[INFO] fetching crate fasten 0.4.4... [INFO] testing fasten-0.4.4 against try#5bc97a20e5cc382ae6d19f727a9e73eeb2734548 for pr-99093 [INFO] extracting crate fasten 0.4.4 into /workspace/builds/worker-8/source [INFO] validating manifest of crates.io crate fasten 0.4.4 on toolchain 5bc97a20e5cc382ae6d19f727a9e73eeb2734548 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate fasten 0.4.4 [INFO] finished tweaking crates.io crate fasten 0.4.4 [INFO] tweaked toml for crates.io crate fasten 0.4.4 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate crates.io crate fasten 0.4.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2467635cea3b2362f758b806d41635ec9670906b9f3e2425b8ef1f34343a6308 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2467635cea3b2362f758b806d41635ec9670906b9f3e2425b8ef1f34343a6308", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2467635cea3b2362f758b806d41635ec9670906b9f3e2425b8ef1f34343a6308", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2467635cea3b2362f758b806d41635ec9670906b9f3e2425b8ef1f34343a6308", kill_on_drop: false }` [INFO] [stdout] 2467635cea3b2362f758b806d41635ec9670906b9f3e2425b8ef1f34343a6308 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d55aafe7d474aaf5447287cd78fc1d3593a19b8915a0672606fb0fd555d0bc9a [INFO] running `Command { std: "docker" "start" "-a" "d55aafe7d474aaf5447287cd78fc1d3593a19b8915a0672606fb0fd555d0bc9a", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling libc v0.2.101 [INFO] [stderr] Compiling cc v1.0.69 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling rustc-serialize v0.3.24 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling ucd-util v0.1.8 [INFO] [stderr] Compiling owning_ref v0.2.4 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling futures v0.1.31 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling utf8-ranges v1.0.4 [INFO] [stderr] Compiling crossbeam v0.2.12 [INFO] [stderr] Compiling smallvec v0.3.4 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling getopts v0.2.21 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling smallvec v0.6.14 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling lz4-sys v1.9.2 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling thread-id v3.3.0 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling time v0.1.44 [INFO] [stderr] Compiling threadpool v1.8.1 [INFO] [stderr] Compiling flate2 v1.0.20 [INFO] [stderr] Compiling parking_lot_core v0.2.14 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling bam v0.1.4 [INFO] [stderr] Compiling parking_lot v0.3.8 [INFO] [stderr] Compiling num-bigint v0.1.44 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling multiqueue v0.3.2 [INFO] [stderr] Compiling num-rational v0.1.42 [INFO] [stderr] Compiling num v0.1.42 [INFO] [stderr] Compiling statistical v0.1.1 [INFO] [stderr] Compiling lz4 v1.23.2 [INFO] [stderr] Compiling fastq v0.6.0 [INFO] [stderr] Compiling fasten v0.4.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 07s [INFO] running `Command { std: "docker" "inspect" "d55aafe7d474aaf5447287cd78fc1d3593a19b8915a0672606fb0fd555d0bc9a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d55aafe7d474aaf5447287cd78fc1d3593a19b8915a0672606fb0fd555d0bc9a", kill_on_drop: false }` [INFO] [stdout] d55aafe7d474aaf5447287cd78fc1d3593a19b8915a0672606fb0fd555d0bc9a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 912f16f8388d0101847689e284981b2e2c2d802d77be52316c4abf91a3d08cf9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "912f16f8388d0101847689e284981b2e2c2d802d77be52316c4abf91a3d08cf9", kill_on_drop: false }` [INFO] [stderr] Compiling fasten v0.4.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 11.61s [INFO] running `Command { std: "docker" "inspect" "912f16f8388d0101847689e284981b2e2c2d802d77be52316c4abf91a3d08cf9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "912f16f8388d0101847689e284981b2e2c2d802d77be52316c4abf91a3d08cf9", kill_on_drop: false }` [INFO] [stdout] 912f16f8388d0101847689e284981b2e2c2d802d77be52316c4abf91a3d08cf9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 37290975d206b3699aaec814bb696ebdf8559cacd40a424cecf57d9c92ade6a3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "37290975d206b3699aaec814bb696ebdf8559cacd40a424cecf57d9c92ade6a3", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/fasten-e8591752f95ac2fc) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test io::fastq::test_the_fast_reader ... ok [INFO] [stdout] test io::seq::test_new_seq ... ok [INFO] [stdout] test io::fastq::test_the_careful_reader ... ok [INFO] [stdout] test io::seq::test_cleanable ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_clean.rs (/opt/rustwide/target/debug/deps/fasten_clean-54c043ad0e3dd30b) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test test_clean_entry_basic ... ok [INFO] [stdout] test test_clean_entry ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_combine.rs (/opt/rustwide/target/debug/deps/fasten_combine-225da17151d48e82) [INFO] [stderr] Running unittests src/bin/fasten_convert.rs (/opt/rustwide/target/debug/deps/fasten_convert-cde79ea6de985003) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_kmer.rs (/opt/rustwide/target/debug/deps/fasten_kmer-5667a2a3b4536c6e) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test test_kmer_counting_homopolymers ... ok [INFO] [stderr] Running unittests src/bin/fasten_metrics.rs (/opt/rustwide/target/debug/deps/fasten_metrics-bd34406a812f1117) [INFO] [stdout] test test_kmer_counting_4mers ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Running unittests src/bin/fasten_mutate.rs (/opt/rustwide/target/debug/deps/fasten_mutate-c50069b1b85b723f) [INFO] [stdout] test test_average_quality ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_pe.rs (/opt/rustwide/target/debug/deps/fasten_pe-22add2ad429a171d) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_progress.rs (/opt/rustwide/target/debug/deps/fasten_progress-fe7fb22f8c4cb58b) [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_quality_filter.rs (/opt/rustwide/target/debug/deps/fasten_quality_filter-c177bf2fa8c4e63a) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_randomize.rs (/opt/rustwide/target/debug/deps/fasten_randomize-83c8c012c7c8e873) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_regex.rs (/opt/rustwide/target/debug/deps/fasten_regex-05dbb93f210fa74e) [INFO] [stderr] Running unittests src/bin/fasten_replace.rs (/opt/rustwide/target/debug/deps/fasten_replace-b5cd0a8fc94489b6) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_sample.rs (/opt/rustwide/target/debug/deps/fasten_sample-aa715b6326641e18) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_shuffle.rs (/opt/rustwide/target/debug/deps/fasten_shuffle-4c9ee53a2cb5ad93) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_sort.rs (/opt/rustwide/target/debug/deps/fasten_sort-05e7c09e84146b2a) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test test_sort_fastq_basic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_straighten.rs (/opt/rustwide/target/debug/deps/fasten_straighten-0f4c388ca99791d4) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test challenge_dataset ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_trim.rs (/opt/rustwide/target/debug/deps/fasten_trim-82169ecac25d2a8d) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/fasten_validate.rs (/opt/rustwide/target/debug/deps/fasten_validate-a3a8bf31f3392166) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests fasten [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "37290975d206b3699aaec814bb696ebdf8559cacd40a424cecf57d9c92ade6a3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "37290975d206b3699aaec814bb696ebdf8559cacd40a424cecf57d9c92ade6a3", kill_on_drop: false }` [INFO] [stdout] 37290975d206b3699aaec814bb696ebdf8559cacd40a424cecf57d9c92ade6a3