[INFO] fetching crate rust-bio-tools 0.31.0...
[INFO] checking rust-bio-tools-0.31.0 against master#936f2600b6c903b04387f74ed5cbce88bb06d243 for pr-91141
[INFO] extracting crate rust-bio-tools 0.31.0 into /workspace/builds/worker-61/source
[INFO] validating manifest of crates.io crate rust-bio-tools 0.31.0 on toolchain 936f2600b6c903b04387f74ed5cbce88bb06d243
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] removed /workspace/builds/worker-61/source/.cargo/config
[INFO] started tweaking crates.io crate rust-bio-tools 0.31.0
[INFO] finished tweaking crates.io crate rust-bio-tools 0.31.0
[INFO] tweaked toml for crates.io crate rust-bio-tools 0.31.0 written to /workspace/builds/worker-61/source/Cargo.toml
[INFO] crate crates.io crate rust-bio-tools 0.31.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-61/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-61/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7ba3fe3273ed46ccafd18535d133487265eaee77dd977db45b7d43c65d597e19
[INFO] running `Command { std: "docker" "start" "-a" "7ba3fe3273ed46ccafd18535d133487265eaee77dd977db45b7d43c65d597e19", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7ba3fe3273ed46ccafd18535d133487265eaee77dd977db45b7d43c65d597e19", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7ba3fe3273ed46ccafd18535d133487265eaee77dd977db45b7d43c65d597e19", kill_on_drop: false }`
[INFO] [stdout] 7ba3fe3273ed46ccafd18535d133487265eaee77dd977db45b7d43c65d597e19
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-61/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-61/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0793497df13c8a22fd9346d8fa4c6afc31d2609eaf96b41e5f18b5546ab2943c
[INFO] running `Command { std: "docker" "start" "-a" "0793497df13c8a22fd9346d8fa4c6afc31d2609eaf96b41e5f18b5546ab2943c", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling libc v0.2.107
[INFO] [stderr]    Compiling syn v1.0.81
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]    Compiling pkg-config v0.3.22
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking itoa v0.4.8
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking rand_core v0.4.2
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling autocfg v0.1.7
[INFO] [stderr]     Checking once_cell v1.8.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling radium v0.5.3
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling ppv-lite86 v0.2.15
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling siphasher v0.3.7
[INFO] [stderr]    Compiling wyz v0.2.0
[INFO] [stderr]    Compiling unicode-segmentation v1.8.0
[INFO] [stderr]    Compiling funty v1.1.0
[INFO] [stderr]    Compiling tap v1.0.1
[INFO] [stderr]    Compiling unicode-width v0.1.9
[INFO] [stderr]     Checking regex-automata v0.1.10
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]    Compiling bindgen v0.59.1
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.58.1
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling yaml-rust v0.3.5
[INFO] [stderr]    Compiling serde_json v1.0.70
[INFO] [stderr]    Compiling ucd-trie v0.1.3
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.5
[INFO] [stderr]    Compiling openssl v0.10.38
[INFO] [stderr]     Checking foreign-types-shared v0.1.1
[INFO] [stderr]     Checking gimli v0.24.0
[INFO] [stderr]     Checking object v0.24.0
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking unic-char-range v0.9.0
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling native-tls v0.2.8
[INFO] [stderr]    Compiling maplit v1.0.2
[INFO] [stderr]     Checking rustc-demangle v0.1.21
[INFO] [stderr]     Checking unic-common v0.9.0
[INFO] [stderr]     Checking try-lock v0.2.3
[INFO] [stderr]     Checking same-file v1.0.6
[INFO] [stderr]    Compiling rayon-core v1.9.1
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling ndarray v0.13.1
[INFO] [stderr]     Checking smallvec v1.7.0
[INFO] [stderr]     Checking openssl-probe v0.1.4
[INFO] [stderr]    Compiling encoding_rs v0.8.29
[INFO] [stderr]     Checking dtoa v0.4.8
[INFO] [stderr]     Checking deunicode v0.4.3
[INFO] [stderr]     Checking void v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling bio v0.32.0
[INFO] [stderr]     Checking array-macro v1.0.5
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]    Compiling anyhow v1.0.45
[INFO] [stderr]     Checking c_vec v1.0.12
[INFO] [stderr]     Checking strum v0.18.0
[INFO] [stderr]     Checking triple_accel v0.3.4
[INFO] [stderr]     Checking humansize v1.1.1
[INFO] [stderr]     Checking remove_dir_all v0.5.3
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking bytecount v0.6.2
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking lz-str v0.1.0
[INFO] [stderr]     Checking rustc-serialize v0.3.24
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling uncased v0.9.6
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling libloading v0.7.2
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling nom v6.2.1
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling memoffset v0.6.4
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr] error: could not compile `pkg-config`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name pkg_config /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/pkg-config-0.3.22/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 -C metadata=c86327b457c5bd0d -C extra-filename=-c86327b457c5bd0d --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: build failed
[INFO] running `Command { std: "docker" "inspect" "0793497df13c8a22fd9346d8fa4c6afc31d2609eaf96b41e5f18b5546ab2943c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0793497df13c8a22fd9346d8fa4c6afc31d2609eaf96b41e5f18b5546ab2943c", kill_on_drop: false }`
[INFO] [stdout] 0793497df13c8a22fd9346d8fa4c6afc31d2609eaf96b41e5f18b5546ab2943c