[INFO] cloning repository https://github.com/10XGenomics/bamtofastq [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/bamtofastq" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 43aebe790baee0fae8f969a0fce0f1a4c5269bc6 [INFO] building 10XGenomics/bamtofastq against try#8aaecdf5df68a6fbc126704e44d399ba2fe66bf2 for pr-94962 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fbamtofastq" "/workspace/builds/worker-58/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-58/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/10XGenomics/bamtofastq on toolchain 8aaecdf5df68a6fbc126704e44d399ba2fe66bf2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8aaecdf5df68a6fbc126704e44d399ba2fe66bf2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-58/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/10XGenomics/bamtofastq [INFO] finished tweaking git repo https://github.com/10XGenomics/bamtofastq [INFO] tweaked toml for git repo https://github.com/10XGenomics/bamtofastq written to /workspace/builds/worker-58/source/Cargo.toml [INFO] crate git repo https://github.com/10XGenomics/bamtofastq already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8aaecdf5df68a6fbc126704e44d399ba2fe66bf2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1ede1414886370302e694df474b9877c02906499f04c196936ce0973d30c5eaa" "/opt/rustwide/cargo-home/bin/cargo" "+8aaecdf5df68a6fbc126704e44d399ba2fe66bf2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cf42bc36b9ad06a7e12ee87db99181cc038371d66174ed936cf01c74d8df3ec4 [INFO] running `Command { std: "docker" "start" "-a" "cf42bc36b9ad06a7e12ee87db99181cc038371d66174ed936cf01c74d8df3ec4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cf42bc36b9ad06a7e12ee87db99181cc038371d66174ed936cf01c74d8df3ec4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cf42bc36b9ad06a7e12ee87db99181cc038371d66174ed936cf01c74d8df3ec4", kill_on_drop: false }` [INFO] [stdout] cf42bc36b9ad06a7e12ee87db99181cc038371d66174ed936cf01c74d8df3ec4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1ede1414886370302e694df474b9877c02906499f04c196936ce0973d30c5eaa" "/opt/rustwide/cargo-home/bin/cargo" "+8aaecdf5df68a6fbc126704e44d399ba2fe66bf2" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b02050388d22cb5e274b741b5ef9a4dddfafc2132abcc9085a8bf701ae31e4b3 [INFO] running `Command { std: "docker" "start" "-a" "b02050388d22cb5e274b741b5ef9a4dddfafc2132abcc9085a8bf701ae31e4b3", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.117 [INFO] [stderr] Compiling proc-macro2 v1.0.36 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.86 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling pkg-config v0.3.24 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling serde_derive v1.0.136 [INFO] [stderr] Compiling serde v1.0.136 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling tinyvec_macros v0.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling rustversion v1.0.6 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.6 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling gimli v0.26.1 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling matches v0.1.9 [INFO] [stderr] Compiling crc32fast v1.3.1 [INFO] [stderr] Compiling anyhow v1.0.56 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling unicode-bidi v0.3.7 [INFO] [stderr] Compiling rustc-demangle v0.1.21 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling min-max-heap v1.3.0 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling ryu v1.0.9 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling fastrand v1.7.0 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling tinyvec v1.5.1 [INFO] [stderr] Compiling form_urlencoded v1.0.1 [INFO] [stderr] Compiling itertools v0.10.3 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling addr2line v0.17.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.2 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling object v0.27.1 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.15 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Compiling unicode-normalization v0.1.19 [INFO] [stderr] Compiling tempfile v3.3.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling regex v1.5.5 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling idna v0.2.3 [INFO] [stderr] Compiling cmake v0.1.48 [INFO] [stderr] Compiling url v2.2.2 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling libdeflate-sys v0.5.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lz4-sys v1.9.2 [INFO] [stderr] Compiling backtrace v0.3.64 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling lz4 v1.23.2 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling serde_bytes v0.11.5 [INFO] [stderr] Compiling docopt v1.1.1 [INFO] [stderr] Compiling shardio v0.8.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling rust-htslib v0.38.2 [INFO] [stderr] Compiling bamtofastq v1.4.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [optimized + debuginfo] target(s) in 1m 42s [INFO] running `Command { std: "docker" "inspect" "b02050388d22cb5e274b741b5ef9a4dddfafc2132abcc9085a8bf701ae31e4b3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b02050388d22cb5e274b741b5ef9a4dddfafc2132abcc9085a8bf701ae31e4b3", kill_on_drop: false }` [INFO] [stdout] b02050388d22cb5e274b741b5ef9a4dddfafc2132abcc9085a8bf701ae31e4b3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-58/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1ede1414886370302e694df474b9877c02906499f04c196936ce0973d30c5eaa" "/opt/rustwide/cargo-home/bin/cargo" "+8aaecdf5df68a6fbc126704e44d399ba2fe66bf2" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] aea1da39749bb30c591e055e333f489ba7c417fa479599940ac635821547da41 [INFO] running `Command { std: "docker" "start" "-a" "aea1da39749bb30c591e055e333f489ba7c417fa479599940ac635821547da41", kill_on_drop: false }` [INFO] [stderr] Compiling bamtofastq v1.4.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [optimized + debuginfo] target(s) in 20.96s [INFO] [stderr] Executable unittests src/main.rs (/opt/rustwide/target/debug/deps/bamtofastq-0799ac51d49ca5bd) [INFO] running `Command { std: "docker" "inspect" "aea1da39749bb30c591e055e333f489ba7c417fa479599940ac635821547da41", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "aea1da39749bb30c591e055e333f489ba7c417fa479599940ac635821547da41", kill_on_drop: false }` [INFO] [stdout] aea1da39749bb30c591e055e333f489ba7c417fa479599940ac635821547da41