[INFO] fetching crate matchtigs 1.2.0... [INFO] checking matchtigs-1.2.0 against master#43d9f3859e0204e764161ee085a360274b5f3e9a for pr-97346 [INFO] extracting crate matchtigs 1.2.0 into /workspace/builds/worker-10/source [INFO] validating manifest of crates.io crate matchtigs 1.2.0 on toolchain 43d9f3859e0204e764161ee085a360274b5f3e9a [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+43d9f3859e0204e764161ee085a360274b5f3e9a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate matchtigs 1.2.0 [INFO] finished tweaking crates.io crate matchtigs 1.2.0 [INFO] tweaked toml for crates.io crate matchtigs 1.2.0 written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate crates.io crate matchtigs 1.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+43d9f3859e0204e764161ee085a360274b5f3e9a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded permutation v0.4.0 [INFO] [stderr] Downloaded bio v0.39.2 [INFO] [stderr] Downloaded opaque_typedef v0.0.5 [INFO] [stderr] Downloaded traitgraph v0.10.0 [INFO] [stderr] Downloaded traitgraph-algo v0.10.1 [INFO] [stderr] Downloaded opaque_typedef_macros v0.0.5 [INFO] [stderr] Downloaded bigraph v0.8.0 [INFO] [stderr] Downloaded compact-genome v0.8.0 [INFO] [stderr] Downloaded traitsequence v0.10.0 [INFO] [stderr] Downloaded genome-graph v0.8.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ac0d0aa6ec8ed129e241004a6179c99fa0d2616f50ba759c5b60bd26d0fafa02" "/opt/rustwide/cargo-home/bin/cargo" "+43d9f3859e0204e764161ee085a360274b5f3e9a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] ddb818753a8bc7ea43883f35ab7df5c167ad1331f77442b3fe11c8fa3dc06dfd [INFO] running `Command { std: "docker" "start" "-a" "ddb818753a8bc7ea43883f35ab7df5c167ad1331f77442b3fe11c8fa3dc06dfd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ddb818753a8bc7ea43883f35ab7df5c167ad1331f77442b3fe11c8fa3dc06dfd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ddb818753a8bc7ea43883f35ab7df5c167ad1331f77442b3fe11c8fa3dc06dfd", kill_on_drop: false }` [INFO] [stdout] ddb818753a8bc7ea43883f35ab7df5c167ad1331f77442b3fe11c8fa3dc06dfd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ac0d0aa6ec8ed129e241004a6179c99fa0d2616f50ba759c5b60bd26d0fafa02" "/opt/rustwide/cargo-home/bin/cargo" "+43d9f3859e0204e764161ee085a360274b5f3e9a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] afac42139831b11fe770a1d6f90444fea280be9a35f157c30886871702782f2f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "afac42139831b11fe770a1d6f90444fea280be9a35f157c30886871702782f2f", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.36 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.90 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling libc v0.2.121 [INFO] [stderr] Compiling libm v0.2.2 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Checking hashbrown v0.11.2 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling unicode-segmentation v1.9.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.8 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling typenum v1.15.0 [INFO] [stderr] Compiling rustversion v1.0.6 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling radium v0.6.2 [INFO] [stderr] Compiling paste v1.0.7 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking traitsequence v0.10.0 [INFO] [stderr] Checking tap v1.0.1 [INFO] [stderr] Compiling anyhow v1.0.56 [INFO] [stderr] Checking regex-syntax v0.6.25 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking bitvector v0.1.5 [INFO] [stderr] Checking once_cell v1.10.0 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking gimli v0.26.1 [INFO] [stderr] Compiling log v0.4.16 [INFO] [stderr] Compiling ref-cast v1.0.6 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking itoa v0.4.8 [INFO] [stderr] Compiling crossbeam-queue v0.3.5 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking ryu v1.0.9 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking rustc-demangle v0.1.21 [INFO] [stderr] Compiling strum v0.15.0 [INFO] [stderr] Checking fixedbitset v0.4.1 [INFO] [stderr] Checking funty v1.2.0 [INFO] [stderr] Checking strum v0.23.0 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking termcolor v1.1.3 [INFO] [stderr] Checking bytecount v0.6.2 [INFO] [stderr] Checking opaque_typedef v0.0.5 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Checking strsim v0.10.0 [INFO] [stderr] Checking textwrap v0.15.0 [INFO] [stderr] Checking bitflags v1.3.2 [INFO] [stderr] Checking permutation v0.4.0 [INFO] [stderr] Checking atomic-counter v1.0.1 [INFO] [stderr] Checking disjoint-sets v0.4.2 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Checking wyz v0.4.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling ahash v0.7.6 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling indexmap v1.8.1 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.8 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking itertools v0.10.3 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking bitvec v0.22.3 [INFO] [stderr] Checking crossbeam-channel v0.5.4 [INFO] [stderr] Checking aho-corasick v0.7.18 [INFO] [stderr] Checking object v0.27.1 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking os_str_bytes v6.0.0 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling quote v1.0.17 [INFO] [stderr] Checking getrandom v0.2.6 [INFO] [stderr] Checking time v0.1.43 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Compiling backtrace v0.3.64 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking petgraph v0.6.0 [INFO] [stderr] Checking regex v1.5.5 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking crossbeam-deque v0.8.1 [INFO] [stderr] Checking num-complex v0.4.0 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking ordered-float v1.1.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking hashbrown v0.12.0 [INFO] [stderr] Checking crossbeam v0.8.1 [INFO] [stderr] Checking addr2line v0.17.0 [INFO] [stderr] Checking chrono v0.4.19 [INFO] [stderr] Checking simba v0.5.1 [INFO] [stderr] Checking ndarray v0.15.4 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking traitgraph v0.10.0 [INFO] [stderr] Checking simplelog v0.11.2 [INFO] [stderr] Checking traitgraph-algo v0.10.1 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling ref-cast-impl v1.0.6 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling clap_derive v3.1.4 [INFO] [stderr] Compiling strum_macros v0.15.0 [INFO] [stderr] Checking enum-map v1.1.1 [INFO] [stderr] Checking compact-genome v0.8.0 [INFO] [stderr] Checking nalgebra v0.27.1 [INFO] [stderr] Checking thiserror v1.0.30 [INFO] [stderr] Checking clap v3.1.6 [INFO] [stderr] Checking bio-types v0.12.1 [INFO] [stderr] Compiling opaque_typedef_macros v0.0.5 [INFO] [stderr] Checking bigraph v0.8.0 [INFO] [stderr] Checking bstr v0.2.17 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking csv v1.1.6 [INFO] [stderr] Checking statrs v0.15.0 [INFO] [stderr] Checking bio v0.39.2 [INFO] [stderr] Checking genome-graph v0.8.0 [INFO] [stderr] Checking matchtigs v1.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 46s [INFO] running `Command { std: "docker" "inspect" "afac42139831b11fe770a1d6f90444fea280be9a35f157c30886871702782f2f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "afac42139831b11fe770a1d6f90444fea280be9a35f157c30886871702782f2f", kill_on_drop: false }` [INFO] [stdout] afac42139831b11fe770a1d6f90444fea280be9a35f157c30886871702782f2f