[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against try#ba14a92a10441c4b839ce71e6ef5f7a48bbff18f for prs-64470-and-65389 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain ba14a92a10441c4b839ce71e6ef5f7a48bbff18f [INFO] running `"/workspace/cargo-home/bin/cargo" "+ba14a92a10441c4b839ce71e6ef5f7a48bbff18f" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `"/workspace/cargo-home/bin/cargo" "+ba14a92a10441c4b839ce71e6ef5f7a48bbff18f" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/workspace/cargo-home/bin/cargo" "+ba14a92a10441c4b839ce71e6ef5f7a48bbff18f" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+ba14a92a10441c4b839ce71e6ef5f7a48bbff18f" "check" "--frozen" "--all" "--all-targets"` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 9dece62d5f5270d63dd103a9f4bd248f7da62248976afc3e6af5996e4a75e0fb [INFO] running `"docker" "start" "-a" "9dece62d5f5270d63dd103a9f4bd248f7da62248976afc3e6af5996e4a75e0fb"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.build_script_build.9hgan7zc-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.build_script_build.9hgan7zc-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.build_script_build.9hgan7zc-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.build_script_build.9hgan7zc-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.build_script_build.9hgan7zc-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361" "/opt/rustwide/target/debug/build/hdf5-rs-d1aa3c22e432e361/build_script_build-d1aa3c22e432e361.1bnf41c1eulndxmi.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d639ee62b7565af3.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-2adedf72f6cad09b.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-62d75fa54003ac9d.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-b812effa64daadd3.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-d37fb0878affaf64.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-47fb0e67768d57fa.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-d3d888e1751f960c.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-ffa7be098b6e977d.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-6043ed09336d0b6f.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-a26b7468de7de9cf.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-74235b73122c21f4.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-85e68e585057a370.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-9fcfaa729fd13127.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-e4d1c52276390fc2.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-3417eb5c4b833eff.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `hdf5-rs`. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.build_script_build.dr887vqs-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.build_script_build.dr887vqs-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.build_script_build.dr887vqs-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.build_script_build.dr887vqs-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.build_script_build.dr887vqs-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3" "/opt/rustwide/target/debug/build/libhdf5-sys-b34781c64242f3a3/build_script_build-b34781c64242f3a3.1xwhq93kyto9vqw0.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d639ee62b7565af3.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-2adedf72f6cad09b.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-62d75fa54003ac9d.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-b812effa64daadd3.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-d37fb0878affaf64.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-47fb0e67768d57fa.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-d3d888e1751f960c.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-ffa7be098b6e977d.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-6043ed09336d0b6f.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-a26b7468de7de9cf.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-74235b73122c21f4.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-85e68e585057a370.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-9fcfaa729fd13127.rlib" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-e4d1c52276390fc2.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/ba14a92a10441c4b839ce71e6ef5f7a48bbff18f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-3417eb5c4b833eff.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "9dece62d5f5270d63dd103a9f4bd248f7da62248976afc3e6af5996e4a75e0fb"` [INFO] running `"docker" "rm" "-f" "9dece62d5f5270d63dd103a9f4bd248f7da62248976afc3e6af5996e4a75e0fb"` [INFO] [stdout] 9dece62d5f5270d63dd103a9f4bd248f7da62248976afc3e6af5996e4a75e0fb