[INFO] cloning repository https://github.com/genomehubs/goat-cli
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/genomehubs/goat-cli" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomehubs%2Fgoat-cli", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomehubs%2Fgoat-cli'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b971e2c9de59869218c6869e832523bf8a6c3128
[INFO] checking genomehubs/goat-cli against master#4c5f6e6277b89e47d73a192078697f7a5f3dc0ac for pr-97086
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomehubs%2Fgoat-cli" "/workspace/builds/worker-100/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-100/source'...
[INFO] [stderr] done.
[INFO] [stderr] Updating files:  79% (166/209)
Updating files:  80% (168/209)
Updating files:  81% (170/209)
Updating files:  82% (172/209)
Updating files:  83% (174/209)
Updating files:  84% (176/209)
Updating files:  85% (178/209)
Updating files:  86% (180/209)
Updating files:  87% (182/209)
Updating files:  88% (184/209)
Updating files:  89% (187/209)
Updating files:  90% (189/209)
Updating files:  91% (191/209)
Updating files:  92% (193/209)
Updating files:  93% (195/209)
Updating files:  94% (197/209)
Updating files:  95% (199/209)
Updating files:  96% (201/209)
Updating files:  97% (203/209)
Updating files:  98% (205/209)
Updating files:  99% (207/209)
Updating files: 100% (209/209)
Updating files: 100% (209/209), done.
[INFO] validating manifest of git repo https://github.com/genomehubs/goat-cli on toolchain 4c5f6e6277b89e47d73a192078697f7a5f3dc0ac
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c5f6e6277b89e47d73a192078697f7a5f3dc0ac" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/genomehubs/goat-cli
[INFO] finished tweaking git repo https://github.com/genomehubs/goat-cli
[INFO] tweaked toml for git repo https://github.com/genomehubs/goat-cli written to /workspace/builds/worker-100/source/Cargo.toml
[INFO] crate git repo https://github.com/genomehubs/goat-cli already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c5f6e6277b89e47d73a192078697f7a5f3dc0ac" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded again v0.1.2
[INFO] [stderr]   Downloaded papergrid v0.3.0
[INFO] [stderr]   Downloaded tabled_derive v0.3.0
[INFO] [stderr]   Downloaded clap v3.1.1
[INFO] [stderr]   Downloaded tabled v0.6.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c5f6e6277b89e47d73a192078697f7a5f3dc0ac" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d3c7d7393fac976255d0482f326a75266a47fe9b4d805a2ee322b7b7940aea90
[INFO] running `Command { std: "docker" "start" "-a" "d3c7d7393fac976255d0482f326a75266a47fe9b4d805a2ee322b7b7940aea90", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d3c7d7393fac976255d0482f326a75266a47fe9b4d805a2ee322b7b7940aea90", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d3c7d7393fac976255d0482f326a75266a47fe9b4d805a2ee322b7b7940aea90", kill_on_drop: false }`
[INFO] [stdout] d3c7d7393fac976255d0482f326a75266a47fe9b4d805a2ee322b7b7940aea90
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-100/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c5f6e6277b89e47d73a192078697f7a5f3dc0ac" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] eb4f42fe67570c2afa78c81189e388bb7116c30dd7787dd90d36306a580afd8a
[INFO] running `Command { std: "docker" "start" "-a" "eb4f42fe67570c2afa78c81189e388bb7116c30dd7787dd90d36306a580afd8a", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.105
[INFO] [stderr]    Compiling proc-macro2 v1.0.30
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.80
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling futures-core v0.3.17
[INFO] [stderr]     Checking pin-project-lite v0.2.7
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]     Checking once_cell v1.8.0
[INFO] [stderr]     Checking futures-io v0.3.17
[INFO] [stderr]     Checking slab v0.4.5
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]     Checking smallvec v1.7.0
[INFO] [stderr]     Checking futures-sink v0.3.17
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling futures-task v0.3.17
[INFO] [stderr]    Compiling proc-macro-nested v0.1.7
[INFO] [stderr]    Compiling futures-channel v0.3.17
[INFO] [stderr]     Checking pin-utils v0.1.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling cc v1.0.71
[INFO] [stderr]    Compiling pkg-config v0.3.21
[INFO] [stderr]     Checking bytes v1.1.0
[INFO] [stderr]     Checking itoa v0.4.8
[INFO] [stderr]     Checking cache-padded v1.1.1
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]     Checking waker-fn v1.1.0
[INFO] [stderr]    Compiling openssl v0.10.36
[INFO] [stderr]     Checking parking v2.0.0
[INFO] [stderr]     Checking foreign-types-shared v0.1.1
[INFO] [stderr]     Checking fnv v1.0.7
[INFO] [stderr]     Checking bitflags v1.3.2
[INFO] [stderr]     Checking fastrand v1.5.0
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking event-listener v2.5.1
[INFO] [stderr]     Checking matches v0.1.9
[INFO] [stderr]    Compiling httparse v1.5.1
[INFO] [stderr]    Compiling native-tls v0.2.8
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]     Checking tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking try-lock v0.2.3
[INFO] [stderr]     Checking async-task v4.0.3
[INFO] [stderr]     Checking openssl-probe v0.1.4
[INFO] [stderr]     Checking ppv-lite86 v0.2.14
[INFO] [stderr]     Checking atomic-waker v1.0.0
[INFO] [stderr]     Checking unicode-bidi v0.3.7
[INFO] [stderr]    Compiling encoding_rs v0.8.29
[INFO] [stderr]     Checking httpdate v1.0.1
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]     Checking tower-service v0.3.1
[INFO] [stderr]    Compiling serde_json v1.0.68
[INFO] [stderr]     Checking unicode-width v0.1.9
[INFO] [stderr]    Compiling anyhow v1.0.44
[INFO] [stderr]     Checking regex-syntax v0.6.25
[INFO] [stderr]     Checking base64 v0.13.0
[INFO] [stderr]     Checking textwrap v0.14.2
[INFO] [stderr]     Checking ipnet v2.3.1
[INFO] [stderr]     Checking termcolor v1.1.2
[INFO] [stderr]     Checking number_prefix v0.4.0
[INFO] [stderr]     Checking mime v0.3.16
[INFO] [stderr]     Checking strsim v0.10.0
[INFO] [stderr]     Checking papergrid v0.3.0
[INFO] [stderr]    Compiling value-bag v1.0.0-alpha.8
[INFO] [stderr]     Checking instant v0.1.12
[INFO] [stderr]     Checking foreign-types v0.3.2
[INFO] [stderr]     Checking tinyvec v1.5.0
[INFO] [stderr]     Checking concurrent-queue v1.2.2
[INFO] [stderr]     Checking async-mutex v1.4.0
[INFO] [stderr]     Checking async-lock v2.4.0
[INFO] [stderr]     Checking lock_api v0.4.5
[INFO] [stderr]     Checking tracing-core v0.1.21
[INFO] [stderr]     Checking form_urlencoded v1.0.1
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking os_str_bytes v6.0.0
[INFO] [stderr]     Checking http v0.2.5
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking signal-hook-registry v1.4.0
[INFO] [stderr]     Checking socket2 v0.4.2
[INFO] [stderr]     Checking terminal_size v0.1.17
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]    Compiling quote v1.0.10
[INFO] [stderr]     Checking unicode-normalization v0.1.19
[INFO] [stderr]     Checking tracing v0.1.29
[INFO] [stderr]     Checking futures-lite v1.12.0
[INFO] [stderr]     Checking async-channel v1.6.1
[INFO] [stderr]     Checking console v0.15.0
[INFO] [stderr]     Checking regex v1.5.4
[INFO] [stderr]    Compiling futures-macro v0.3.17
[INFO] [stderr]    Compiling futures-util v0.3.17
[INFO] [stderr]    Compiling openssl-sys v0.9.67
[INFO] [stderr]    Compiling tokio v1.12.0
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]     Checking parking_lot v0.11.2
[INFO] [stderr]     Checking idna v0.2.3
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking async-executor v1.4.1
[INFO] [stderr]     Checking blocking v1.1.0
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]     Checking indicatif v0.16.2
[INFO] [stderr]     Checking url v2.2.2
[INFO] [stderr]     Checking clap v3.1.1
[INFO] [stderr]     Checking http-body v0.4.4
[INFO] [stderr]     Checking serde_urlencoded v0.7.0
[INFO] [stderr]    Compiling ctor v0.1.21
[INFO] [stderr]    Compiling tokio-macros v1.5.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.30
[INFO] [stderr]    Compiling tabled_derive v0.3.0
[INFO] [stderr]     Checking tabled v0.6.0
[INFO] [stderr]     Checking mio v0.7.14
[INFO] [stderr]     Checking want v0.3.0
[INFO] [stderr]     Checking polling v2.2.0
[INFO] [stderr]     Checking kv-log-macro v1.0.7
[INFO] [stderr]     Checking async-io v1.6.0
[INFO] [stderr]     Checking thiserror v1.0.30
[INFO] [stderr]     Checking async-global-executor v2.0.2
[INFO] [stderr]     Checking async-std v1.10.0
[INFO] [stderr]     Checking futures-executor v0.3.17
[INFO] [stderr]     Checking futures v0.3.17
[INFO] [stderr]     Checking wasm-timer v0.2.5
[INFO] [stderr]     Checking again v0.1.2
[INFO] [stderr]     Checking tokio-util v0.6.8
[INFO] [stderr]     Checking tokio-native-tls v0.3.0
[INFO] [stderr]     Checking h2 v0.3.7
[INFO] [stderr]     Checking hyper v0.14.14
[INFO] [stderr]     Checking hyper-tls v0.5.0
[INFO] [stderr]     Checking reqwest v0.11.6
[INFO] [stderr]     Checking goat-cli v0.1.55 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated associated function `lookup::lookup::Collector::return_taxid_vec`: Currently deprecated. Might be used in future to suggest spelling corrections in search.
[INFO] [stdout]    --> src/lookup/mod.rs:145:38
[INFO] [stdout]     |
[INFO] [stdout] 145 |                     let taxid_op = e.return_taxid_vec()?;
[INFO] [stdout]     |                                      ^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `lookup::lookup::Collector::return_taxid_vec`: Currently deprecated. Might be used in future to suggest spelling corrections in search.
[INFO] [stdout]    --> src/lookup/mod.rs:145:38
[INFO] [stdout]     |
[INFO] [stdout] 145 |                     let taxid_op = e.return_taxid_vec()?;
[INFO] [stdout]     |                                      ^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 59.47s
[INFO] running `Command { std: "docker" "inspect" "eb4f42fe67570c2afa78c81189e388bb7116c30dd7787dd90d36306a580afd8a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "eb4f42fe67570c2afa78c81189e388bb7116c30dd7787dd90d36306a580afd8a", kill_on_drop: false }`
[INFO] [stdout] eb4f42fe67570c2afa78c81189e388bb7116c30dd7787dd90d36306a580afd8a