:     0x5bb3849d9827 - std::panicking::try::do_call::h9ad4731a60ab23e2
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:557:40
[INFO] [stdout]   29:     0x5bb3849d9827 - std::panicking::try::h3824d23db772a716
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:520:19
[INFO] [stdout]   30:     0x5bb3849d9827 - std::panic::catch_unwind::h5afd514605fde46b
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panic.rs:358:14
[INFO] [stdout]   31:     0x5bb3849d9827 - test::run_test_in_process::h0d5cbfa7067d1720
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:644:27
[INFO] [stdout]   32:     0x5bb3849d9827 - test::run_test::{{closure}}::h708eb8872708115d
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:565:43
[INFO] [stdout]   33:     0x5bb38499cf44 - test::run_test::{{closure}}::h392c51cee94713ab
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/test/src/lib.rs:595:41
[INFO] [stdout]   34:     0x5bb38499cf44 - std::sys::backtrace::__rust_begin_short_backtrace::h2f40290710935a8b
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/backtrace.rs:154:18
[INFO] [stdout]   35:     0x5bb3849a06ee - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h3fd968d89053a903
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/thread/mod.rs:541:17
[INFO] [stdout]   36:     0x5bb3849a06ee - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h743f637ba4229880
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   37:     0x5bb3849a06ee - std::panicking::try::do_call::h07440897322525a6
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:557:40
[INFO] [stdout]   38:     0x5bb3849a06ee - std::panicking::try::he5a2e00188156637
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panicking.rs:520:19
[INFO] [stdout]   39:     0x5bb3849a06ee - std::panic::catch_unwind::hbaf3cae49b3c6433
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/panic.rs:358:14
[INFO] [stdout]   40:     0x5bb3849a06ee - std::thread::Builder::spawn_unchecked_::{{closure}}::h8e141ea224820bce
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/thread/mod.rs:540:30
[INFO] [stdout]   41:     0x5bb3849a06ee - core::ops::function::FnOnce::call_once{{vtable.shim}}::h90d312fedd7b8ea8
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x5bb384a71b6b - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h69aa08ddb6adb8b6
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/alloc/src/boxed.rs:2454:9
[INFO] [stdout]   43:     0x5bb384a71b6b - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h5aa36efdb79c806f
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/alloc/src/boxed.rs:2454:9
[INFO] [stdout]   44:     0x5bb384a71b6b - std::sys::pal::unix::thread::Thread::new::thread_start::h6cd80a1b4be5158d
[INFO] [stdout]                                at /rustc/df4ca44d3fbc9301ee17f30f4d474e6ae4b05252/library/std/src/sys/pal/unix/thread.rs:105:17
[INFO] [stdout]   45:     0x761aec832ac3 - <unknown>
[INFO] [stdout]   46:     0x761aec8c3a04 - clone
[INFO] [stdout]   47:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     test_write_sam
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 3 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--bin fmmap`
[INFO] running `Command { std: "docker" "inspect" "1beb874dd3fed21a801d4e01686e19adcaa87e09b5705f39fe647715294bbd82", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1beb874dd3fed21a801d4e01686e19adcaa87e09b5705f39fe647715294bbd82", kill_on_drop: false }`
[INFO] [stdout] 1beb874dd3fed21a801d4e01686e19adcaa87e09b5705f39fe647715294bbd82
