[INFO] cloning repository https://github.com/TianyiShi2001/rust-bio-edu [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TianyiShi2001/rust-bio-edu" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 536024de8524eb19c08b4381de4f4f2152616c94 [INFO] testing TianyiShi2001/rust-bio-edu against try#722e1797249a965b6335aebd65d777f917e498f1 for pr-91031 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTianyiShi2001%2Frust-bio-edu" "/workspace/builds/worker-80/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-80/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/TianyiShi2001/rust-bio-edu on toolchain 722e1797249a965b6335aebd65d777f917e498f1 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] finished tweaking git repo https://github.com/TianyiShi2001/rust-bio-edu [INFO] tweaked toml for git repo https://github.com/TianyiShi2001/rust-bio-edu written to /workspace/builds/worker-80/source/Cargo.toml [INFO] crate git repo https://github.com/TianyiShi2001/rust-bio-edu already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded simba v0.2.0 [INFO] [stderr] Downloaded nalgebra v0.22.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 835736add18ba759389393043c36e7bf4f00dd086ee54b63a3023bdaa48af1b8 [INFO] running `Command { std: "docker" "start" "-a" "835736add18ba759389393043c36e7bf4f00dd086ee54b63a3023bdaa48af1b8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "835736add18ba759389393043c36e7bf4f00dd086ee54b63a3023bdaa48af1b8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "835736add18ba759389393043c36e7bf4f00dd086ee54b63a3023bdaa48af1b8", kill_on_drop: false }` [INFO] [stdout] 835736add18ba759389393043c36e7bf4f00dd086ee54b63a3023bdaa48af1b8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 56e343ad3d92bb20bdb177f28135d810eae365174dea2477d0c5cb3fc65e0cb0 [INFO] running `Command { std: "docker" "start" "-a" "56e343ad3d92bb20bdb177f28135d810eae365174dea2477d0c5cb3fc65e0cb0", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling either v1.6.0 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling rayon v1.4.1 [INFO] [stderr] Compiling generic-array v0.13.2 [INFO] [stderr] Compiling crossbeam-channel v0.4.4 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling paste v0.1.18 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling simba v0.2.0 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling rand_distr v0.2.2 [INFO] [stderr] Compiling nalgebra v0.22.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 42.39s [INFO] running `Command { std: "docker" "inspect" "56e343ad3d92bb20bdb177f28135d810eae365174dea2477d0c5cb3fc65e0cb0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "56e343ad3d92bb20bdb177f28135d810eae365174dea2477d0c5cb3fc65e0cb0", kill_on_drop: false }` [INFO] [stdout] 56e343ad3d92bb20bdb177f28135d810eae365174dea2477d0c5cb3fc65e0cb0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] da6cdde7e15388d95e1d288ad627316fb9fa0e7a09db6fbc72da19ab68efa674 [INFO] running `Command { std: "docker" "start" "-a" "da6cdde7e15388d95e1d288ad627316fb9fa0e7a09db6fbc72da19ab68efa674", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling cargo-husky v1.5.0 [INFO] [stderr] Compiling bio-edu v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 13.30s [INFO] running `Command { std: "docker" "inspect" "da6cdde7e15388d95e1d288ad627316fb9fa0e7a09db6fbc72da19ab68efa674", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "da6cdde7e15388d95e1d288ad627316fb9fa0e7a09db6fbc72da19ab68efa674", kill_on_drop: false }` [INFO] [stdout] da6cdde7e15388d95e1d288ad627316fb9fa0e7a09db6fbc72da19ab68efa674 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-80/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+722e1797249a965b6335aebd65d777f917e498f1" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 8ffc6bb113872abf08ca206ef309e10c6e3232a7c44846d0ab6645f8714f167b [INFO] running `Command { std: "docker" "start" "-a" "8ffc6bb113872abf08ca206ef309e10c6e3232a7c44846d0ab6645f8714f167b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 9.41s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/bio_edu-f599e0b8bd9d8439) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test alignment::scores::blosum62::tests::test_blosum62 ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_fill ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_get ... ok [INFO] [stdout] test utils::matrix::tests::test_matrix_set ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests bio-edu [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 595) ... ignored [INFO] [stdout] test src/alignment/pairwise/myers_miller.rs - alignment::pairwise::myers_miller::Aligner::find_dual_semiglobal_score_and_termini (line 600) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 42) ... ignored [INFO] [stdout] test src/alignment/pairwise/needleman_wunsch_2.rs - alignment::pairwise::needleman_wunsch_2 (line 76) ... ignored [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 4 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "8ffc6bb113872abf08ca206ef309e10c6e3232a7c44846d0ab6645f8714f167b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8ffc6bb113872abf08ca206ef309e10c6e3232a7c44846d0ab6645f8714f167b", kill_on_drop: false }` [INFO] [stdout] 8ffc6bb113872abf08ca206ef309e10c6e3232a7c44846d0ab6645f8714f167b