[INFO] fetching crate deepbiop-cli 0.1.11...
[INFO] testing deepbiop-cli-0.1.11 against nightly-2024-10-28 for randomize-layout
[INFO] extracting crate deepbiop-cli 0.1.11 into /workspace/builds/worker-7-tc1/source
[INFO] validating manifest of crates.io crate deepbiop-cli 0.1.11 on toolchain nightly-2024-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate deepbiop-cli 0.1.11
[INFO] finished tweaking crates.io crate deepbiop-cli 0.1.11
[INFO] tweaked toml for crates.io crate deepbiop-cli 0.1.11 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] crate crates.io crate deepbiop-cli 0.1.11 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2024-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-csi v0.37.0
[INFO] [stderr]   Downloaded noodles-fasta v0.42.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.32.0
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded derive_builder_macro v0.20.0
[INFO] [stderr]   Downloaded pyo3-stub-gen-derive v0.6.0
[INFO] [stderr]   Downloaded noodles-fastq v0.14.0
[INFO] [stderr]   Downloaded clap-verbosity-flag v2.2.1
[INFO] [stderr]   Downloaded arrow-arith v52.2.0
[INFO] [stderr]   Downloaded clap_complete v4.5.23
[INFO] [stderr]   Downloaded arrow-data v52.2.0
[INFO] [stderr]   Downloaded arrow v52.2.0
[INFO] [stderr]   Downloaded arrow-cast v52.2.0
[INFO] [stderr]   Downloaded numpy v0.21.0
[INFO] [stderr]   Downloaded arrow-ipc v52.2.0
[INFO] [stderr]   Downloaded arrow-buffer v52.2.0
[INFO] [stderr]   Downloaded noodles-bam v0.66.0
[INFO] [stderr]   Downloaded arrow-array v52.2.0
[INFO] [stderr]   Downloaded candle-core v0.6.0
[INFO] [stderr]   Downloaded noodles-sam v0.63.0
[INFO] [stderr]   Downloaded arrow-select v52.2.0
[INFO] [stderr]   Downloaded needletail v0.5.1
[INFO] [stderr]   Downloaded arrow-json v52.2.0
[INFO] [stderr]   Downloaded arrow-ord v52.2.0
[INFO] [stderr]   Downloaded arrow-row v52.2.0
[INFO] [stderr]   Downloaded derive_builder v0.20.0
[INFO] [stderr]   Downloaded deepbiop-fq v0.1.11
[INFO] [stderr]   Downloaded arrow-csv v52.2.0
[INFO] [stderr]   Downloaded arrow-schema v52.2.0
[INFO] [stderr]   Downloaded derive_builder_core v0.20.0
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded pyo3-stub-gen v0.6.0
[INFO] [stderr]   Downloaded deepbiop-utils v0.1.11
[INFO] [stderr]   Downloaded parquet v52.2.0
[INFO] [stderr]   Downloaded libz-ng-sys v1.1.16
[INFO] [stderr]   Downloaded deepbiop-bam v0.1.11
[INFO] [stderr]   Downloaded arrow-string v52.2.0
[INFO] [stderr]   Downloaded safetensors v0.4.4
[INFO] [stderr]   Downloaded xz2 v0.1.7
[INFO] [stderr]   Downloaded human-panic v2.0.1
[INFO] [stderr]   Downloaded noodles v0.79.0
[INFO] [stderr]   Downloaded zstd-sys v2.0.12+zstd.1.5.6
[INFO] [stderr]   Downloaded lzma-sys v0.1.20
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 0e98f20e6acec7855b99ff95dcd70e9d3a4e8adc306b75023f537aa978b0f98d
[INFO] running `Command { std: "docker" "start" "-a" "0e98f20e6acec7855b99ff95dcd70e9d3a4e8adc306b75023f537aa978b0f98d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0e98f20e6acec7855b99ff95dcd70e9d3a4e8adc306b75023f537aa978b0f98d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0e98f20e6acec7855b99ff95dcd70e9d3a4e8adc306b75023f537aa978b0f98d", kill_on_drop: false }`
[INFO] [stdout] 0e98f20e6acec7855b99ff95dcd70e9d3a4e8adc306b75023f537aa978b0f98d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2024-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e315d1295e3af693c3c6a2d2e51cddb118928ad95fd3a62a73854fab2baa0ebe
[INFO] running `Command { std: "docker" "start" "-a" "e315d1295e3af693c3c6a2d2e51cddb118928ad95fd3a62a73854fab2baa0ebe", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.86
[INFO] [stderr]    Compiling libc v0.2.158
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[INFO] [stderr]    Compiling lexical-util v0.8.5
[INFO] [stderr]    Compiling quote v1.0.37
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[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]    Compiling indexmap v2.4.0
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling regex-syntax v0.8.4
[INFO] [stderr]    Compiling target-lexicon v0.12.16
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[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling synstructure v0.13.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
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[INFO] [stderr]    Compiling pyo3-macros v0.21.2
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[INFO] [stderr]    Compiling gemm-f32 v0.17.1
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[INFO] [stderr]    Compiling flate2 v1.0.33
[INFO] [stderr]    Compiling thiserror-impl v1.0.63
[INFO] [stderr]    Compiling noodles-bgzf v0.32.0
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[INFO] [stderr]    Compiling noodles-csi v0.37.0
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[INFO] [stderr]    Compiling linux-raw-sys v0.4.14
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling numpy v0.21.0
[INFO] [stderr]    Compiling noodles-sam v0.63.0
[INFO] [stderr]    Compiling zerofrom v0.1.4
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[INFO] [stderr]    Compiling arrow-ipc v52.2.0
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[INFO] [stderr]    Compiling unicode-width v0.1.13
[INFO] [stderr]    Compiling unicode-linebreak v0.1.5
[INFO] [stderr]    Compiling maplit v1.0.2
[INFO] [stderr]    Compiling integer-encoding v3.0.4
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling clap_lex v0.7.2
[INFO] [stderr]    Compiling smawk v0.3.2
[INFO] [stderr]    Compiling fastrand v2.1.1
[INFO] [stderr]    Compiling cfg_aliases v0.2.1
[INFO] [stderr]    Compiling nix v0.29.0
[INFO] [stderr]    Compiling needletail v0.5.1
[INFO] [stderr]    Compiling textwrap v0.16.1
[INFO] [stderr]    Compiling tempfile v3.12.0
[INFO] [stderr]    Compiling clap_builder v4.5.15
[INFO] [stderr]    Compiling pyo3-stub-gen v0.6.0
[INFO] [stderr]    Compiling thrift v0.17.0
[INFO] [stderr]    Compiling clap_derive v4.5.13
[INFO] [stderr]    Compiling lz4_flex v0.11.3
[INFO] [stderr]    Compiling gemm v0.17.1
[INFO] [stderr]    Compiling yoke v0.7.4
[INFO] [stderr]    Compiling brotli v6.0.0
[INFO] [stderr]    Compiling noodles-bam v0.66.0
[INFO] [stderr]    Compiling derive_builder v0.20.0
[INFO] [stderr]    Compiling arrow-csv v52.2.0
[INFO] [stderr]    Compiling zstd v0.13.2
[INFO] [stderr]    Compiling memmap2 v0.9.4
[INFO] [stderr]    Compiling noodles-fasta v0.42.0
[INFO] [stderr]    Compiling arrow-json v52.2.0
[INFO] [stderr]    Compiling arrow-ord v52.2.0
[INFO] [stderr]    Compiling arrow-string v52.2.0
[INFO] [stderr]    Compiling arrow-row v52.2.0
[INFO] [stderr]    Compiling arrow-arith v52.2.0
[INFO] [stderr]    Compiling safetensors v0.4.4
[INFO] [stderr]    Compiling colored v2.1.0
[INFO] [stderr]    Compiling noodles-fastq v0.14.0
[INFO] [stderr]    Compiling lexical v6.1.1
[INFO] [stderr]    Compiling backtrace v0.3.73
[INFO] [stderr]    Compiling num_cpus v1.16.0
[INFO] [stderr]    Compiling gimli v0.29.0
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling same-file v1.0.6
[INFO] [stderr]    Compiling miniz_oxide v0.7.4
[INFO] [stderr]    Compiling candle-core v0.6.0
[INFO] [stderr]    Compiling deepbiop-utils v0.1.11
[INFO] [stderr]    Compiling walkdir v2.5.0
[INFO] [stderr]    Compiling noodles v0.79.0
[INFO] [stderr]    Compiling parquet v52.2.0
[INFO] [stderr]    Compiling arrow v52.2.0
[INFO] [stderr]    Compiling clap v4.5.16
[INFO] [stderr]    Compiling object v0.36.3
[INFO] [stderr]    Compiling rustc-demangle v0.1.24
[INFO] [stderr]    Compiling os_info v3.8.2
[INFO] [stderr]    Compiling addr2line v0.22.0
[INFO] [stderr]    Compiling env_filter v0.1.2
[INFO] [stderr]    Compiling uuid v1.10.0
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling ctrlc v3.4.5
[INFO] [stderr]    Compiling clap-verbosity-flag v2.2.1
[INFO] [stderr]    Compiling env_logger v0.11.5
[INFO] [stderr]    Compiling clap_complete v4.5.23
[INFO] [stderr]    Compiling human-panic v2.0.1
[INFO] [stderr]    Compiling deepbiop-fq v0.1.11
[INFO] [stderr]    Compiling deepbiop-bam v0.1.11
[INFO] [stderr] error: could not compile `parquet` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/nightly-2024-10-28-x86_64-unknown-linux-gnu/bin/rustc --crate-name parquet --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/parquet-52.2.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="arrow"' --cfg 'feature="arrow-array"' --cfg 'feature="arrow-buffer"' --cfg 'feature="arrow-cast"' --cfg 'feature="arrow-data"' --cfg 'feature="arrow-ipc"' --cfg 'feature="arrow-schema"' --cfg 'feature="arrow-select"' --cfg 'feature="base64"' --cfg 'feature="brotli"' --cfg 'feature="default"' --cfg 'feature="flate2"' --cfg 'feature="lz4"' --cfg 'feature="lz4_flex"' --cfg 'feature="snap"' --cfg 'feature="zstd"' --cfg 'feature="zstd-sys"' --check-cfg 'cfg(docsrs)' --check-cfg 'cfg(feature, values("arrow", "arrow-array", "arrow-buffer", "arrow-cast", "arrow-csv", "arrow-data", "arrow-ipc", "arrow-schema", "arrow-select", "async", "base64", "brotli", "clap", "cli", "default", "experimental", "flate2", "futures", "json", "lz4", "lz4_flex", "object_store", "serde", "serde_json", "snap", "test_common", "tokio", "zstd", "zstd-sys"))' -C metadata=0a8b995e36c0934e -C extra-filename=-0a8b995e36c0934e --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern ahash=/opt/rustwide/target/debug/deps/libahash-2d0e039d57ea96a8.rmeta --extern arrow_array=/opt/rustwide/target/debug/deps/libarrow_array-b22ee46b58fd4a2d.rmeta --extern arrow_buffer=/opt/rustwide/target/debug/deps/libarrow_buffer-c0bfe6ffce29bc2d.rmeta --extern arrow_cast=/opt/rustwide/target/debug/deps/libarrow_cast-174265787866f18e.rmeta --extern arrow_data=/opt/rustwide/target/debug/deps/libarrow_data-ba4b6dc6c7f6d3b8.rmeta --extern arrow_ipc=/opt/rustwide/target/debug/deps/libarrow_ipc-1d47135bf9f5dcba.rmeta --extern arrow_schema=/opt/rustwide/target/debug/deps/libarrow_schema-63d4e8399c5858da.rmeta --extern arrow_select=/opt/rustwide/target/debug/deps/libarrow_select-b58fffbdd3a5bd67.rmeta --extern base64=/opt/rustwide/target/debug/deps/libbase64-c167c3eb3ecc322f.rmeta --extern brotli=/opt/rustwide/target/debug/deps/libbrotli-e1799bf1f55fdaab.rmeta --extern bytes=/opt/rustwide/target/debug/deps/libbytes-74d87212c8a9491f.rmeta --extern chrono=/opt/rustwide/target/debug/deps/libchrono-6eab50956f17a757.rmeta --extern flate2=/opt/rustwide/target/debug/deps/libflate2-4e1b5d4e1426a1e8.rmeta --extern half=/opt/rustwide/target/debug/deps/libhalf-41f91dabf3aafd51.rmeta --extern hashbrown=/opt/rustwide/target/debug/deps/libhashbrown-7d5e5d9d6d4f90ef.rmeta --extern lz4_flex=/opt/rustwide/target/debug/deps/liblz4_flex-b1444bed42273db7.rmeta --extern num=/opt/rustwide/target/debug/deps/libnum-af506dfc7a1b5799.rmeta --extern num_bigint=/opt/rustwide/target/debug/deps/libnum_bigint-b0da38a091a1622b.rmeta --extern paste=/opt/rustwide/target/debug/deps/libpaste-328a92098632ae7d.so --extern seq_macro=/opt/rustwide/target/debug/deps/libseq_macro-c0fbde8077860243.so --extern snap=/opt/rustwide/target/debug/deps/libsnap-b40843aab59487f6.rmeta --extern thrift=/opt/rustwide/target/debug/deps/libthrift-130b56555a07ba1c.rmeta --extern twox_hash=/opt/rustwide/target/debug/deps/libtwox_hash-cd85363c17c1e382.rmeta --extern zstd=/opt/rustwide/target/debug/deps/libzstd-1e8ed502ba94ca08.rmeta --cap-lints allow --cap-lints=forbid -L native=/opt/rustwide/target/debug/build/libz-ng-sys-bef4fffa64235005/out/lib -L native=/opt/rustwide/target/debug/build/libz-ng-sys-bef4fffa64235005/out/lib64 -L native=/opt/rustwide/target/debug/build/zstd-sys-70abce0679bfa53f/out` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "e315d1295e3af693c3c6a2d2e51cddb118928ad95fd3a62a73854fab2baa0ebe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e315d1295e3af693c3c6a2d2e51cddb118928ad95fd3a62a73854fab2baa0ebe", kill_on_drop: false }`
[INFO] [stdout] e315d1295e3af693c3c6a2d2e51cddb118928ad95fd3a62a73854fab2baa0ebe
