[INFO] cloning repository https://github.com/URI-ABD/genomic_distance [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/URI-ABD/genomic_distance" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 4c1b7afcda5ed9dd2d4704269275c7dcff4fae7d [INFO] testing URI-ABD/genomic_distance against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance" "/workspace/builds/worker-54/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-54/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/URI-ABD/genomic_distance on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/URI-ABD/genomic_distance [INFO] finished tweaking git repo https://github.com/URI-ABD/genomic_distance [INFO] tweaked toml for git repo https://github.com/URI-ABD/genomic_distance written to /workspace/builds/worker-54/source/Cargo.toml [INFO] crate git repo https://github.com/URI-ABD/genomic_distance already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1ed3d8a226b35ff316af712d630cf6785d6325a71d7bf78ad0c72b9815efba08 [INFO] running `Command { std: "docker" "start" "-a" "1ed3d8a226b35ff316af712d630cf6785d6325a71d7bf78ad0c72b9815efba08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1ed3d8a226b35ff316af712d630cf6785d6325a71d7bf78ad0c72b9815efba08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1ed3d8a226b35ff316af712d630cf6785d6325a71d7bf78ad0c72b9815efba08", kill_on_drop: false }` [INFO] [stdout] 1ed3d8a226b35ff316af712d630cf6785d6325a71d7bf78ad0c72b9815efba08 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5fb1aafb37c2001196a91ed55a20d1505d3b85fbc2813ce8293bfc83ce0b3824 [INFO] running `Command { std: "docker" "start" "-a" "5fb1aafb37c2001196a91ed55a20d1505d3b85fbc2813ce8293bfc83ce0b3824", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling libc v0.2.68 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling serde v1.0.105 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling cc v1.0.50 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling rustversion v1.0.2 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling ryu v1.0.3 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling standback v0.2.2 [INFO] [stderr] Compiling proc-macro-hack v0.5.15 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling bio v0.30.0 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling itoa v0.4.5 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling strum v0.16.0 [INFO] [stderr] Compiling bytecount v0.6.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling backtrace-sys v0.1.35 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling num_cpus v1.12.0 [INFO] [stderr] Compiling regex v1.3.6 [INFO] [stderr] Compiling backtrace v0.3.46 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.4 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Compiling statrs v0.11.0 [INFO] [stderr] Compiling crossbeam-queue v0.2.1 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling float-cmp v0.6.0 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling num v0.2.1 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling serde_derive v1.0.105 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling time-macros-impl v0.1.0 [INFO] [stderr] Compiling strum_macros v0.16.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling time-macros v0.1.0 [INFO] [stderr] Compiling time v0.2.9 [INFO] [stderr] Compiling bstr v0.2.12 [INFO] [stderr] Compiling multimap v0.6.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.6.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling genomic_distance v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 54.47s [INFO] running `Command { std: "docker" "inspect" "5fb1aafb37c2001196a91ed55a20d1505d3b85fbc2813ce8293bfc83ce0b3824", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5fb1aafb37c2001196a91ed55a20d1505d3b85fbc2813ce8293bfc83ce0b3824", kill_on_drop: false }` [INFO] [stdout] 5fb1aafb37c2001196a91ed55a20d1505d3b85fbc2813ce8293bfc83ce0b3824 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fec80076426ee6e8ed57b51b141b377c3d8d59f5c4d3b765d418512ed2a0fcbd [INFO] running `Command { std: "docker" "start" "-a" "fec80076426ee6e8ed57b51b141b377c3d8d59f5c4d3b765d418512ed2a0fcbd", kill_on_drop: false }` [INFO] [stderr] Compiling genomic_distance v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.95s [INFO] running `Command { std: "docker" "inspect" "fec80076426ee6e8ed57b51b141b377c3d8d59f5c4d3b765d418512ed2a0fcbd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fec80076426ee6e8ed57b51b141b377c3d8d59f5c4d3b765d418512ed2a0fcbd", kill_on_drop: false }` [INFO] [stdout] fec80076426ee6e8ed57b51b141b377c3d8d59f5c4d3b765d418512ed2a0fcbd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-54/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] d4d05879171e1dfd5bcaf0a19e0af99cfbe12d804a94d1db826c4fd3ce46bd78 [INFO] running `Command { std: "docker" "start" "-a" "d4d05879171e1dfd5bcaf0a19e0af99cfbe12d804a94d1db826c4fd3ce46bd78", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.26s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genomic_distance-c50ee8071b5d2c18) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "d4d05879171e1dfd5bcaf0a19e0af99cfbe12d804a94d1db826c4fd3ce46bd78", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d4d05879171e1dfd5bcaf0a19e0af99cfbe12d804a94d1db826c4fd3ce46bd78", kill_on_drop: false }` [INFO] [stdout] d4d05879171e1dfd5bcaf0a19e0af99cfbe12d804a94d1db826c4fd3ce46bd78