[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 7b70a70ee0d7c4e8eb11f2e3220c8173b0ac01c9
[INFO] checking IMTMarburg/mbf_bam against master#297a8018b525c28ef10ee6a91d61954839b508b9 for pr-95565
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 297a8018b525c28ef10ee6a91d61954839b508b9
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+297a8018b525c28ef10ee6a91d61954839b508b9" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+297a8018b525c28ef10ee6a91d61954839b508b9" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded triple_accel v0.3.4
[INFO] [stderr]   Downloaded enum-map-derive v0.4.6
[INFO] [stderr]   Downloaded enum-map v0.6.4
[INFO] [stderr]   Downloaded ndarray v0.14.0
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded statrs v0.14.0
[INFO] [stderr]   Downloaded bio-types v0.12.0
[INFO] [stderr]   Downloaded lzma-sys v0.1.17
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.14.1
[INFO] [stderr]   Downloaded bio v0.37.0
[INFO] [stderr]   Downloaded rust-htslib v0.38.2
[INFO] [stderr]   Downloaded openssl-src v111.12.0+1.1.1h
[INFO] [stderr]   Downloaded pyo3-build-config v0.14.1
[INFO] [stderr]   Downloaded pyo3-macros v0.14.1
[INFO] [stderr]   Downloaded fs-utils v1.1.0
[INFO] [stderr]   Downloaded pyo3 v0.14.1
[INFO] [stderr]   Downloaded hts-sys v2.0.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+297a8018b525c28ef10ee6a91d61954839b508b9" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 95e422a0ffc13cf7c4a73080df347795d12d1f90f5d0b1ca0124abf4b35e7dc2
[INFO] running `Command { std: "docker" "start" "-a" "95e422a0ffc13cf7c4a73080df347795d12d1f90f5d0b1ca0124abf4b35e7dc2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "95e422a0ffc13cf7c4a73080df347795d12d1f90f5d0b1ca0124abf4b35e7dc2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "95e422a0ffc13cf7c4a73080df347795d12d1f90f5d0b1ca0124abf4b35e7dc2", kill_on_drop: false }`
[INFO] [stdout] 95e422a0ffc13cf7c4a73080df347795d12d1f90f5d0b1ca0124abf4b35e7dc2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eaef2f80f755933c374d2ae5edccceec0c1312ceb8a4e0b6404e8ab76561e1e5" "/opt/rustwide/cargo-home/bin/cargo" "+297a8018b525c28ef10ee6a91d61954839b508b9" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8d959904b75c2fbc864fa5fba7df596bb2ac06a192ce1d1b7486eb2447197f42
[INFO] running `Command { std: "docker" "start" "-a" "8d959904b75c2fbc864fa5fba7df596bb2ac06a192ce1d1b7486eb2447197f42", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling libc v0.2.79
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.5
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling rayon-core v1.9.1
[INFO] [stderr]    Compiling scopeguard v1.1.0
[INFO] [stderr]    Compiling either v1.5.2
[INFO] [stderr]    Compiling proc-macro2 v1.0.27
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling pkg-config v0.3.14
[INFO] [stderr]    Compiling syn v1.0.73
[INFO] [stderr]    Compiling libm v0.2.1
[INFO] [stderr]    Compiling proc-macro2 v0.4.27
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling syn v0.15.30
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]    Compiling serde v1.0.90
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling pyo3-build-config v0.14.1
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling once_cell v1.8.0
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling typenum v1.13.0
[INFO] [stderr]    Compiling quick-error v1.2.2
[INFO] [stderr]    Compiling byteorder v1.3.1
[INFO] [stderr]    Compiling proc-macro-hack v0.5.18
[INFO] [stderr]    Compiling unicode-segmentation v1.8.0
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling paste v1.0.5
[INFO] [stderr]     Checking smallvec v0.6.9
[INFO] [stderr]     Checking regex-syntax v0.6.12
[INFO] [stderr]    Compiling autocfg v0.1.2
[INFO] [stderr]    Compiling failure_derive v0.1.5
[INFO] [stderr]    Compiling ndarray v0.14.0
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]     Checking regex-automata v0.1.10
[INFO] [stderr]     Checking smallvec v1.4.2
[INFO] [stderr]    Compiling anyhow v1.0.42
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]     Checking adler32 v1.0.4
[INFO] [stderr]     Checking array-macro v1.0.5
[INFO] [stderr]     Checking bit-vec v0.5.1
[INFO] [stderr]     Checking itoa v0.4.3
[INFO] [stderr]    Compiling bio v0.37.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]     Checking rustc-demangle v0.1.13
[INFO] [stderr]     Checking triple_accel v0.3.4
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking strum v0.20.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking fnv v1.0.6
[INFO] [stderr]     Checking bytecount v0.6.2
[INFO] [stderr]     Checking thread_local v0.3.6
[INFO] [stderr]     Checking matrixmultiply v0.3.1
[INFO] [stderr]     Checking matrixmultiply v0.2.4
[INFO] [stderr]     Checking itertools v0.9.0
[INFO] [stderr]     Checking instant v0.1.7
[INFO] [stderr]    Compiling fs-utils v1.1.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking lock_api v0.4.1
[INFO] [stderr]     Checking bit-set v0.5.1
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]     Checking unicode-normalization v0.1.8
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]     Checking miniz_oxide v0.3.5
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling backtrace v0.3.15
[INFO] [stderr]    Compiling memoffset v0.6.4
[INFO] [stderr]    Compiling rayon v1.5.1
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling num-rational v0.3.2
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling crossbeam-channel v0.5.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking aho-corasick v0.7.6
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]    Compiling quote v0.6.12
[INFO] [stderr]     Checking crossbeam-deque v0.8.0
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]     Checking getrandom v0.2.3
[INFO] [stderr]     Checking idna v0.2.0
[INFO] [stderr]     Checking num_cpus v1.10.0
[INFO] [stderr]     Checking parking_lot_core v0.8.0
[INFO] [stderr]     Checking flate2 v1.0.13
[INFO] [stderr]    Compiling pyo3 v0.14.1
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking parking_lot v0.11.0
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking petgraph v0.5.1
[INFO] [stderr]     Checking regex v1.3.1
[INFO] [stderr]     Checking url v2.1.1
[INFO] [stderr]     Checking rand v0.8.4
[INFO] [stderr]     Checking num-complex v0.3.1
[INFO] [stderr]     Checking approx v0.4.0
[INFO] [stderr]     Checking ordered-float v1.0.2
[INFO] [stderr]     Checking approx v0.3.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]     Checking simba v0.4.0
[INFO] [stderr]     Checking rand_distr v0.4.1
[INFO] [stderr]    Compiling synstructure v0.10.1
[INFO] [stderr]    Compiling cc v1.0.35
[INFO] [stderr]    Compiling openssl-src v111.12.0+1.1.1h
[INFO] [stderr]    Compiling serde_derive v1.0.90
[INFO] [stderr]    Compiling openssl-sys v0.9.65
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]    Compiling backtrace-sys v0.1.28
[INFO] [stderr]    Compiling hts-sys v2.0.1
[INFO] [stderr]    Compiling pyo3-macros-backend v0.14.1
[INFO] [stderr]     Checking failure v0.1.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.21
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling enum-map-derive v0.4.6
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling pyo3-macros v0.14.1
[INFO] [stderr] error: could not compile `simba`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name simba --edition=2018 /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/simba-0.4.0/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="std"' -C metadata=2885b3a53a204503 -C extra-filename=-2885b3a53a204503 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern approx=/opt/rustwide/target/debug/deps/libapprox-d14dcc3ebbea7119.rmeta --extern num_complex=/opt/rustwide/target/debug/deps/libnum_complex-cf314f0955d704e5.rmeta --extern num_traits=/opt/rustwide/target/debug/deps/libnum_traits-05d710a73acd1618.rmeta --extern paste=/opt/rustwide/target/debug/deps/libpaste-1d007800db85bb25.so --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `serde_derive`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name serde_derive /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/serde_derive-1.0.90/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type proc-macro --emit=dep-info,link -C prefer-dynamic -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' -C metadata=d18383ef44a940c1 -C extra-filename=-d18383ef44a940c1 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-d586d2e93f3ede76.rlib --extern quote=/opt/rustwide/target/debug/deps/libquote-6689093bbb6acfa5.rlib --extern syn=/opt/rustwide/target/debug/deps/libsyn-ca24078a33d271fc.rlib --extern proc_macro --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "8d959904b75c2fbc864fa5fba7df596bb2ac06a192ce1d1b7486eb2447197f42", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8d959904b75c2fbc864fa5fba7df596bb2ac06a192ce1d1b7486eb2447197f42", kill_on_drop: false }`
[INFO] [stdout] 8d959904b75c2fbc864fa5fba7df596bb2ac06a192ce1d1b7486eb2447197f42