[INFO] cloning repository https://github.com/Cardosaum/cdr3-parser [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Cardosaum/cdr3-parser" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCardosaum%2Fcdr3-parser", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCardosaum%2Fcdr3-parser'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c2bf5d1c91df652b60451b8dac65d97f2f74a5d3 [INFO] building Cardosaum/cdr3-parser against master#222c5724ecc922fe67815f428c19f82c129d9386 for pr-97334 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCardosaum%2Fcdr3-parser" "/workspace/builds/worker-30/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-30/source'... 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Compiling serde_with_macros v1.4.2 [INFO] [stderr] Compiling bstr v0.2.16 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling serde_with v1.9.3 [INFO] [stderr] Compiling jemallocator v0.3.2 [INFO] [stderr] Compiling cdr3-parser v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `sequence` [INFO] [stdout] --> src/cdr3/cdr3.rs:121:24 [INFO] [stdout] | [INFO] [stdout] 121 | pub fn aa_groups<'seq>(sequence: String) -> BTreeMap> { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sequence` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `v` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:322:22 [INFO] [stdout] | [INFO] [stdout] 322 | for (aa, v) in &self.count_amino_acids() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_v` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `v` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:360:30 [INFO] [stdout] | [INFO] [stdout] 360 | .filter(|(k, v)| **k == 'Y' || **k == 'W' || **k == 'F') [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_v` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `k` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:361:24 [INFO] [stdout] | [INFO] [stdout] 361 | .map(|(k, v)| *v) [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `n` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:520:25 [INFO] [stdout] | [INFO] [stdout] 520 | if let Some(n) = pKnterminal.get_mut(&nterm) {} [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_n` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:272:49 [INFO] [stdout] | [INFO] [stdout] 272 | pub fn new(sequence: &str, quantity: usize, mut pH: Option) -> Self { [INFO] [stdout] | ----^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:502:17 [INFO] [stdout] | [INFO] [stdout] 502 | let mut pos_pKs: HashMap = POSITIVE_PKS.clone(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:503:17 [INFO] [stdout] | [INFO] [stdout] 503 | let mut neg_pKs: HashMap = NEGATIVE_PKS.clone(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `molecular_weight` [INFO] [stdout] --> src/cdr3/cdr3.rs:61:8 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn molecular_weight(sequence: &str) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `aromaticity` [INFO] [stdout] --> src/cdr3/cdr3.rs:103:8 [INFO] [stdout] | [INFO] [stdout] 103 | pub fn aromaticity(sequence: &str) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `create_cdr3_dict` [INFO] [stdout] --> src/cdr3/cdr3.rs:110:8 [INFO] [stdout] | [INFO] [stdout] 110 | pub fn create_cdr3_dict(cdr3_sequence: Vec) -> BTreeMap { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `aa_groups` [INFO] [stdout] --> src/cdr3/cdr3.rs:121:8 [INFO] [stdout] | [INFO] [stdout] 121 | pub fn aa_groups<'seq>(sequence: String) -> BTreeMap> { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `pK_table` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:500:8 [INFO] [stdout] | [INFO] [stdout] 500 | fn pK_table(&mut self) -> (HashMap, HashMap) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `select_charged` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:530:8 [INFO] [stdout] | [INFO] [stdout] 530 | fn select_charged(&mut self) -> HashMap { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `MW` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:24:9 [INFO] [stdout] | [INFO] [stdout] 24 | pub MW: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `mw` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `AV` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:25:9 [INFO] [stdout] | [INFO] [stdout] 25 | pub AV: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `av` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `IP` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:26:5 [INFO] [stdout] | [INFO] [stdout] 26 | IP: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `ip` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `P` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:282:13 [INFO] [stdout] | [INFO] [stdout] 282 | let mut P = ProteinAnalysis::new(sequence, quantity, None); [INFO] [stdout] | ^ help: convert the identifier to snake case: `p` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `H` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:65:13 [INFO] [stdout] | [INFO] [stdout] 65 | let H: HashMap> = [INFO] [stdout] | ^ help: convert the identifier to snake case: `h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `neg_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:246:5 [INFO] [stdout] | [INFO] [stdout] 246 | neg_pKs: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `neg_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `pos_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:248:5 [INFO] [stdout] | [INFO] [stdout] 248 | pos_pKs: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `pos_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `charge_at_pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:258:9 [INFO] [stdout] | [INFO] [stdout] 258 | pub charge_at_pH: Option, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `charge_at_p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:272:53 [INFO] [stdout] | [INFO] [stdout] 272 | pub fn new(sequence: &str, quantity: usize, mut pH: Option) -> Self { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `PA` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:273:17 [INFO] [stdout] | [INFO] [stdout] 273 | let mut PA = ProteinAnalysis { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `pa` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `charge_at_pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:435:12 [INFO] [stdout] | [INFO] [stdout] 435 | pub fn charge_at_pH(&mut self, mut pH: Option) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `charge_at_p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:435:40 [INFO] [stdout] | [INFO] [stdout] 435 | pub fn charge_at_pH(&mut self, mut pH: Option) -> f64 { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pK` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:442:22 [INFO] [stdout] | [INFO] [stdout] 442 | for (aa, pK) in &self.pos_pKs { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pK` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:453:22 [INFO] [stdout] | [INFO] [stdout] 453 | for (aa, pK) in &self.neg_pKs { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `pK_table` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:500:8 [INFO] [stdout] | [INFO] [stdout] 500 | fn pK_table(&mut self) -> (HashMap, HashMap) { [INFO] [stdout] | ^^^^^^^^ help: convert the identifier to snake case: `p_k_table` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pos_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:502:21 [INFO] [stdout] | [INFO] [stdout] 502 | let mut pos_pKs: HashMap = POSITIVE_PKS.clone(); [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `pos_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `neg_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:503:21 [INFO] [stdout] | [INFO] [stdout] 503 | let mut neg_pKs: HashMap = NEGATIVE_PKS.clone(); [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `neg_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pKnterminal` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:517:21 [INFO] [stdout] | [INFO] [stdout] 517 | let mut pKnterminal = PKNTERMINAL.clone(); [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `p_knterminal` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pKcterminal` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:518:21 [INFO] [stdout] | [INFO] [stdout] 518 | let mut pKcterminal = PKCTERMINAL.clone(); [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `p_kcterminal` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:555:13 [INFO] [stdout] | [INFO] [stdout] 555 | mut pH: Option, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 34 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 09s [INFO] running `Command { std: "docker" "inspect" "62e426befe2054d92e9f51832433489fa298f70c1dbbd2cfdb5dbf8d40aced93", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "62e426befe2054d92e9f51832433489fa298f70c1dbbd2cfdb5dbf8d40aced93", kill_on_drop: false }` [INFO] [stdout] 62e426befe2054d92e9f51832433489fa298f70c1dbbd2cfdb5dbf8d40aced93 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-30/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-30/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ac0d0aa6ec8ed129e241004a6179c99fa0d2616f50ba759c5b60bd26d0fafa02" "/opt/rustwide/cargo-home/bin/cargo" "+222c5724ecc922fe67815f428c19f82c129d9386" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 91e665225735e7401fb75d356af4880045749536c53dbba4ebaa643128fbc66e [INFO] running `Command { std: "docker" "start" "-a" "91e665225735e7401fb75d356af4880045749536c53dbba4ebaa643128fbc66e", kill_on_drop: false }` [INFO] [stderr] Compiling cdr3-parser v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `sequence` [INFO] [stdout] --> src/cdr3/cdr3.rs:121:24 [INFO] [stdout] | [INFO] [stdout] 121 | pub fn aa_groups<'seq>(sequence: String) -> BTreeMap> { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sequence` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `v` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:322:22 [INFO] [stdout] | [INFO] [stdout] 322 | for (aa, v) in &self.count_amino_acids() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_v` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `v` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:360:30 [INFO] [stdout] | [INFO] [stdout] 360 | .filter(|(k, v)| **k == 'Y' || **k == 'W' || **k == 'F') [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_v` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `k` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:361:24 [INFO] [stdout] | [INFO] [stdout] 361 | .map(|(k, v)| *v) [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `n` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:520:25 [INFO] [stdout] | [INFO] [stdout] 520 | if let Some(n) = pKnterminal.get_mut(&nterm) {} [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_n` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:272:49 [INFO] [stdout] | [INFO] [stdout] 272 | pub fn new(sequence: &str, quantity: usize, mut pH: Option) -> Self { [INFO] [stdout] | ----^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:502:17 [INFO] [stdout] | [INFO] [stdout] 502 | let mut pos_pKs: HashMap = POSITIVE_PKS.clone(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/cdr3/protein_analysis.rs:503:17 [INFO] [stdout] | [INFO] [stdout] 503 | let mut neg_pKs: HashMap = NEGATIVE_PKS.clone(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `molecular_weight` [INFO] [stdout] --> src/cdr3/cdr3.rs:61:8 [INFO] [stdout] | [INFO] [stdout] 61 | pub fn molecular_weight(sequence: &str) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `aromaticity` [INFO] [stdout] --> src/cdr3/cdr3.rs:103:8 [INFO] [stdout] | [INFO] [stdout] 103 | pub fn aromaticity(sequence: &str) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `create_cdr3_dict` [INFO] [stdout] --> src/cdr3/cdr3.rs:110:8 [INFO] [stdout] | [INFO] [stdout] 110 | pub fn create_cdr3_dict(cdr3_sequence: Vec) -> BTreeMap { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `aa_groups` [INFO] [stdout] --> src/cdr3/cdr3.rs:121:8 [INFO] [stdout] | [INFO] [stdout] 121 | pub fn aa_groups<'seq>(sequence: String) -> BTreeMap> { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `pK_table` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:500:8 [INFO] [stdout] | [INFO] [stdout] 500 | fn pK_table(&mut self) -> (HashMap, HashMap) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `select_charged` [INFO] [stdout] --> src/cdr3/protein_analysis.rs:530:8 [INFO] [stdout] | [INFO] [stdout] 530 | fn select_charged(&mut self) -> HashMap { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `MW` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:24:9 [INFO] [stdout] | [INFO] [stdout] 24 | pub MW: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `mw` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `AV` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:25:9 [INFO] [stdout] | [INFO] [stdout] 25 | pub AV: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `av` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `IP` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:26:5 [INFO] [stdout] | [INFO] [stdout] 26 | IP: f64, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `ip` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `P` should have a snake case name [INFO] [stdout] --> src/cdr3/cdr3.rs:282:13 [INFO] [stdout] | [INFO] [stdout] 282 | let mut P = ProteinAnalysis::new(sequence, quantity, None); [INFO] [stdout] | ^ help: convert the identifier to snake case: `p` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `H` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:65:13 [INFO] [stdout] | [INFO] [stdout] 65 | let H: HashMap> = [INFO] [stdout] | ^ help: convert the identifier to snake case: `h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `neg_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:246:5 [INFO] [stdout] | [INFO] [stdout] 246 | neg_pKs: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `neg_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `pos_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:248:5 [INFO] [stdout] | [INFO] [stdout] 248 | pos_pKs: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `pos_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `charge_at_pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:258:9 [INFO] [stdout] | [INFO] [stdout] 258 | pub charge_at_pH: Option, [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `charge_at_p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:272:53 [INFO] [stdout] | [INFO] [stdout] 272 | pub fn new(sequence: &str, quantity: usize, mut pH: Option) -> Self { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `PA` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:273:17 [INFO] [stdout] | [INFO] [stdout] 273 | let mut PA = ProteinAnalysis { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `pa` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `charge_at_pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:435:12 [INFO] [stdout] | [INFO] [stdout] 435 | pub fn charge_at_pH(&mut self, mut pH: Option) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `charge_at_p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:435:40 [INFO] [stdout] | [INFO] [stdout] 435 | pub fn charge_at_pH(&mut self, mut pH: Option) -> f64 { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pK` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:442:22 [INFO] [stdout] | [INFO] [stdout] 442 | for (aa, pK) in &self.pos_pKs { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pK` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:453:22 [INFO] [stdout] | [INFO] [stdout] 453 | for (aa, pK) in &self.neg_pKs { [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_k` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `pK_table` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:500:8 [INFO] [stdout] | [INFO] [stdout] 500 | fn pK_table(&mut self) -> (HashMap, HashMap) { [INFO] [stdout] | ^^^^^^^^ help: convert the identifier to snake case: `p_k_table` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pos_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:502:21 [INFO] [stdout] | [INFO] [stdout] 502 | let mut pos_pKs: HashMap = POSITIVE_PKS.clone(); [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `pos_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `neg_pKs` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:503:21 [INFO] [stdout] | [INFO] [stdout] 503 | let mut neg_pKs: HashMap = NEGATIVE_PKS.clone(); [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case: `neg_p_ks` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pKnterminal` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:517:21 [INFO] [stdout] | [INFO] [stdout] 517 | let mut pKnterminal = PKNTERMINAL.clone(); [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `p_knterminal` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pKcterminal` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:518:21 [INFO] [stdout] | [INFO] [stdout] 518 | let mut pKcterminal = PKCTERMINAL.clone(); [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `p_kcterminal` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `pH` should have a snake case name [INFO] [stdout] --> src/cdr3/protein_analysis.rs:555:13 [INFO] [stdout] | [INFO] [stdout] 555 | mut pH: Option, [INFO] [stdout] | ^^ help: convert the identifier to snake case: `p_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 34 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 9.96s [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/cdr3_parser-689e88357ca9e0a5) [INFO] running `Command { std: "docker" "inspect" "91e665225735e7401fb75d356af4880045749536c53dbba4ebaa643128fbc66e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "91e665225735e7401fb75d356af4880045749536c53dbba4ebaa643128fbc66e", kill_on_drop: false }` [INFO] [stdout] 91e665225735e7401fb75d356af4880045749536c53dbba4ebaa643128fbc66e