[INFO] fetching crate netcdf 0.6.1... [INFO] testing netcdf-0.6.1 against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] extracting crate netcdf 0.6.1 into /workspace/builds/worker-53/source [INFO] validating manifest of crates.io crate netcdf 0.6.1 on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate netcdf 0.6.1 [INFO] finished tweaking crates.io crate netcdf 0.6.1 [INFO] tweaked toml for crates.io crate netcdf 0.6.1 written to /workspace/builds/worker-53/source/Cargo.toml [INFO] crate crates.io crate netcdf 0.6.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded hdf5-sys v0.7.1 [INFO] [stderr] Downloaded thread_local v1.1.2 [INFO] [stderr] Downloaded winreg v0.8.0 [INFO] [stderr] Downloaded libc v0.2.84 [INFO] [stderr] Downloaded libz-sys v1.1.2 [INFO] [stderr] Downloaded netcdf-sys v0.3.4 [INFO] [stderr] Downloaded netcdf-src v0.1.3 [INFO] [stderr] Downloaded hdf5-src v0.7.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-53/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-53/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f64a937b7ba263d5b46793ca83e8a319535980c7907d5e29327499be0808d296 [INFO] running `Command { std: "docker" "start" "-a" "f64a937b7ba263d5b46793ca83e8a319535980c7907d5e29327499be0808d296", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f64a937b7ba263d5b46793ca83e8a319535980c7907d5e29327499be0808d296", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f64a937b7ba263d5b46793ca83e8a319535980c7907d5e29327499be0808d296", kill_on_drop: false }` [INFO] [stdout] f64a937b7ba263d5b46793ca83e8a319535980c7907d5e29327499be0808d296 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-53/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-53/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8684d5a96200e818f6f155970dc6c8fa7314e6dba0bc52b62620e238a862f062 [INFO] running `Command { std: "docker" "start" "-a" "8684d5a96200e818f6f155970dc6c8fa7314e6dba0bc52b62620e238a862f062", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling once_cell v1.5.2 [INFO] [stderr] Compiling regex-syntax v0.6.22 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling cc v1.0.66 [INFO] [stderr] Compiling libc v0.2.84 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling netcdf-sys v0.3.4 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling thread_local v1.1.2 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling regex v1.4.3 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-1b5021177b08d68b/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55d6037824dc - std::backtrace_rs::backtrace::libunwind::trace::h7630ba4cba718aa0 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x55d6037824dc - std::backtrace_rs::backtrace::trace_unsynchronized::he7498e79c157f5ac [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55d6037824dc - std::sys_common::backtrace::_print_fmt::hdaebadaee17bca49 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55d6037824dc - ::fmt::h82b0e3aaf8a96140 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55d6037a11cc - core::fmt::write::h72801a82c94e6ff1 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/core/src/fmt/mod.rs:1149:17 [INFO] [stderr] 5: 0x55d60377eca5 - std::io::Write::write_fmt::hc2da38dc44811df8 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/io/mod.rs:1697:15 [INFO] [stderr] 6: 0x55d603783e50 - std::sys_common::backtrace::_print::h1c9a1d19c48821c1 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55d603783e50 - std::sys_common::backtrace::print::h7ce8802039fa9d0e [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55d603783e50 - std::panicking::default_hook::{{closure}}::hb2a74a8c1499c326 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:211:50 [INFO] [stderr] 9: 0x55d6037839fb - std::panicking::default_hook::hf4f180b00076f2b2 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:228:9 [INFO] [stderr] 10: 0x55d603784504 - std::panicking::rust_panic_with_hook::he85ce8435493b711 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:606:17 [INFO] [stderr] 11: 0x55d6035a9812 - std::panicking::begin_panic::{{closure}}::h88399fedc2d4e742 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:526:9 [INFO] [stderr] 12: 0x55d6035a94b9 - std::sys_common::backtrace::__rust_end_short_backtrace::h430b5cce4945b99c [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stderr] 13: 0x55d6035a9753 - std::panicking::begin_panic::h49da6780978a9b74 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:525:12 [INFO] [stderr] 14: 0x55d6035799d7 - build_script_build::LibrarySearcher::try_locate_hdf5_library::h94964d9f791dbd7e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x55d60357b177 - build_script_build::main::h564450c69066b955 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x55d6035809eb - core::ops::function::FnOnce::call_once::h6a58030495beaf48 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55d60358728e - std::sys_common::backtrace::__rust_begin_short_backtrace::hc00e07ff148adfa6 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stderr] 18: 0x55d603587321 - std::rt::lang_start::{{closure}}::h6b03565d03304714 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/rt.rs:145:18 [INFO] [stderr] 19: 0x55d603781d21 - core::ops::function::impls:: for &F>::call_once::h0e73392810ecd318 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55d603781d21 - std::panicking::try::do_call::h12dcb4a4f352a507 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:406:40 [INFO] [stderr] 21: 0x55d603781d21 - std::panicking::try::h0d978c76ab4a3863 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:370:19 [INFO] [stderr] 22: 0x55d603781d21 - std::panic::catch_unwind::hab40227675186980 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panic.rs:133:14 [INFO] [stderr] 23: 0x55d603781d21 - std::rt::lang_start_internal::{{closure}}::hc34786299e7d2cf7 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/rt.rs:128:48 [INFO] [stderr] 24: 0x55d603781d21 - std::panicking::try::do_call::h38e7a9128f21d387 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:406:40 [INFO] [stderr] 25: 0x55d603781d21 - std::panicking::try::h32d4e72fd8922bce [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panicking.rs:370:19 [INFO] [stderr] 26: 0x55d603781d21 - std::panic::catch_unwind::h9a345671d889d41f [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/panic.rs:133:14 [INFO] [stderr] 27: 0x55d603781d21 - std::rt::lang_start_internal::h9e691a4f557eb2a3 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/rt.rs:128:20 [INFO] [stderr] 28: 0x55d6035872f0 - std::rt::lang_start::haadf84968b8e8250 [INFO] [stderr] at /rustc/722e1797249a965b6335aebd65d777f917e498f1/library/std/src/rt.rs:144:17 [INFO] [stderr] 29: 0x55d60357c61c - main [INFO] [stderr] 30: 0x7f30013420b3 - __libc_start_main [INFO] [stderr] 31: 0x55d603574d9e - _start [INFO] [stderr] 32: 0x0 - [INFO] running `Command { std: "docker" "inspect" "8684d5a96200e818f6f155970dc6c8fa7314e6dba0bc52b62620e238a862f062", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8684d5a96200e818f6f155970dc6c8fa7314e6dba0bc52b62620e238a862f062", kill_on_drop: false }` [INFO] [stdout] 8684d5a96200e818f6f155970dc6c8fa7314e6dba0bc52b62620e238a862f062