[INFO] fetching crate matchtigs 1.5.5... [INFO] building matchtigs-1.5.5 against master#c8e6a9e8b6251bbc8276cb78cabe1998deecbed7 for pr-97334-2 [INFO] extracting crate matchtigs 1.5.5 into /workspace/builds/worker-6-tc1/source [INFO] validating manifest of crates.io crate matchtigs 1.5.5 on toolchain c8e6a9e8b6251bbc8276cb78cabe1998deecbed7 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c8e6a9e8b6251bbc8276cb78cabe1998deecbed7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate matchtigs 1.5.5 [INFO] finished tweaking crates.io crate matchtigs 1.5.5 [INFO] tweaked toml for crates.io crate matchtigs 1.5.5 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] crate crates.io crate matchtigs 1.5.5 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c8e6a9e8b6251bbc8276cb78cabe1998deecbed7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded traitgraph-algo v5.3.0 [INFO] [stderr] Downloaded bitvector v0.1.5 [INFO] [stderr] Downloaded ref-cast-impl v1.0.13 [INFO] [stderr] Downloaded disjoint-sets v0.4.2 [INFO] [stderr] Downloaded compact-genome v1.2.1 [INFO] [stderr] Downloaded ref-cast v1.0.13 [INFO] [stderr] Downloaded atomic-counter v1.0.1 [INFO] [stderr] Downloaded bio-types v0.13.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded bigraph v2.1.1 [INFO] [stderr] Downloaded traitgraph v2.2.0 [INFO] [stderr] Downloaded genome-graph v5.1.1 [INFO] [stderr] Downloaded memory-stats v1.0.0 [INFO] [stderr] Downloaded traitsequence v1.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7c93e6f9a94679f34221d1005849d4c83862f85b14a264fa0883942f4d043a66" "/opt/rustwide/cargo-home/bin/cargo" "+c8e6a9e8b6251bbc8276cb78cabe1998deecbed7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 82477019d4824cb10137861333e74448e71159cdfe6afefe5c9393c598893dca [INFO] running `Command { std: "docker" "start" "-a" "82477019d4824cb10137861333e74448e71159cdfe6afefe5c9393c598893dca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "82477019d4824cb10137861333e74448e71159cdfe6afefe5c9393c598893dca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "82477019d4824cb10137861333e74448e71159cdfe6afefe5c9393c598893dca", kill_on_drop: false }` [INFO] [stdout] 82477019d4824cb10137861333e74448e71159cdfe6afefe5c9393c598893dca [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7c93e6f9a94679f34221d1005849d4c83862f85b14a264fa0883942f4d043a66" "/opt/rustwide/cargo-home/bin/cargo" "+c8e6a9e8b6251bbc8276cb78cabe1998deecbed7" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 72b229bf7f726f56f5c592f450b50a1153c44f7b0d5d3699dc17f8da1101faf0 [INFO] running `Command { std: "docker" "start" "-a" "72b229bf7f726f56f5c592f450b50a1153c44f7b0d5d3699dc17f8da1101faf0", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.47 [INFO] [stderr] Compiling quote v1.0.21 [INFO] [stderr] Compiling unicode-ident v1.0.5 [INFO] [stderr] Compiling syn v1.0.105 [INFO] [stderr] Compiling libc v0.2.138 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling libm v0.2.6 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling serde_derive v1.0.149 [INFO] [stderr] Compiling once_cell v1.16.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling serde v1.0.149 [INFO] [stderr] Compiling indexmap v1.9.2 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling crossbeam-utils v0.8.14 [INFO] [stderr] Compiling rustversion v1.0.9 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Compiling typenum v1.16.0 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling matrixmultiply v0.3.2 [INFO] [stderr] Compiling memoffset v0.7.1 [INFO] [stderr] Compiling traitsequence v1.1.0 [INFO] [stderr] Compiling ahash v0.7.6 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.37 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling io-lifetimes v1.0.3 [INFO] [stderr] Compiling paste v1.0.9 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Compiling cc v1.0.77 [INFO] [stderr] Compiling crossbeam-epoch v0.9.13 [INFO] [stderr] Compiling either v1.8.0 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling unicode-segmentation v1.10.0 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling rustix v0.36.5 [INFO] [stderr] Compiling ref-cast v1.0.13 [INFO] [stderr] Compiling tap v1.0.1 [INFO] [stderr] Compiling gimli v0.26.2 [INFO] [stderr] Compiling anyhow v1.0.66 [INFO] [stderr] Compiling bitvector v0.1.5 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling wyz v0.5.1 [INFO] [stderr] Compiling regex v1.7.0 [INFO] [stderr] Compiling num-complex v0.4.2 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling getrandom v0.2.8 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Compiling miniz_oxide v0.5.4 [INFO] [stderr] Compiling object v0.29.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling rustc-demangle v0.1.21 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling crossbeam-queue v0.3.8 [INFO] [stderr] Compiling linux-raw-sys v0.1.3 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling backtrace v0.3.66 [INFO] [stderr] Compiling funty v2.0.0 [INFO] [stderr] Compiling ryu v1.0.11 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling bitvec v1.0.1 [INFO] [stderr] Compiling petgraph v0.6.2 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling itoa v1.0.4 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling os_str_bytes v6.4.1 [INFO] [stderr] Compiling addr2line v0.17.0 [INFO] [stderr] Compiling bytecount v0.6.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.23.0 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling clap_lex v0.3.0 [INFO] [stderr] Compiling time v0.3.17 [INFO] [stderr] Compiling crossbeam-deque v0.8.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.6 [INFO] [stderr] Compiling miniz_oxide v0.6.2 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling disjoint-sets v0.4.2 [INFO] [stderr] Compiling memory-stats v1.0.0 [INFO] [stderr] Compiling is-terminal v0.4.1 [INFO] [stderr] Compiling atomic-counter v1.0.1 [INFO] [stderr] Compiling permutation v0.4.1 [INFO] [stderr] Compiling crossbeam v0.8.2 [INFO] [stderr] Compiling flate2 v1.0.25 [INFO] [stderr] Compiling simplelog v0.12.0 [INFO] [stderr] Compiling traitgraph v2.2.0 [INFO] [stderr] Compiling traitgraph-algo v5.3.0 [INFO] [stderr] Compiling bigraph v2.1.1 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.37 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling ref-cast-impl v1.0.13 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling clap_derive v4.0.21 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling compact-genome v1.2.1 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling bio-types v0.13.0 [INFO] [stderr] Compiling clap v4.0.29 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling bio v0.41.0 [INFO] [stderr] Compiling genome-graph v5.1.1 [INFO] [stderr] Compiling matchtigs v1.5.5 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 35.86s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nalgebra v0.27.1 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] running `Command { std: "docker" "inspect" "72b229bf7f726f56f5c592f450b50a1153c44f7b0d5d3699dc17f8da1101faf0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "72b229bf7f726f56f5c592f450b50a1153c44f7b0d5d3699dc17f8da1101faf0", kill_on_drop: false }` [INFO] [stdout] 72b229bf7f726f56f5c592f450b50a1153c44f7b0d5d3699dc17f8da1101faf0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7c93e6f9a94679f34221d1005849d4c83862f85b14a264fa0883942f4d043a66" "/opt/rustwide/cargo-home/bin/cargo" "+c8e6a9e8b6251bbc8276cb78cabe1998deecbed7" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 67f934f0baae3b74af250ba17a76b3ef290103e4643d2bc74c9b89877418fc4b [INFO] running `Command { std: "docker" "start" "-a" "67f934f0baae3b74af250ba17a76b3ef290103e4643d2bc74c9b89877418fc4b", kill_on_drop: false }` [INFO] [stderr] Compiling matchtigs v1.5.5 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 5.05s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nalgebra v0.27.1 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "67f934f0baae3b74af250ba17a76b3ef290103e4643d2bc74c9b89877418fc4b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "67f934f0baae3b74af250ba17a76b3ef290103e4643d2bc74c9b89877418fc4b", kill_on_drop: false }` [INFO] [stdout] 67f934f0baae3b74af250ba17a76b3ef290103e4643d2bc74c9b89877418fc4b