[INFO] fetching crate gkl 0.1.0... [INFO] testing gkl-0.1.0 against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] extracting crate gkl 0.1.0 into /workspace/builds/worker-42/source [INFO] validating manifest of crates.io crate gkl 0.1.0 on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gkl 0.1.0 [INFO] finished tweaking crates.io crate gkl 0.1.0 [INFO] tweaked toml for crates.io crate gkl 0.1.0 written to /workspace/builds/worker-42/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 99b46ec6adfad52ac509b5dbd63b19ded6563f81988d21db58458eb51eadb818 [INFO] running `Command { std: "docker" "start" "-a" "99b46ec6adfad52ac509b5dbd63b19ded6563f81988d21db58458eb51eadb818", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "99b46ec6adfad52ac509b5dbd63b19ded6563f81988d21db58458eb51eadb818", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "99b46ec6adfad52ac509b5dbd63b19ded6563f81988d21db58458eb51eadb818", kill_on_drop: false }` [INFO] [stdout] 99b46ec6adfad52ac509b5dbd63b19ded6563f81988d21db58458eb51eadb818 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 66d00885ddfc57e30bdec31d692fed7d020e026b7fc3ead6ff4f692a8b32ecff [INFO] running `Command { std: "docker" "start" "-a" "66d00885ddfc57e30bdec31d692fed7d020e026b7fc3ead6ff4f692a8b32ecff", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling gkl v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 5.25s [INFO] running `Command { std: "docker" "inspect" "66d00885ddfc57e30bdec31d692fed7d020e026b7fc3ead6ff4f692a8b32ecff", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "66d00885ddfc57e30bdec31d692fed7d020e026b7fc3ead6ff4f692a8b32ecff", kill_on_drop: false }` [INFO] [stdout] 66d00885ddfc57e30bdec31d692fed7d020e026b7fc3ead6ff4f692a8b32ecff [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ce1b6e7fcfc07e7841e27b03a3b1bcfe2878976d54801665224ef6fcc27d6e22 [INFO] running `Command { std: "docker" "start" "-a" "ce1b6e7fcfc07e7841e27b03a3b1bcfe2878976d54801665224ef6fcc27d6e22", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling gkl v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.69s [INFO] running `Command { std: "docker" "inspect" "ce1b6e7fcfc07e7841e27b03a3b1bcfe2878976d54801665224ef6fcc27d6e22", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ce1b6e7fcfc07e7841e27b03a3b1bcfe2878976d54801665224ef6fcc27d6e22", kill_on_drop: false }` [INFO] [stdout] ce1b6e7fcfc07e7841e27b03a3b1bcfe2878976d54801665224ef6fcc27d6e22 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-42/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 71307053fa216b076734734e3e85c22d2803c7018aa5a3f94675b30af5425d16 [INFO] running `Command { std: "docker" "start" "-a" "71307053fa216b076734734e3e85c22d2803c7018aa5a3f94675b30af5425d16", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.35s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/gkl-a82d2e503e87cd90) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/pairhmm.rs (/opt/rustwide/target/debug/deps/pairhmm-bb2e2694fd0b19ec) [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test simple ... ok [INFO] [stderr] Running tests/smithwaterman.rs (/opt/rustwide/target/debug/deps/smithwaterman-b24e6ffbee0d7b94) [INFO] [stdout] test data_file ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.15s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 9 tests [INFO] [stdout] test degenerate_alignment_with_indels_at_both_ends ... ok [INFO] [stdout] test indels_at_start_and_end ... ok [INFO] [stdout] test identical_alignments_with_differing_flank_lengths ... ok [INFO] [stdout] test read_aligned_to_ref_complex_alignment ... ok [INFO] [stdout] test single_element ... ok [INFO] [stdout] test odd_no_alignment ... ok [INFO] [stdout] test substring_match ... ok [INFO] [stdout] test two_element ... ok [INFO] [stdout] test substring_match_long ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] [stderr] Doc-tests gkl [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "71307053fa216b076734734e3e85c22d2803c7018aa5a3f94675b30af5425d16", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "71307053fa216b076734734e3e85c22d2803c7018aa5a3f94675b30af5425d16", kill_on_drop: false }` [INFO] [stdout] 71307053fa216b076734734e3e85c22d2803c7018aa5a3f94675b30af5425d16