[INFO] cloning repository https://github.com/mooreryan/divnet-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mooreryan/divnet-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fdivnet-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fdivnet-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 3a7135431ccfdd9a1f48a9c313a9156b6a268a28 [INFO] testing mooreryan/divnet-rs against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fdivnet-rs" "/workspace/builds/worker-97/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-97/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mooreryan/divnet-rs on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mooreryan/divnet-rs [INFO] finished tweaking git repo https://github.com/mooreryan/divnet-rs [INFO] tweaked toml for git repo https://github.com/mooreryan/divnet-rs written to /workspace/builds/worker-97/source/Cargo.toml [INFO] crate git repo https://github.com/mooreryan/divnet-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded lapack-sys v0.12.1 [INFO] [stderr] Downloaded blas-sys v0.7.1 [INFO] [stderr] Downloaded blas v0.20.0 [INFO] [stderr] Downloaded rand_distr v0.4.0 [INFO] [stderr] Downloaded openblas-src v0.9.0 [INFO] [stderr] Downloaded lapack v0.16.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] be6a8c5140b75b4e52f500a1933a26fbf7be27a50b7c732ddc31a6da0e99b1db [INFO] running `Command { std: "docker" "start" "-a" "be6a8c5140b75b4e52f500a1933a26fbf7be27a50b7c732ddc31a6da0e99b1db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "be6a8c5140b75b4e52f500a1933a26fbf7be27a50b7c732ddc31a6da0e99b1db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "be6a8c5140b75b4e52f500a1933a26fbf7be27a50b7c732ddc31a6da0e99b1db", kill_on_drop: false }` [INFO] [stdout] be6a8c5140b75b4e52f500a1933a26fbf7be27a50b7c732ddc31a6da0e99b1db [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 44cd2b345f7c319ec8153eedaf4580680a22fe5883c4921f63392918f7a9f2ff [INFO] running `Command { std: "docker" "start" "-a" "44cd2b345f7c319ec8153eedaf4580680a22fe5883c4921f63392918f7a9f2ff", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling getrandom v0.2.2 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling serde v1.0.106 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling openblas-src v0.9.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling proc-macro-error-attr v0.4.12 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling proc-macro-error v0.4.12 [INFO] [stderr] Compiling thread_local v1.1.0 [INFO] [stderr] Compiling blas-sys v0.7.1 [INFO] [stderr] Compiling lapack-sys v0.12.1 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling rand_core v0.6.1 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling rand_chacha v0.3.0 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling rand v0.8.2 [INFO] [stderr] Compiling regex v1.3.6 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling rand_distr v0.4.0 [INFO] [stderr] Compiling chrono v0.4.11 [INFO] [stderr] Compiling blas v0.20.0 [INFO] [stderr] Compiling lapack v0.16.0 [INFO] [stderr] Compiling env_logger v0.8.2 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.106 [INFO] [stderr] Compiling structopt-derive v0.4.5 [INFO] [stderr] Compiling structopt v0.3.12 [INFO] [stderr] Compiling toml v0.5.6 [INFO] [stderr] Compiling divnet-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 59s [INFO] running `Command { std: "docker" "inspect" "44cd2b345f7c319ec8153eedaf4580680a22fe5883c4921f63392918f7a9f2ff", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "44cd2b345f7c319ec8153eedaf4580680a22fe5883c4921f63392918f7a9f2ff", kill_on_drop: false }` [INFO] [stdout] 44cd2b345f7c319ec8153eedaf4580680a22fe5883c4921f63392918f7a9f2ff [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 0f3449ae28cb9e7395f637b8b0e6363c0ec6d0b9b0dc6f605ece85a2cd7ce1b5 [INFO] running `Command { std: "docker" "start" "-a" "0f3449ae28cb9e7395f637b8b0e6363c0ec6d0b9b0dc6f605ece85a2cd7ce1b5", kill_on_drop: false }` [INFO] [stderr] Compiling divnet-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 16.20s [INFO] running `Command { std: "docker" "inspect" "0f3449ae28cb9e7395f637b8b0e6363c0ec6d0b9b0dc6f605ece85a2cd7ce1b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0f3449ae28cb9e7395f637b8b0e6363c0ec6d0b9b0dc6f605ece85a2cd7ce1b5", kill_on_drop: false }` [INFO] [stdout] 0f3449ae28cb9e7395f637b8b0e6363c0ec6d0b9b0dc6f605ece85a2cd7ce1b5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-97/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7789a3742e5c75776eb8591476d777210eddaedf6853de1ffdf2cee5a5a7d663 [INFO] running `Command { std: "docker" "start" "-a" "7789a3742e5c75776eb8591476d777210eddaedf6853de1ffdf2cee5a5a7d663", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 6.92s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/divnet_rs-a89ceca529c83b54) [INFO] [stdout] [INFO] [stdout] running 53 tests [INFO] [stdout] test fit_aitchison::tests::diagonal_network_makes_diagonal_networks ... ok [INFO] [stdout] test conversions::tests::to_log_ratios_handles_zero_counts_in_non_base_taxa ... ok [INFO] [stdout] test conversions::tests::to_log_ratios_works ... ok [INFO] [stdout] test conversions::tests::output_matches_r::to_log_ratios_matches_r ... ok [INFO] [stdout] test conversions::tests::output_matches_r::you_get_the_correct_compositions_from_counts ... ok [INFO] [stdout] test conversions::tests::to_log_ratios_handles_zero_counts_in_base_taxa ... ok [INFO] [stdout] test conversions::tests::output_matches_r::to_composition_matrix_matches_r ... ok [INFO] [stdout] test fit_aitchison::tests::remove_at_returns_a_vec_without_idx ... ok [INFO] [stdout] test fit_aitchison::tests::streaming_mean_works ... ok [INFO] [stdout] test matrix::ewise::tests::test_ln ... ok [INFO] [stdout] test matrix::ewise::tests::test_mul ... ok [INFO] [stdout] test matrix::ewise::tests::test_sub ... ok [INFO] [stdout] test matrix::ewise::tests::zipmap_maps_a_fn_onto_two_vecs_lockstep ... ok [INFO] [stdout] test matrix::tests::center_centers_cols_by_mean ... ok [INFO] [stdout] test matrix::tests::center_centers_rows_by_mean ... ok [INFO] [stdout] test matrix::ewise::tests::test_add ... ok [INFO] [stdout] test matrix::tests::col_sums_sums_colss ... ok [INFO] [stdout] test matrix::tests::covariance_gets_cov_matrix ... ok [INFO] [stdout] test matrix::tests::colmeans_gets_column_means ... ok [INFO] [stdout] test matrix::ewise::tests::sum_sums_elements ... ok [INFO] [stdout] test matrix::ewise::tests::map_maps_a_fn_onto_a_vec ... ok [INFO] [stdout] test matrix::ewise::tests::test_div ... ok [INFO] [stdout] test matrix::tests::covariance_gets_covariance_of_two_slices ... ok [INFO] [stdout] test matrix::tests::diag_gets_elements_on_the_diagonal ... ok [INFO] [stdout] test matrix::tests::element_wise_ops1::ln_does_element_wise_natural_log ... ok [INFO] [stdout] test matrix::tests::element_wise_ops1::exp_does_element_wise_exp ... ok [INFO] [stdout] test matrix::tests::element_wise_ops2::esub_does_elementwise_subtraction ... ok [INFO] [stdout] test matrix::tests::equality::approx_eq_checks_equality_within_tolerance ... ok [INFO] [stdout] test matrix::tests::element_wise_ops2::emul_does_elementwise_multiplication ... ok [INFO] [stdout] test matrix::tests::equality::eq_checks_equality ... ok [INFO] [stdout] test matrix::tests::get_gets_elements ... ok [INFO] [stdout] test matrix::tests::get_unchecked_gets_elements_without_bounds_checking ... ok [INFO] [stdout] test matrix::tests::element_wise_ops2::ediv_does_elementwise_division ... ok [INFO] [stdout] test matrix::tests::element_wise_ops2::eadd_does_elementwise_addition ... ok [INFO] [stdout] test matrix::tests::col_returns_a_column_slice ... ok [INFO] [stdout] test matrix::tests::row_gets_a_single_row_from_array ... ok [INFO] [stdout] test matrix::tests::eigen_gets_eigenvalues_and_vectors ... ok [INFO] [stdout] test matrix::tests::mmul2_multiplies_two_matrices ... ok [INFO] [stdout] test matrix::tests::multiple_cols_returns_mutliple_columns ... ok [INFO] [stdout] test matrix::tests::set_sets_elements ... ok [INFO] [stdout] test matrix::tests::set_unchecked_sets_elements_without_bounds_checking ... ok [INFO] [stdout] test matrix::tests::to_diag_makes_a_vec_into_diagonal_array ... ok [INFO] [stdout] test matrix::tests::transpose_transposes_a_matrix ... ok [INFO] [stdout] test matrix::tests::variance_gets_variance_of_slice ... ok [INFO] [stdout] test matrix::tests::row_sums_sums_rows ... ok [INFO] [stdout] test matrix::tests::summary::sum_sums_all_elems ... ok [INFO] [stdout] test fit_aitchison::tests::streaming_mean_panics_on_empty_array - should panic ... ok [INFO] [stdout] test matrix::ewise::tests::zipmap_panics_if_vecs_are_different_lengths - should panic ... ok [INFO] [stdout] test matrix::tests::solve ... ok [INFO] [stdout] test mvrnorm::tests::mvrnorm_gives_correct_mu_and_sigma ... ok [INFO] [stdout] test fit_aitchison::tests::fit_aitchison_gives_reasonable_result ... ok [INFO] [stdout] test fit_aitchison::tests::fit_aitchison_gives_reasonable_result2 ... ok [INFO] [stdout] test multinomial::tests::test_multinomial ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 53 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.29s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/divnet_rs-9219f5a5f9387a3c) [INFO] [stdout] [INFO] [stderr] Doc-tests divnet-rs [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "7789a3742e5c75776eb8591476d777210eddaedf6853de1ffdf2cee5a5a7d663", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7789a3742e5c75776eb8591476d777210eddaedf6853de1ffdf2cee5a5a7d663", kill_on_drop: false }` [INFO] [stdout] 7789a3742e5c75776eb8591476d777210eddaedf6853de1ffdf2cee5a5a7d663