[INFO] fetching crate openbabel 0.3.2... [INFO] testing openbabel-0.3.2 against master#0e21a27075a8c508f00d1a4430497f17ce93d5c9 for pr-98839 [INFO] extracting crate openbabel 0.3.2 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate openbabel 0.3.2 on toolchain 0e21a27075a8c508f00d1a4430497f17ce93d5c9 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate openbabel 0.3.2 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate openbabel 0.3.2 [INFO] tweaked toml for crates.io crate openbabel 0.3.2 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate openbabel 0.3.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded cxx-build v1.0.68 [INFO] [stderr] Downloaded cxx v1.0.67 [INFO] [stderr] Downloaded cxxbridge-macro v1.0.67 [INFO] [stderr] Downloaded cxxbridge-flags v1.0.67 [INFO] [stderr] Downloaded openbabel-sys v0.1.7+openbabel-3.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 68b7cab15a2328ab4e42f51af6d9e86755faded98f778acd825b220db65c9841 [INFO] running `Command { std: "docker" "start" "-a" "68b7cab15a2328ab4e42f51af6d9e86755faded98f778acd825b220db65c9841", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "68b7cab15a2328ab4e42f51af6d9e86755faded98f778acd825b220db65c9841", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "68b7cab15a2328ab4e42f51af6d9e86755faded98f778acd825b220db65c9841", kill_on_drop: false }` [INFO] [stdout] 68b7cab15a2328ab4e42f51af6d9e86755faded98f778acd825b220db65c9841 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 50b3f6a6b12ad2b61bdd542a5656fc9aae455c9e4bfd3a0facbe85b4444a99fb [INFO] running `Command { std: "docker" "start" "-a" "50b3f6a6b12ad2b61bdd542a5656fc9aae455c9e4bfd3a0facbe85b4444a99fb", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.37 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.91 [INFO] [stderr] Compiling scratch v1.0.1 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling cxxbridge-flags v1.0.67 [INFO] [stderr] Compiling once_cell v1.12.0 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Compiling codespan-reporting v0.11.1 [INFO] [stderr] Compiling quote v1.0.18 [INFO] [stderr] Compiling link-cplusplus v1.0.6 [INFO] [stderr] Compiling cxx v1.0.67 [INFO] [stderr] Compiling cxx-build v1.0.68 [INFO] [stderr] Compiling cxxbridge-macro v1.0.67 [INFO] [stderr] Compiling openbabel-sys v0.1.7+openbabel-3.1.1 [INFO] [stderr] Compiling openbabel v0.3.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 40s [INFO] running `Command { std: "docker" "inspect" "50b3f6a6b12ad2b61bdd542a5656fc9aae455c9e4bfd3a0facbe85b4444a99fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "50b3f6a6b12ad2b61bdd542a5656fc9aae455c9e4bfd3a0facbe85b4444a99fb", kill_on_drop: false }` [INFO] [stdout] 50b3f6a6b12ad2b61bdd542a5656fc9aae455c9e4bfd3a0facbe85b4444a99fb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 44770aafc16e3af8a582ef9ec6747f11dd278373631d4b6a9cdbabefa262794a [INFO] running `Command { std: "docker" "start" "-a" "44770aafc16e3af8a582ef9ec6747f11dd278373631d4b6a9cdbabefa262794a", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling serde v1.0.137 [INFO] [stderr] Compiling crossbeam-utils v0.8.8 [INFO] [stderr] Compiling semver v1.0.9 [INFO] [stderr] Compiling libc v0.2.126 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling rayon-core v1.9.3 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling serde_json v1.0.81 [INFO] [stderr] Compiling ryu v1.0.10 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling serde_derive v1.0.137 [INFO] [stderr] Compiling plotters-backend v0.3.2 [INFO] [stderr] Compiling itoa v1.0.2 [INFO] [stderr] Compiling regex-syntax v0.6.26 [INFO] [stderr] Compiling half v1.8.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling oorandom v11.1.3 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling walkdir v2.3.2 [INFO] [stderr] Compiling plotters-svg v0.3.1 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling crossbeam-channel v0.5.4 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.8 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling rayon v1.5.3 [INFO] [stderr] Compiling cast v0.2.7 [INFO] [stderr] Compiling regex v1.5.6 [INFO] [stderr] Compiling criterion-plot v0.4.4 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling num_cpus v1.13.1 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling plotters v0.3.1 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling serde_cbor v0.11.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling criterion v0.3.5 [INFO] [stderr] Compiling openbabel v0.3.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 22.02s [INFO] running `Command { std: "docker" "inspect" "44770aafc16e3af8a582ef9ec6747f11dd278373631d4b6a9cdbabefa262794a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "44770aafc16e3af8a582ef9ec6747f11dd278373631d4b6a9cdbabefa262794a", kill_on_drop: false }` [INFO] [stdout] 44770aafc16e3af8a582ef9ec6747f11dd278373631d4b6a9cdbabefa262794a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 41273ef8812fae86bc85681070fef5f8f925c7771ef6c96dcea41eb40c7e63c2 [INFO] running `Command { std: "docker" "start" "-a" "41273ef8812fae86bc85681070fef5f8f925c7771ef6c96dcea41eb40c7e63c2", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.41s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/openbabel-78f979c53800257b) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test molecule::test_mod_molecule::test_molecule ... ok [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/deps/openbabel-78f979c53800257b` (signal: 11, SIGSEGV: invalid memory reference) [INFO] running `Command { std: "docker" "inspect" "41273ef8812fae86bc85681070fef5f8f925c7771ef6c96dcea41eb40c7e63c2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "41273ef8812fae86bc85681070fef5f8f925c7771ef6c96dcea41eb40c7e63c2", kill_on_drop: false }` [INFO] [stdout] 41273ef8812fae86bc85681070fef5f8f925c7771ef6c96dcea41eb40c7e63c2