[INFO] cloning repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/informationsea/sequencetoolkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit'... [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] updating cached repository https://github.com/informationsea/sequencetoolkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] dd0ea6f940b30b9aa1c7bddcbbf504770730a43e [INFO] checking informationsea/sequencetoolkit against try#ff47dd48ed0d02534055e0033cf766ce528f8ebc for pr-99447 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finformationsea%2Fsequencetoolkit" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/informationsea/sequencetoolkit on toolchain ff47dd48ed0d02534055e0033cf766ce528f8ebc [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ff47dd48ed0d02534055e0033cf766ce528f8ebc" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/informationsea/sequencetoolkit [INFO] finished tweaking git repo https://github.com/informationsea/sequencetoolkit [INFO] tweaked toml for git repo https://github.com/informationsea/sequencetoolkit written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/informationsea/sequencetoolkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ff47dd48ed0d02534055e0033cf766ce528f8ebc" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:824c28ce115f6b999260af6986f3384c158e782489540e41c0b698ca1d9fd927" "/opt/rustwide/cargo-home/bin/cargo" "+ff47dd48ed0d02534055e0033cf766ce528f8ebc" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1c04e47ea608957b5b5d949e63f937b5463f040e0ef6902a921988646dc5d41d [INFO] running `Command { std: "docker" "start" "-a" "1c04e47ea608957b5b5d949e63f937b5463f040e0ef6902a921988646dc5d41d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1c04e47ea608957b5b5d949e63f937b5463f040e0ef6902a921988646dc5d41d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1c04e47ea608957b5b5d949e63f937b5463f040e0ef6902a921988646dc5d41d", kill_on_drop: false }` [INFO] [stdout] 1c04e47ea608957b5b5d949e63f937b5463f040e0ef6902a921988646dc5d41d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:824c28ce115f6b999260af6986f3384c158e782489540e41c0b698ca1d9fd927" "/opt/rustwide/cargo-home/bin/cargo" "+ff47dd48ed0d02534055e0033cf766ce528f8ebc" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4b85210b0ce86c7a002fbf7c2e9e0ee18d925fb36be5d888b0fdfcfda5fb5684 [INFO] running `Command { std: "docker" "start" "-a" "4b85210b0ce86c7a002fbf7c2e9e0ee18d925fb36be5d888b0fdfcfda5fb5684", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.126 [INFO] [stderr] Compiling proc-macro2 v1.0.42 [INFO] [stderr] Compiling quote v1.0.20 [INFO] [stderr] Compiling unicode-ident v1.0.2 [INFO] [stderr] Compiling syn v1.0.98 [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling serde_derive v1.0.141 [INFO] [stderr] Compiling serde v1.0.141 [INFO] [stderr] Compiling pkg-config v0.3.25 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling libm v0.2.3 [INFO] [stderr] Compiling log v0.4.17 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Checking bitflags v1.3.2 [INFO] [stderr] Compiling lexical-core v0.7.6 [INFO] [stderr] Compiling rustversion v1.0.8 [INFO] [stderr] Compiling anyhow v1.0.59 [INFO] [stderr] Checking ryu v1.0.10 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking unicode-width v0.1.9 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking regex-syntax v0.6.27 [INFO] [stderr] Checking ansi_term v0.12.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling typenum v1.15.0 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking alloc-no-stdlib v2.0.3 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Checking once_cell v1.13.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.11 [INFO] [stderr] Compiling zstd-safe v4.1.3+zstd.1.5.1 [INFO] [stderr] Compiling paste v1.0.7 [INFO] [stderr] Compiling snap v1.0.5 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking hashbrown v0.12.3 [INFO] [stderr] Checking either v1.7.0 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Compiling unicode-segmentation v1.9.0 [INFO] [stderr] Compiling arrayvec v0.5.2 [INFO] [stderr] Compiling static_assertions v1.1.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking itoa v0.4.8 [INFO] [stderr] Checking strum v0.23.0 [INFO] [stderr] Checking bytecount v0.6.3 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Compiling bindgen v0.58.1 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling shlex v1.1.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Checking gimli v0.26.2 [INFO] [stderr] Compiling unicode-xid v0.2.3 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Checking matches v0.1.9 [INFO] [stderr] Checking rustc-demangle v0.1.21 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking unicode-bidi v0.3.8 [INFO] [stderr] Compiling serde_json v1.0.82 [INFO] [stderr] Checking itoa v1.0.2 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling indexmap v1.9.1 [INFO] [stderr] Compiling libloading v0.7.3 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking miniz_oxide v0.5.3 [INFO] [stderr] Compiling clang-sys v1.3.3 [INFO] [stderr] Checking alloc-stdlib v0.2.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking itertools v0.10.3 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking tinyvec v1.6.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Checking brotli-decompressor v2.3.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking addr2line v0.17.0 [INFO] [stderr] Checking aho-corasick v0.7.18 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking object v0.29.0 [INFO] [stderr] Checking unicode-normalization v0.1.21 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking getrandom v0.2.7 [INFO] [stderr] Checking flate2 v1.0.24 [INFO] [stderr] Checking crossbeam-channel v0.5.6 [INFO] [stderr] Checking regex v1.6.0 [INFO] [stderr] Checking brotli v3.3.4 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking petgraph v0.6.2 [INFO] [stderr] Checking num-complex v0.4.2 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v1.1.1 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Compiling cmake v0.1.48 [INFO] [stderr] Compiling openssl-src v111.22.0+1.1.1q [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.19 [INFO] [stderr] Compiling zstd-sys v1.6.2+zstd.1.5.1 [INFO] [stderr] Compiling lz4-sys v1.9.3 [INFO] [stderr] Compiling backtrace v0.3.66 [INFO] [stderr] Compiling curl-sys v0.4.56+curl-7.83.1 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stdout] error: unexpected token: crate [INFO] [stdout] --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/ndarray-0.15.6/src/slice.rs:845:44 [INFO] [stdout] | [INFO] [stdout] 845 | (@parse ::core::marker::PhantomData::<$crate::Ix0>, ::core::marker::PhantomData::<$crate::Ix0>, []) => { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] note: `$$`, `$crate`, and meta-variable expressions are not allowed inside macro parameter definitions [INFO] [stdout] --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/ndarray-0.15.6/src/slice.rs:845:44 [INFO] [stdout] | [INFO] [stdout] 845 | (@parse ::core::marker::PhantomData::<$crate::Ix0>, ::core::marker::PhantomData::<$crate::Ix0>, []) => { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: unexpected token: crate [INFO] [stdout] --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/ndarray-0.15.6/src/slice.rs:845:88 [INFO] [stdout] | [INFO] [stdout] 845 | (@parse ::core::marker::PhantomData::<$crate::Ix0>, ::core::marker::PhantomData::<$crate::Ix0>, []) => { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] note: `$$`, `$crate`, and meta-variable expressions are not allowed inside macro parameter definitions [INFO] [stdout] --> /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/ndarray-0.15.6/src/slice.rs:845:88 [INFO] [stdout] | [INFO] [stdout] 845 | (@parse ::core::marker::PhantomData::<$crate::Ix0>, ::core::marker::PhantomData::<$crate::Ix0>, []) => { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Checking simba v0.5.1 [INFO] [stderr] Compiling env_logger v0.8.4 [INFO] [stderr] Checking pretty_env_logger v0.4.0 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling openssl-sys v0.9.75 [INFO] [stderr] Compiling libz-sys v1.1.8 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling synstructure v0.12.6 [INFO] [stdout] error: aborting due to 2 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `ndarray` due to 3 previous errors [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "4b85210b0ce86c7a002fbf7c2e9e0ee18d925fb36be5d888b0fdfcfda5fb5684", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4b85210b0ce86c7a002fbf7c2e9e0ee18d925fb36be5d888b0fdfcfda5fb5684", kill_on_drop: false }` [INFO] [stdout] 4b85210b0ce86c7a002fbf7c2e9e0ee18d925fb36be5d888b0fdfcfda5fb5684