[INFO] fetching crate biodiff 1.0.1...
[INFO] testing biodiff-1.0.1 against master#0e21a27075a8c508f00d1a4430497f17ce93d5c9 for pr-98839
[INFO] extracting crate biodiff 1.0.1 into /workspace/builds/worker-1/source
[INFO] validating manifest of crates.io crate biodiff 1.0.1 on toolchain 0e21a27075a8c508f00d1a4430497f17ce93d5c9
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate biodiff 1.0.1
[INFO] finished tweaking crates.io crate biodiff 1.0.1
[INFO] tweaked toml for crates.io crate biodiff 1.0.1 written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate crates.io crate biodiff 1.0.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded getset v0.1.2
[INFO] [stderr]   Downloaded bio-types v0.12.1
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded bio v0.40.0
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded cursive v0.17.0
[INFO] [stderr]   Downloaded enum-map-derive v0.6.0
[INFO] [stderr]   Downloaded anyhow v1.0.53
[INFO] [stderr]   Downloaded num_threads v0.1.3
[INFO] [stderr]   Downloaded enumset_derive v0.5.5
[INFO] [stderr]   Downloaded enumset v1.0.8
[INFO] [stderr]   Downloaded matrixmultiply v0.3.2
[INFO] [stderr]   Downloaded nalgebra v0.27.1
[INFO] [stderr]   Downloaded time v0.3.7
[INFO] [stderr]   Downloaded ndarray v0.15.4
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded simba v0.5.1
[INFO] [stderr]   Downloaded hexagex v0.1.1
[INFO] [stderr]   Downloaded statrs v0.15.0
[INFO] [stderr]   Downloaded memmap2 v0.5.3
[INFO] [stderr]   Downloaded realfft v3.0.0
[INFO] [stderr]   Downloaded nalgebra-macros v0.1.0
[INFO] [stderr]   Downloaded enum-map v1.1.1
[INFO] [stderr]   Downloaded enum-map v2.0.1
[INFO] [stderr]   Downloaded cursive_core v0.3.1
[INFO] [stderr]   Downloaded enum-map-derive v0.8.0
[INFO] [stderr]   Downloaded cursive_buffered_backend v0.6.0
[INFO] [stderr]   Downloaded libc v0.2.117
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 160a47321f6e42a984ff2952b2d4aee6b76ad6bc7e6c9debab26532c9ef6c276
[INFO] running `Command { std: "docker" "start" "-a" "160a47321f6e42a984ff2952b2d4aee6b76ad6bc7e6c9debab26532c9ef6c276", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "160a47321f6e42a984ff2952b2d4aee6b76ad6bc7e6c9debab26532c9ef6c276", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "160a47321f6e42a984ff2952b2d4aee6b76ad6bc7e6c9debab26532c9ef6c276", kill_on_drop: false }`
[INFO] [stdout] 160a47321f6e42a984ff2952b2d4aee6b76ad6bc7e6c9debab26532c9ef6c276
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 268913474a2dab790b3ccf68a0a5369dd1780a7dda07f9671228c9d54b17d1b2
[INFO] running `Command { std: "docker" "start" "-a" "268913474a2dab790b3ccf68a0a5369dd1780a7dda07f9671228c9d54b17d1b2", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.36
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[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling serde_derive v1.0.136
[INFO] [stderr]    Compiling memchr v2.4.1
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[INFO] [stderr]    Compiling serde v1.0.136
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[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling semver v0.1.20
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[INFO] [stderr]    Compiling rustversion v1.0.6
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[INFO] [stderr]    Compiling num_threads v0.1.3
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[INFO] [stderr]    Compiling itertools v0.10.3
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[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
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[INFO] [stderr]    Compiling num-iter v0.1.42
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[INFO] [stderr]    Compiling fxhash v0.2.1
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[INFO] [stderr]    Compiling crossbeam-channel v0.5.2
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[INFO] [stderr]    Compiling quote v1.0.15
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[INFO] [stderr]    Compiling signal-hook-registry v1.4.0
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[INFO] [stderr]    Compiling dirs-sys v0.3.6
[INFO] [stderr]    Compiling memmap2 v0.5.3
[INFO] [stderr]    Compiling num_cpus v1.13.1
[INFO] [stderr]    Compiling rand_core v0.6.3
[INFO] [stderr]    Compiling dirs v4.0.0
[INFO] [stderr]    Compiling parking_lot v0.11.2
[INFO] [stderr]    Compiling num-complex v0.4.0
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[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v1.1.1
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling petgraph v0.6.0
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling signal-hook-mio v0.2.1
[INFO] [stderr]    Compiling transpose v0.2.1
[INFO] [stderr]    Compiling primal-check v0.3.1
[INFO] [stderr]    Compiling simba v0.5.1
[INFO] [stderr]    Compiling ndarray v0.15.4
[INFO] [stderr]    Compiling crossterm v0.22.1
[INFO] [stderr]    Compiling rand v0.8.4
[INFO] [stderr]    Compiling rustfft v6.0.1
[INFO] [stderr]    Compiling num v0.4.0
[INFO] [stderr]    Compiling hexagex v0.1.1
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling darling_core v0.13.1
[INFO] [stderr]    Compiling realfft v3.0.0
[INFO] [stderr]    Compiling darling_macro v0.13.1
[INFO] [stderr]    Compiling enum-map-derive v0.8.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.30
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling enum-map-derive v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]    Compiling getset v0.1.2
[INFO] [stderr]    Compiling nalgebra v0.27.1
[INFO] [stderr]    Compiling enum-map v2.0.1
[INFO] [stderr]    Compiling enum-map v1.1.1
[INFO] [stderr]    Compiling darling v0.13.1
[INFO] [stderr]    Compiling enumset_derive v0.5.5
[INFO] [stderr]    Compiling thiserror v1.0.30
[INFO] [stderr]    Compiling bio-types v0.12.1
[INFO] [stderr]    Compiling enumset v1.0.8
[INFO] [stderr]    Compiling cursive_core v0.3.1
[INFO] [stderr]    Compiling statrs v0.15.0
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.8.3
[INFO] [stderr]    Compiling cursive_buffered_backend v0.6.0
[INFO] [stderr]    Compiling cursive v0.17.0
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling bio v0.40.0
[INFO] [stderr]    Compiling biodiff v1.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 58.12s
[INFO] running `Command { std: "docker" "inspect" "268913474a2dab790b3ccf68a0a5369dd1780a7dda07f9671228c9d54b17d1b2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "268913474a2dab790b3ccf68a0a5369dd1780a7dda07f9671228c9d54b17d1b2", kill_on_drop: false }`
[INFO] [stdout] 268913474a2dab790b3ccf68a0a5369dd1780a7dda07f9671228c9d54b17d1b2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 07f569c63b7f2eba31911c92fe622de52065d228bdb523895e69f1d911cf5525
[INFO] running `Command { std: "docker" "start" "-a" "07f569c63b7f2eba31911c92fe622de52065d228bdb523895e69f1d911cf5525", kill_on_drop: false }`
[INFO] [stderr]    Compiling biodiff v1.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.28s
[INFO] running `Command { std: "docker" "inspect" "07f569c63b7f2eba31911c92fe622de52065d228bdb523895e69f1d911cf5525", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "07f569c63b7f2eba31911c92fe622de52065d228bdb523895e69f1d911cf5525", kill_on_drop: false }`
[INFO] [stdout] 07f569c63b7f2eba31911c92fe622de52065d228bdb523895e69f1d911cf5525
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5873ed620acfc3295992aedd9294443d62a478a48ba243bc5e6c4f5abaffa05f" "/opt/rustwide/cargo-home/bin/cargo" "+0e21a27075a8c508f00d1a4430497f17ce93d5c9" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 1a5ee25970dafaac40d5f0fa2f0988f2dc90d5c1c3eca56fc8719ce00b15d6a4
[INFO] running `Command { std: "docker" "start" "-a" "1a5ee25970dafaac40d5f0fa2f0988f2dc90d5c1c3eca56fc8719ce00b15d6a4", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.07s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/biodiff-9b19b3f2f8351d6e)
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test datastruct::tests::common_sequence_iter ... ok
[INFO] [stdout] test datastruct::tests::doublevec ... ok
[INFO] [stdout] test datastruct::tests::bsearch ... ok
[INFO] [stdout] test util::tests::ent ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/git-biodiff.rs (/opt/rustwide/target/debug/deps/git_biodiff-048453572fb53d7d)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "1a5ee25970dafaac40d5f0fa2f0988f2dc90d5c1c3eca56fc8719ce00b15d6a4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1a5ee25970dafaac40d5f0fa2f0988f2dc90d5c1c3eca56fc8719ce00b15d6a4", kill_on_drop: false }`
[INFO] [stdout] 1a5ee25970dafaac40d5f0fa2f0988f2dc90d5c1c3eca56fc8719ce00b15d6a4