[INFO] fetching crate checkm 0.1.0... [INFO] testing checkm-0.1.0 against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] extracting crate checkm 0.1.0 into /workspace/builds/worker-89/source [INFO] validating manifest of crates.io crate checkm 0.1.0 on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate checkm 0.1.0 [INFO] finished tweaking crates.io crate checkm 0.1.0 [INFO] tweaked toml for crates.io crate checkm 0.1.0 written to /workspace/builds/worker-89/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 942eea7f049ec338aafbeedfe11b18f510e06c62cab358a15a3c5526d1c29689 [INFO] running `Command { std: "docker" "start" "-a" "942eea7f049ec338aafbeedfe11b18f510e06c62cab358a15a3c5526d1c29689", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "942eea7f049ec338aafbeedfe11b18f510e06c62cab358a15a3c5526d1c29689", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "942eea7f049ec338aafbeedfe11b18f510e06c62cab358a15a3c5526d1c29689", kill_on_drop: false }` [INFO] [stdout] 942eea7f049ec338aafbeedfe11b18f510e06c62cab358a15a3c5526d1c29689 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f68807111ac6753d5f4eb63f240ae3335bb1b9053fffab235da2553ec479470c [INFO] running `Command { std: "docker" "start" "-a" "f68807111ac6753d5f4eb63f240ae3335bb1b9053fffab235da2553ec479470c", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling libc v0.2.107 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling checkm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 9.32s [INFO] running `Command { std: "docker" "inspect" "f68807111ac6753d5f4eb63f240ae3335bb1b9053fffab235da2553ec479470c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f68807111ac6753d5f4eb63f240ae3335bb1b9053fffab235da2553ec479470c", kill_on_drop: false }` [INFO] [stdout] f68807111ac6753d5f4eb63f240ae3335bb1b9053fffab235da2553ec479470c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 32509da41fc72401daaf3cf47e5d83391ec22865d1248f6043bb14aea51600ff [INFO] running `Command { std: "docker" "start" "-a" "32509da41fc72401daaf3cf47e5d83391ec22865d1248f6043bb14aea51600ff", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling checkm v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 6.93s [INFO] running `Command { std: "docker" "inspect" "32509da41fc72401daaf3cf47e5d83391ec22865d1248f6043bb14aea51600ff", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "32509da41fc72401daaf3cf47e5d83391ec22865d1248f6043bb14aea51600ff", kill_on_drop: false }` [INFO] [stdout] 32509da41fc72401daaf3cf47e5d83391ec22865d1248f6043bb14aea51600ff [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-89/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 78e85f626bae41d2644ece48f04ebc0659c365184ab4560a61e6d0a5784a9eef [INFO] running `Command { std: "docker" "start" "-a" "78e85f626bae41d2644ece48f04ebc0659c365184ab4560a61e6d0a5784a9eef", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.04s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/checkm-4e3a8ee6482f97e7) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test test::test_retrieve ... ok [INFO] [stdout] test test::test_good_quality_genome_names ... ok [INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok [INFO] [stdout] test test::test_ordering_5times ... ok [INFO] [stdout] test test::test_ordering_4times ... ok [INFO] [stdout] test test::test_fasta_ordering_4times ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests checkm [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "78e85f626bae41d2644ece48f04ebc0659c365184ab4560a61e6d0a5784a9eef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "78e85f626bae41d2644ece48f04ebc0659c365184ab4560a61e6d0a5784a9eef", kill_on_drop: false }` [INFO] [stdout] 78e85f626bae41d2644ece48f04ebc0659c365184ab4560a61e6d0a5784a9eef