[INFO] fetching crate omics-tools 0.1.0... [INFO] checking omics-tools-0.1.0 against master#936f2600b6c903b04387f74ed5cbce88bb06d243 for pr-91141 [INFO] extracting crate omics-tools 0.1.0 into /workspace/builds/worker-65/source [INFO] validating manifest of crates.io crate omics-tools 0.1.0 on toolchain 936f2600b6c903b04387f74ed5cbce88bb06d243 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate omics-tools 0.1.0 [INFO] finished tweaking crates.io crate omics-tools 0.1.0 [INFO] tweaked toml for crates.io crate omics-tools 0.1.0 written to /workspace/builds/worker-65/source/Cargo.toml [INFO] crate crates.io crate omics-tools 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1ca969c91f9f827c4982ad195b15024235927de238ec4725784fd3b583c6dbc1 [INFO] running `Command { std: "docker" "start" "-a" "1ca969c91f9f827c4982ad195b15024235927de238ec4725784fd3b583c6dbc1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1ca969c91f9f827c4982ad195b15024235927de238ec4725784fd3b583c6dbc1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1ca969c91f9f827c4982ad195b15024235927de238ec4725784fd3b583c6dbc1", kill_on_drop: false }` [INFO] [stdout] 1ca969c91f9f827c4982ad195b15024235927de238ec4725784fd3b583c6dbc1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+936f2600b6c903b04387f74ed5cbce88bb06d243" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5edca700b0452c6a650cf4cd83da36e7f6f0fa5478b91e710f801f153b3840b9 [INFO] running `Command { std: "docker" "start" "-a" "5edca700b0452c6a650cf4cd83da36e7f6f0fa5478b91e710f801f153b3840b9", kill_on_drop: false }` [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling syn v1.0.40 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Checking tinyvec v0.3.4 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Checking lazy_static v0.2.11 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking exitcode v1.1.2 [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Checking unicode-bidi v0.3.4 [INFO] [stderr] Checking unreachable v1.0.0 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking log v0.4.11 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking unicode-normalization v0.1.13 [INFO] [stderr] Checking thread_local v0.3.4 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Checking idna v0.2.0 [INFO] [stderr] Compiling cc v1.0.59 [INFO] [stderr] Checking url v2.1.1 [INFO] [stderr] Compiling openssl-src v111.10.2+1.1.1g [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.16 [INFO] [stderr] Compiling curl-sys v0.4.36+curl-7.71.1 [INFO] [stderr] Compiling hts-sys v1.10.3 [INFO] [stderr] Compiling openssl-sys v0.9.58 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Checking chrono v0.4.15 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Compiling structopt-derive v0.4.10 [INFO] [stderr] Checking stderrlog v0.4.3 [INFO] [stderr] Checking rayon-core v1.8.0 [INFO] [stderr] Checking thiserror v1.0.20 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking structopt v0.3.17 [INFO] [stderr] Checking rust-htslib v0.32.0 [INFO] [stderr] Checking omics-tools v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bam-util.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bam-util.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `quiet` [INFO] [stdout] --> src/bin/bam-util.rs:15:3 [INFO] [stdout] | [INFO] [stdout] 15 | quiet: bool, [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `verbose` [INFO] [stdout] --> src/bin/bam-util.rs:16:3 [INFO] [stdout] | [INFO] [stdout] 16 | verbose: usize, [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `ts` [INFO] [stdout] --> src/bin/bam-util.rs:17:3 [INFO] [stdout] | [INFO] [stdout] 17 | ts: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `quiet` [INFO] [stdout] --> src/bin/bam-util.rs:15:3 [INFO] [stdout] | [INFO] [stdout] 15 | quiet: bool, [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `verbose` [INFO] [stdout] --> src/bin/bam-util.rs:16:3 [INFO] [stdout] | [INFO] [stdout] 16 | verbose: usize, [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `ts` [INFO] [stdout] --> src/bin/bam-util.rs:17:3 [INFO] [stdout] | [INFO] [stdout] 17 | ts: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 27s [INFO] running `Command { std: "docker" "inspect" "5edca700b0452c6a650cf4cd83da36e7f6f0fa5478b91e710f801f153b3840b9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5edca700b0452c6a650cf4cd83da36e7f6f0fa5478b91e710f801f153b3840b9", kill_on_drop: false }` [INFO] [stdout] 5edca700b0452c6a650cf4cd83da36e7f6f0fa5478b91e710f801f153b3840b9