[INFO] cloning repository https://github.com/HopedWall/GFAtoVCF
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HopedWall/GFAtoVCF" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8960fd42cada8e94d81c8391405e0df59045a60a
[INFO] checking HopedWall/GFAtoVCF against master#9a42c6509d399fd205917ebce474b31315c5d3e9 for pr-97427
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF" "/workspace/builds/worker-17/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-17/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/HopedWall/GFAtoVCF on toolchain 9a42c6509d399fd205917ebce474b31315c5d3e9
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9a42c6509d399fd205917ebce474b31315c5d3e9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/HopedWall/GFAtoVCF
[INFO] finished tweaking git repo https://github.com/HopedWall/GFAtoVCF
[INFO] tweaked toml for git repo https://github.com/HopedWall/GFAtoVCF written to /workspace/builds/worker-17/source/Cargo.toml
[INFO] crate git repo https://github.com/HopedWall/GFAtoVCF already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+9a42c6509d399fd205917ebce474b31315c5d3e9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded priority-queue v1.2.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-17/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-17/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ac0d0aa6ec8ed129e241004a6179c99fa0d2616f50ba759c5b60bd26d0fafa02" "/opt/rustwide/cargo-home/bin/cargo" "+9a42c6509d399fd205917ebce474b31315c5d3e9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d4f003752b25d57facab0f978471eff2671b702b5ffbb9d561af831fb8e916b6
[INFO] running `Command { std: "docker" "start" "-a" "d4f003752b25d57facab0f978471eff2671b702b5ffbb9d561af831fb8e916b6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d4f003752b25d57facab0f978471eff2671b702b5ffbb9d561af831fb8e916b6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d4f003752b25d57facab0f978471eff2671b702b5ffbb9d561af831fb8e916b6", kill_on_drop: false }`
[INFO] [stdout] d4f003752b25d57facab0f978471eff2671b702b5ffbb9d561af831fb8e916b6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-17/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-17/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ac0d0aa6ec8ed129e241004a6179c99fa0d2616f50ba759c5b60bd26d0fafa02" "/opt/rustwide/cargo-home/bin/cargo" "+9a42c6509d399fd205917ebce474b31315c5d3e9" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c697c140f163adc8f6466e7413c1fc095b4dd470556481d36dedad409455cbbb
[INFO] running `Command { std: "docker" "start" "-a" "c697c140f163adc8f6466e7413c1fc095b4dd470556481d36dedad409455cbbb", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling libc v0.2.112
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]     Checking bitflags v1.3.2
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling lexical-core v0.7.6
[INFO] [stderr]     Checking arrayvec v0.5.2
[INFO] [stderr]     Checking ryu v1.0.9
[INFO] [stderr]     Checking static_assertions v1.1.0
[INFO] [stderr]     Checking regex-syntax v0.6.25
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]     Checking unicode-width v0.1.9
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]     Checking strsim v0.8.0
[INFO] [stderr]     Checking ansi_term v0.12.1
[INFO] [stderr]     Checking json v0.12.4
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling indexmap v1.8.0
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling priority-queue v1.2.1
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking time v0.1.44
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]     Checking petgraph v0.5.1
[INFO] [stderr]     Checking regex v1.5.4
[INFO] [stderr]     Checking chrono v0.4.19
[INFO] [stderr]     Checking gfa v0.2.3
[INFO] [stderr]     Checking handlegraph v0.2.0
[INFO] [stderr]     Checking gfa_to_vcf v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 5.75s
[INFO] running `Command { std: "docker" "inspect" "c697c140f163adc8f6466e7413c1fc095b4dd470556481d36dedad409455cbbb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c697c140f163adc8f6466e7413c1fc095b4dd470556481d36dedad409455cbbb", kill_on_drop: false }`
[INFO] [stdout] c697c140f163adc8f6466e7413c1fc095b4dd470556481d36dedad409455cbbb