[INFO] fetching crate chiral-db 0.1.0... [INFO] testing chiral-db-0.1.0 against try#5bc97a20e5cc382ae6d19f727a9e73eeb2734548 for pr-99093 [INFO] extracting crate chiral-db 0.1.0 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate chiral-db 0.1.0 on toolchain 5bc97a20e5cc382ae6d19f727a9e73eeb2734548 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate chiral-db 0.1.0 [INFO] finished tweaking crates.io crate chiral-db 0.1.0 [INFO] tweaked toml for crates.io crate chiral-db 0.1.0 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ecb52c4cf6672b83cc996368a05b4a059042425f2b6ba9cd23a06cdead5d8d70" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 70054a4a515a6b4c59b3984755da0dfbbe8f4e384176ab1efd440ec937866c55 [INFO] running `Command { std: "docker" "start" "-a" "70054a4a515a6b4c59b3984755da0dfbbe8f4e384176ab1efd440ec937866c55", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "70054a4a515a6b4c59b3984755da0dfbbe8f4e384176ab1efd440ec937866c55", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "70054a4a515a6b4c59b3984755da0dfbbe8f4e384176ab1efd440ec937866c55", kill_on_drop: false }` [INFO] [stdout] 70054a4a515a6b4c59b3984755da0dfbbe8f4e384176ab1efd440ec937866c55 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ecb52c4cf6672b83cc996368a05b4a059042425f2b6ba9cd23a06cdead5d8d70" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 228eb1429343e7413f15c0bec47034e4a5aabbca104043b1a8e896aa75988aa1 [INFO] running `Command { std: "docker" "start" "-a" "228eb1429343e7413f15c0bec47034e4a5aabbca104043b1a8e896aa75988aa1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.40 [INFO] [stderr] Compiling quote v1.0.20 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling unicode-ident v1.0.2 [INFO] [stderr] Compiling syn v1.0.98 [INFO] [stderr] Compiling libc v0.2.126 [INFO] [stderr] Compiling scratch v1.0.1 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling cxxbridge-flags v1.0.72 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling once_cell v1.13.0 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.16 [INFO] [stderr] Compiling serde v1.0.139 [INFO] [stderr] Compiling serde_derive v1.0.139 [INFO] [stderr] Compiling codespan-reporting v0.11.1 [INFO] [stderr] Compiling link-cplusplus v1.0.6 [INFO] [stderr] Compiling cxx v1.0.72 [INFO] [stderr] Compiling getrandom v0.2.7 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling toml v0.5.9 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling chiral-db-sources v0.1.0 [INFO] [stderr] Compiling cxx-build v1.0.72 [INFO] [stderr] Compiling cxxbridge-macro v1.0.72 [INFO] [stderr] Compiling openbabel-sys v0.1.7+openbabel-3.1.1 [INFO] [stderr] Compiling openbabel v0.3.2 [INFO] [stderr] Compiling chiral-db v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 55s [INFO] running `Command { std: "docker" "inspect" "228eb1429343e7413f15c0bec47034e4a5aabbca104043b1a8e896aa75988aa1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "228eb1429343e7413f15c0bec47034e4a5aabbca104043b1a8e896aa75988aa1", kill_on_drop: false }` [INFO] [stdout] 228eb1429343e7413f15c0bec47034e4a5aabbca104043b1a8e896aa75988aa1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ecb52c4cf6672b83cc996368a05b4a059042425f2b6ba9cd23a06cdead5d8d70" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 80646852d0a1f2803a8840c41fa87be5935bb1dc8fe050ec67ec2a5060ff7b53 [INFO] running `Command { std: "docker" "start" "-a" "80646852d0a1f2803a8840c41fa87be5935bb1dc8fe050ec67ec2a5060ff7b53", kill_on_drop: false }` [INFO] [stderr] Compiling chiral-db v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.90s [INFO] running `Command { std: "docker" "inspect" "80646852d0a1f2803a8840c41fa87be5935bb1dc8fe050ec67ec2a5060ff7b53", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80646852d0a1f2803a8840c41fa87be5935bb1dc8fe050ec67ec2a5060ff7b53", kill_on_drop: false }` [INFO] [stdout] 80646852d0a1f2803a8840c41fa87be5935bb1dc8fe050ec67ec2a5060ff7b53 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ecb52c4cf6672b83cc996368a05b4a059042425f2b6ba9cd23a06cdead5d8d70" "/opt/rustwide/cargo-home/bin/cargo" "+5bc97a20e5cc382ae6d19f727a9e73eeb2734548" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b80fa678e896de1b42d4671b9309935200e8e0d395cd457edeed390db16000b1 [INFO] running `Command { std: "docker" "start" "-a" "b80fa678e896de1b42d4671b9309935200e8e0d395cd457edeed390db16000b1", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.04s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/chiral_db-c75744ba9d55b15c) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test config::test_config::test_fp_doc ... ok [INFO] [stdout] test fingerprint::test_fp::test_kind ... ok [INFO] [stdout] test fingerprint::test_fp::test_new_from_smiles_vec ... ok [INFO] [stdout] test similarity::test_similarity::test_tanimoto ... ok [INFO] [stdout] test fingerprint::test_fp::test_new_from_chembl ... ok [INFO] [stdout] test similarity::test_similarity::test_query_similarity ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.18s [INFO] [stdout] [INFO] [stderr] Doc-tests chiral-db [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test src/fingerprint.rs - fingerprint (line 6) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 4.08s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b80fa678e896de1b42d4671b9309935200e8e0d395cd457edeed390db16000b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b80fa678e896de1b42d4671b9309935200e8e0d395cd457edeed390db16000b1", kill_on_drop: false }` [INFO] [stdout] b80fa678e896de1b42d4671b9309935200e8e0d395cd457edeed390db16000b1