[INFO] fetching crate mfqe 0.5.0... [INFO] testing mfqe-0.5.0 against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] extracting crate mfqe 0.5.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate mfqe 0.5.0 on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate mfqe 0.5.0 [INFO] finished tweaking crates.io crate mfqe 0.5.0 [INFO] tweaked toml for crates.io crate mfqe 0.5.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate crates.io crate mfqe 0.5.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded crossbeam-deque v0.5.2 [INFO] [stderr] Downloaded memoffset v0.2.1 [INFO] [stderr] Downloaded miniz_oxide v0.3.5 [INFO] [stderr] Downloaded crossbeam-epoch v0.6.1 [INFO] [stderr] Downloaded adler32 v1.0.4 [INFO] [stderr] Downloaded crossbeam-epoch v0.5.2 [INFO] [stderr] Downloaded crossbeam-utils v0.5.0 [INFO] [stderr] Downloaded crossbeam v0.4.1 [INFO] [stderr] Downloaded flate2 v1.0.12 [INFO] [stderr] Downloaded crossbeam-channel v0.2.6 [INFO] [stderr] Downloaded slice-deque v0.1.16 [INFO] [stderr] Downloaded seq_io v0.3.0 [INFO] [stderr] Downloaded buf_redux v0.7.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bfdff8d4fbbd179d21db41aa3de7f15ccf4a50b6065821c603c21e3b9eb4beae [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "bfdff8d4fbbd179d21db41aa3de7f15ccf4a50b6065821c603c21e3b9eb4beae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bfdff8d4fbbd179d21db41aa3de7f15ccf4a50b6065821c603c21e3b9eb4beae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bfdff8d4fbbd179d21db41aa3de7f15ccf4a50b6065821c603c21e3b9eb4beae", kill_on_drop: false }` [INFO] [stdout] bfdff8d4fbbd179d21db41aa3de7f15ccf4a50b6065821c603c21e3b9eb4beae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d4ffa46962674850d1869d9631d5bd7455bee589e7dc2dc9e08e709b8d1b458d [INFO] running `Command { std: "docker" "start" "-a" "d4ffa46962674850d1869d9631d5bd7455bee589e7dc2dc9e08e709b8d1b458d", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.65 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling nodrop v0.1.14 [INFO] [stderr] Compiling memoffset v0.2.1 [INFO] [stderr] Compiling smallvec v0.6.12 [INFO] [stderr] Compiling crossbeam-utils v0.5.0 [INFO] [stderr] Compiling syn v1.0.7 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling serde v1.0.102 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling unicode-width v0.1.6 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling owning_ref v0.4.0 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling arrayvec v0.4.12 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling parking_lot_core v0.3.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling lock_api v0.1.5 [INFO] [stderr] Compiling crossbeam-epoch v0.6.1 [INFO] [stderr] Compiling crossbeam-epoch v0.5.2 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling crossbeam-deque v0.5.2 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling rand v0.5.6 [INFO] [stderr] Compiling slice-deque v0.1.16 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling flate2 v1.0.12 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling buf_redux v0.7.1 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling parking_lot v0.6.4 [INFO] [stderr] Compiling crossbeam-channel v0.2.6 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling crossbeam v0.4.1 [INFO] [stderr] Compiling serde_derive v1.0.102 [INFO] [stderr] Compiling seq_io v0.3.0 [INFO] [stderr] Compiling mfqe v0.5.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 06s [INFO] running `Command { std: "docker" "inspect" "d4ffa46962674850d1869d9631d5bd7455bee589e7dc2dc9e08e709b8d1b458d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d4ffa46962674850d1869d9631d5bd7455bee589e7dc2dc9e08e709b8d1b458d", kill_on_drop: false }` [INFO] [stdout] d4ffa46962674850d1869d9631d5bd7455bee589e7dc2dc9e08e709b8d1b458d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] c52b39a4ecf547620c6486d085475ffbd881500c7139db58ea23e624543b0da6 [INFO] running `Command { std: "docker" "start" "-a" "c52b39a4ecf547620c6486d085475ffbd881500c7139db58ea23e624543b0da6", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.0.46 [INFO] [stderr] Compiling winapi v0.3.8 [INFO] [stderr] Compiling cgmath v0.16.1 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling rgb v0.8.14 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling itoa v0.4.4 [INFO] [stderr] Compiling remove_dir_all v0.5.2 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling getrandom v0.1.13 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling synstructure v0.12.1 [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling serde_json v1.0.41 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling failure_derive v0.1.6 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling tempfile v3.1.0 [INFO] [stderr] Compiling backtrace v0.3.40 [INFO] [stderr] Compiling failure v0.1.6 [INFO] [stderr] Compiling winconsole v0.10.0 [INFO] [stderr] Compiling colored v1.8.0 [INFO] [stderr] Compiling assert_cli v0.6.3 [INFO] [stderr] Compiling mfqe v0.5.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 25.52s [INFO] running `Command { std: "docker" "inspect" "c52b39a4ecf547620c6486d085475ffbd881500c7139db58ea23e624543b0da6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c52b39a4ecf547620c6486d085475ffbd881500c7139db58ea23e624543b0da6", kill_on_drop: false }` [INFO] [stdout] c52b39a4ecf547620c6486d085475ffbd881500c7139db58ea23e624543b0da6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] de98489fe6bd7c4181248c3a47cf6508e10211963d27647381853d57e375d4ee [INFO] running `Command { std: "docker" "start" "-a" "de98489fe6bd7c4181248c3a47cf6508e10211963d27647381853d57e375d4ee", kill_on_drop: false }` [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:32:18 [INFO] [stderr] | [INFO] [stderr] 32 | \n\ [INFO] [stderr] | __________________^ [INFO] [stderr] 33 | | [INFO] [stderr] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:35:63 [INFO] [stderr] | [INFO] [stderr] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stderr] | _______________________________________________________________^ [INFO] [stderr] 36 | | [INFO] [stderr] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:38:37 [INFO] [stderr] | [INFO] [stderr] 38 | (without comments).\n\ [INFO] [stderr] | _____________________________________^ [INFO] [stderr] 39 | | [INFO] [stderr] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: `mfqe` (bin "mfqe") generated 3 warnings [INFO] [stderr] warning: `mfqe` (bin "mfqe" test) generated 3 warnings (3 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.14s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/mfqe-ce699277f53aeb17) [INFO] [stdout] [INFO] [stderr] Running tests/test_cmdline.rs (/opt/rustwide/target/debug/deps/test_cmdline-5ca5d5c523e51b1f) [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_fastq_by_stdin ... ok [INFO] [stdout] test tests::test_fasta_by_file ... ok [INFO] [stdout] test tests::test_fasta_by_stdin ... ok [INFO] [stdout] test tests::test_fastq_by_file ... ok [INFO] [stdout] test tests::test_define_sequence_names ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.40s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "de98489fe6bd7c4181248c3a47cf6508e10211963d27647381853d57e375d4ee", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "de98489fe6bd7c4181248c3a47cf6508e10211963d27647381853d57e375d4ee", kill_on_drop: false }` [INFO] [stdout] de98489fe6bd7c4181248c3a47cf6508e10211963d27647381853d57e375d4ee