[INFO] fetching crate mzdeisotope 0.2.5...
[INFO] testing mzdeisotope-0.2.5 against nightly-2025-01-18 for randomize-layout-2
[INFO] extracting crate mzdeisotope 0.2.5 into /workspace/builds/worker-3-tc1/source
[INFO] validating manifest of crates.io crate mzdeisotope 0.2.5 on toolchain nightly-2025-01-18
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2025-01-18" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate mzdeisotope 0.2.5
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate mzdeisotope 0.2.5
[INFO] tweaked toml for crates.io crate mzdeisotope 0.2.5 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate crates.io crate mzdeisotope 0.2.5 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+nightly-2025-01-18" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded env_logger v0.11.6
[INFO] [stderr]   Downloaded outref v0.5.1
[INFO] [stderr]   Downloaded nalgebra-macros v0.2.2
[INFO] [stderr]   Downloaded test-log-macros v0.2.16
[INFO] [stderr]   Downloaded thiserror-impl v2.0.9
[INFO] [stderr]   Downloaded test-log v0.2.16
[INFO] [stderr]   Downloaded env_filter v0.1.3
[INFO] [stderr]   Downloaded identity-hash v0.1.0
[INFO] [stderr]   Downloaded thiserror v2.0.9
[INFO] [stderr]   Downloaded mzpeaks v1.0.1
[INFO] [stderr]   Downloaded simba v0.9.0
[INFO] [stderr]   Downloaded wide v0.7.30
[INFO] [stderr]   Downloaded serde_json v1.0.134
[INFO] [stderr]   Downloaded chemical_elements v0.5.0
[INFO] [stderr]   Downloaded mzsignal v1.0.7
[INFO] [stderr]   Downloaded quick-xml v0.30.0
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] [stderr]   Downloaded mzdata v0.41.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:819108c5571ea2e421544af4d832f968d213c87fbe3707a016657f43d2f853bc" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2025-01-18" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d261d9b914f259dbd68b8ee417bb15bf7ceab6a6933a73dd138d4681eb3d203c
[INFO] running `Command { std: "docker" "start" "-a" "d261d9b914f259dbd68b8ee417bb15bf7ceab6a6933a73dd138d4681eb3d203c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d261d9b914f259dbd68b8ee417bb15bf7ceab6a6933a73dd138d4681eb3d203c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d261d9b914f259dbd68b8ee417bb15bf7ceab6a6933a73dd138d4681eb3d203c", kill_on_drop: false }`
[INFO] [stdout] d261d9b914f259dbd68b8ee417bb15bf7ceab6a6933a73dd138d4681eb3d203c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:819108c5571ea2e421544af4d832f968d213c87fbe3707a016657f43d2f853bc" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2025-01-18" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e5e327763cf62094babb5ee076fbbde8b1fc9df0e02ca09966c179eae1eff058
[INFO] running `Command { std: "docker" "start" "-a" "e5e327763cf62094babb5ee076fbbde8b1fc9df0e02ca09966c179eae1eff058", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.92
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[INFO] [stderr]    Compiling pin-project-lite v0.2.15
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling darling_core v0.20.10
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[INFO] [stderr]    Compiling thiserror-impl v2.0.9
[INFO] [stderr]    Compiling tracing-attributes v0.1.28
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[INFO] [stderr]    Compiling darling_macro v0.20.10
[INFO] [stderr]    Compiling darling v0.20.10
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[INFO] [stderr]    Compiling quick-xml v0.30.0
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[INFO] [stderr]    Compiling mzsignal v1.0.7
[INFO] [stderr]    Compiling mzdata v0.41.0
[INFO] [stderr]    Compiling mzdeisotope v0.2.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 27s
[INFO] running `Command { std: "docker" "inspect" "e5e327763cf62094babb5ee076fbbde8b1fc9df0e02ca09966c179eae1eff058", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e5e327763cf62094babb5ee076fbbde8b1fc9df0e02ca09966c179eae1eff058", kill_on_drop: false }`
[INFO] [stdout] e5e327763cf62094babb5ee076fbbde8b1fc9df0e02ca09966c179eae1eff058
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:819108c5571ea2e421544af4d832f968d213c87fbe3707a016657f43d2f853bc" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2025-01-18" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 7473ceec1209ceeb15ff7b5cdc9a3c483977125eed9427487a20563bab15c338
[INFO] running `Command { std: "docker" "start" "-a" "7473ceec1209ceeb15ff7b5cdc9a3c483977125eed9427487a20563bab15c338", kill_on_drop: false }`
[INFO] [stderr]    Compiling log v0.4.22
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling tracing-core v0.1.33
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling anstyle-query v1.1.2
[INFO] [stderr]    Compiling colorchoice v1.0.3
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.1
[INFO] [stderr]    Compiling anstyle-parse v0.2.6
[INFO] [stderr]    Compiling anstyle v1.0.10
[INFO] [stderr]    Compiling overload v0.1.1
[INFO] [stderr]    Compiling nu-ansi-term v0.46.0
[INFO] [stderr]    Compiling sharded-slab v0.1.7
[INFO] [stderr]    Compiling env_filter v0.1.3
[INFO] [stderr]    Compiling mzsignal v1.0.7
[INFO] [stderr]    Compiling anstream v0.6.18
[INFO] [stderr]    Compiling thread_local v1.1.8
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[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling test-log-macros v0.2.16
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling mzdata v0.41.0
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[INFO] [stderr]    Compiling matchers v0.1.0
[INFO] [stderr]    Compiling tracing-subscriber v0.3.19
[INFO] [stderr]    Compiling test-log v0.2.16
[INFO] [stderr]    Compiling mzdeisotope v0.2.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 48.95s
[INFO] running `Command { std: "docker" "inspect" "7473ceec1209ceeb15ff7b5cdc9a3c483977125eed9427487a20563bab15c338", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7473ceec1209ceeb15ff7b5cdc9a3c483977125eed9427487a20563bab15c338", kill_on_drop: false }`
[INFO] [stdout] 7473ceec1209ceeb15ff7b5cdc9a3c483977125eed9427487a20563bab15c338
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:819108c5571ea2e421544af4d832f968d213c87fbe3707a016657f43d2f853bc" "/opt/rustwide/cargo-home/bin/cargo" "+nightly-2025-01-18" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 8c08a79d5b175837988f76d72481e009f9d652f184292869ddbb4887524c8bbc
[INFO] running `Command { std: "docker" "start" "-a" "8c08a79d5b175837988f76d72481e009f9d652f184292869ddbb4887524c8bbc", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.39s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mzdeisotope-9cac7ceb7c9c5c54)
[INFO] [stdout] 
[INFO] [stdout] running 22 tests
[INFO] [stdout] test charge::test::test_quick_charge ... FAILED
[INFO] [stdout] test deconvoluter::test::test_builder ... ok
[INFO] [stdout] test deconvoluter::test::test_fit_all ... ok
[INFO] [stdout] test deconvoluter::test::test_file_graph_step ... FAILED
[INFO] [stdout] test deconvoluter::test::test_full_process ... FAILED
[INFO] [stdout] test deconvoluter::test::test_file_step ... FAILED
[INFO] [stdout] test deconvoluter::test::test_mut ... ok
[INFO] [stdout] test isotopic_model::test::test_cache_key ... ok
[INFO] [stdout] test isotopic_model::test::test_fc ... ok
[INFO] [stdout] test isotopic_model::test::test_conversion_for_frac_composition ... ok
[INFO] [stdout] test deconvoluter::test::test_full_process_quick_charge ... FAILED
[INFO] [stdout] test isotopic_model::test::test_tid ... ok
[INFO] [stdout] test isotopic_model::test::test_tid_cached ... ok
[INFO] [stdout] test scorer::test::test_gtest ... ok
[INFO] [stdout] test multi_model_deconvoluters::test::test_file_step ... FAILED
[INFO] [stdout] test isotopic_model::test::test_mz_truncation ... ok
[INFO] [stdout] test scorer::test::test_msdeconv ... ok
[INFO] [stdout] test scorer::test::test_scaled_gtest ... ok
[INFO] [stdout] test scorer::test::test_penalized_msdeconv ... ok
[INFO] [stdout] test isotopic_model::test::test_scale ... ok
[INFO] [stdout] test isotopic_model::test::test_cache ... ok
[INFO] [stdout] test isotopic_model::test::test_mono_to_base ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- charge::test::test_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_graph_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- multi_model_deconvoluters::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     charge::test::test_quick_charge
[INFO] [stdout]     deconvoluter::test::test_file_graph_step
[INFO] [stdout]     deconvoluter::test::test_file_step
[INFO] [stdout]     deconvoluter::test::test_full_process
[INFO] [stdout]     deconvoluter::test::test_full_process_quick_charge
[INFO] [stdout]     multi_model_deconvoluters::test::test_file_step
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 16 passed; 6 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.34s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "8c08a79d5b175837988f76d72481e009f9d652f184292869ddbb4887524c8bbc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8c08a79d5b175837988f76d72481e009f9d652f184292869ddbb4887524c8bbc", kill_on_drop: false }`
[INFO] [stdout] 8c08a79d5b175837988f76d72481e009f9d652f184292869ddbb4887524c8bbc
