[INFO] fetching crate phyloprob 0.1.2... [INFO] testing phyloprob-0.1.2 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031 [INFO] extracting crate phyloprob 0.1.2 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate phyloprob 0.1.2 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate phyloprob 0.1.2 [INFO] finished tweaking crates.io crate phyloprob 0.1.2 [INFO] tweaked toml for crates.io crate phyloprob 0.1.2 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate phyloprob 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ordered-float v0.5.2 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded bit-set v0.4.0 [INFO] [stderr] Downloaded bv v0.7.4 [INFO] [stderr] Downloaded ndarray v0.9.1 [INFO] [stderr] Downloaded ucd-util v0.1.7 [INFO] [stderr] Downloaded bio v0.20.3 [INFO] [stderr] Downloaded bstr v0.2.11 [INFO] [stderr] Downloaded bytecount v0.3.2 [INFO] [stderr] Downloaded rna-algos v0.1.14 [INFO] [stderr] Downloaded bio-seq-algos v0.1.15 [INFO] [stderr] Downloaded rna-ss-params v0.1.16 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bfcee2a3d620d75649ff0c522b3f0c8eb87bd5b504323b25144376ec171e10fa [INFO] running `Command { std: "docker" "start" "-a" "bfcee2a3d620d75649ff0c522b3f0c8eb87bd5b504323b25144376ec171e10fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bfcee2a3d620d75649ff0c522b3f0c8eb87bd5b504323b25144376ec171e10fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bfcee2a3d620d75649ff0c522b3f0c8eb87bd5b504323b25144376ec171e10fa", kill_on_drop: false }` [INFO] [stdout] bfcee2a3d620d75649ff0c522b3f0c8eb87bd5b504323b25144376ec171e10fa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a561bbf9a7667dafe2fb5f3d68d2719c367f6bb494aa7e79268a90f714f271bc [INFO] running `Command { std: "docker" "start" "-a" "a561bbf9a7667dafe2fb5f3d68d2719c367f6bb494aa7e79268a90f714f271bc", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling serde v1.0.104 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling libc v0.2.67 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling ucd-util v0.1.7 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Compiling void v1.0.2 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling lazy_static v0.1.16 [INFO] [stderr] Compiling utf8-ranges v1.0.4 [INFO] [stderr] Compiling bit-vec v0.4.4 [INFO] [stderr] Compiling itoa v0.4.5 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling approx v0.1.1 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling lazy_static v0.2.11 [INFO] [stderr] Compiling unicode-width v0.1.7 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling getopts v0.2.21 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling unreachable v1.0.0 [INFO] [stderr] Compiling bit-set v0.4.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling time v0.1.42 [INFO] [stderr] Compiling num_cpus v1.12.0 [INFO] [stderr] Compiling bio-seq-algos v0.1.15 [INFO] [stderr] Compiling rna-ss-params v0.1.16 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v0.5.2 [INFO] [stderr] Compiling serde_derive v1.0.104 [INFO] [stderr] Compiling bstr v0.2.11 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling bio v0.20.3 [INFO] [stderr] Compiling rna-algos v0.1.14 [INFO] [stderr] Compiling phyloprob v0.1.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:18:63 [INFO] [stdout] | [INFO] [stdout] 18 | ... BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_braces)]` on by default [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 18 - pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] 18 + pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:29:65 [INFO] [stdout] | [INFO] [stdout] 29 | ...eMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 29 - pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] 29 + pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 10 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:32:72 [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 32.36s [INFO] running `Command { std: "docker" "inspect" "a561bbf9a7667dafe2fb5f3d68d2719c367f6bb494aa7e79268a90f714f271bc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a561bbf9a7667dafe2fb5f3d68d2719c367f6bb494aa7e79268a90f714f271bc", kill_on_drop: false }` [INFO] [stdout] a561bbf9a7667dafe2fb5f3d68d2719c367f6bb494aa7e79268a90f714f271bc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 25f9024388b064382d4245f0d94c80d1bcfe60a36e4935990b946cc0a00a9328 [INFO] running `Command { std: "docker" "start" "-a" "25f9024388b064382d4245f0d94c80d1bcfe60a36e4935990b946cc0a00a9328", kill_on_drop: false }` [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:18:63 [INFO] [stdout] | [INFO] [stdout] 18 | ... BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_braces)]` on by default [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 18 - pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] 18 + pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:29:65 [INFO] [stdout] | [INFO] [stdout] 29 | ...eMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 29 - pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] 29 + pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 10 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:32:72 [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling phyloprob v0.1.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:18:63 [INFO] [stdout] | [INFO] [stdout] 18 | ... BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_braces)]` on by default [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 18 - pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stdout] 18 + pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary braces around block return value [INFO] [stdout] --> src/utils.rs:29:65 [INFO] [stdout] | [INFO] [stdout] 29 | ...eMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] help: remove these braces [INFO] [stdout] | [INFO] [stdout] 29 - pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stdout] 29 + pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect(); [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:9:1 [INFO] [stdout] | [INFO] [stdout] 9 | / lazy_static! { [INFO] [stdout] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 11 | | [ [INFO] [stdout] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stdout] ... | [INFO] [stdout] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stdout] 30 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/main.rs:32:72 [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] help: add a "{}" format string to Display the message [INFO] [stdout] | [INFO] [stdout] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 10 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.31s [INFO] running `Command { std: "docker" "inspect" "25f9024388b064382d4245f0d94c80d1bcfe60a36e4935990b946cc0a00a9328", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "25f9024388b064382d4245f0d94c80d1bcfe60a36e4935990b946cc0a00a9328", kill_on_drop: false }` [INFO] [stdout] 25f9024388b064382d4245f0d94c80d1bcfe60a36e4935990b946cc0a00a9328 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] df01fc8aae13719b93c0f08b96bfad71fa2bd58c0959c8a687880e62ed0709dc [INFO] running `Command { std: "docker" "start" "-a" "df01fc8aae13719b93c0f08b96bfad71fa2bd58c0959c8a687880e62ed0709dc", kill_on_drop: false }` [INFO] [stderr] warning: unnecessary braces around block return value [INFO] [stderr] --> src/utils.rs:18:63 [INFO] [stderr] | [INFO] [stderr] 18 | ... BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stderr] | ^ ^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_braces)]` on by default [INFO] [stderr] help: remove these braces [INFO] [stderr] | [INFO] [stderr] 18 - pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = {RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect()}; [INFO] [stderr] 18 + pub static ref EXP_RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = RIBOSUM_85_60_BA_SCORE_MAT.iter().map(|(base_pair, &ba_score)| {(*base_pair, ba_score.exp())}).collect(); [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: unnecessary braces around block return value [INFO] [stderr] --> src/utils.rs:29:65 [INFO] [stderr] | [INFO] [stderr] 29 | ...eMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stderr] | ^ ^ [INFO] [stderr] | [INFO] [stderr] help: remove these braces [INFO] [stderr] | [INFO] [stderr] 29 - pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect()}; [INFO] [stderr] 29 + pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(*base_quadruple, bpa_score.exp())}).collect(); [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:9:1 [INFO] [stderr] | [INFO] [stderr] 9 | / lazy_static! { [INFO] [stderr] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stderr] 11 | | [ [INFO] [stderr] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stderr] ... | [INFO] [stderr] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stderr] 30 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stderr] --> src/utils.rs:9:1 [INFO] [stderr] | [INFO] [stderr] 9 | / lazy_static! { [INFO] [stderr] 10 | | pub static ref RIBOSUM_85_60_BA_SCORE_MAT: BaScoreMat = { [INFO] [stderr] 11 | | [ [INFO] [stderr] 12 | | (AA, 2.22), (AC, -1.86), (AG, -1.46), (AU, -1.39), [INFO] [stderr] ... | [INFO] [stderr] 29 | | pub static ref EXP_RIBOSUM_85_60_BPA_SCORE_MAT: BpaScoreMat = {RIBOSUM_85_60_BPA_SCORE_MAT.iter().map(|(base_quadruple, &bpa_score)| {(... [INFO] [stderr] 30 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in the macro `lazy_static` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: `phyloprob` (lib) generated 10 warnings (6 duplicates) [INFO] [stderr] warning: `phyloprob` (lib test) generated 10 warnings (10 duplicates) [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/main.rs:32:72 [INFO] [stderr] | [INFO] [stderr] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!(failure.to_string())} [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] help: add a "{}" format string to Display the message [INFO] [stderr] | [INFO] [stderr] 32 | Err(failure) => {print_program_usage(&program_name, &opts); panic!("{}", failure.to_string())} [INFO] [stderr] | +++++ [INFO] [stderr] [INFO] [stderr] warning: `phyloprob` (bin "phyloprob" test) generated 1 warning [INFO] [stderr] warning: `phyloprob` (bin "phyloprob") generated 1 warning (1 duplicate) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.39s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/phyloprob-7212bf3dcd505653) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/phyloprob-0bea28d0d779c2d8) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/tests.rs (/opt/rustwide/target/debug/deps/tests-39c790fa8854a875) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test test_phyloprob_program ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- test_phyloprob_program stdout ---- [INFO] [stdout] thread 'test_phyloprob_program' panicked at 'Failed to run the PhyloProb program.: Os { code: 2, kind: NotFound, message: "No such file or directory" }', tests/tests.rs:19:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x561cbce5b2ec - std::backtrace_rs::backtrace::libunwind::trace::h7630ba4cba718aa0 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stdout] 1: 0x561cbce5b2ec - std::backtrace_rs::backtrace::trace_unsynchronized::he7498e79c157f5ac [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x561cbce5b2ec - std::sys_common::backtrace::_print_fmt::hdaebadaee17bca49 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x561cbce5b2ec - ::fmt::h82b0e3aaf8a96140 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x561cbce7e16c - core::fmt::write::h72801a82c94e6ff1 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/fmt/mod.rs:1149:17 [INFO] [stdout] 5: 0x561cbce57225 - std::io::Write::write_fmt::h21d7683cabdb4c35 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/io/mod.rs:1697:15 [INFO] [stdout] 6: 0x561cbce5cd40 - std::sys_common::backtrace::_print::h1c9a1d19c48821c1 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x561cbce5cd40 - std::sys_common::backtrace::print::h7ce8802039fa9d0e [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x561cbce5cd40 - std::panicking::default_hook::{{closure}}::hb2a74a8c1499c326 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:211:50 [INFO] [stdout] 9: 0x561cbce5c926 - std::panicking::default_hook::hf4f180b00076f2b2 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:225:9 [INFO] [stdout] 10: 0x561cbce5d3f4 - std::panicking::rust_panic_with_hook::he85ce8435493b711 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:606:17 [INFO] [stdout] 11: 0x561cbce5ced0 - std::panicking::begin_panic_handler::{{closure}}::h31e15f69e6235bd2 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:502:13 [INFO] [stdout] 12: 0x561cbce5b7a4 - std::sys_common::backtrace::__rust_end_short_backtrace::hfce2fadb61aaa3ae [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stdout] 13: 0x561cbce5ce39 - rust_begin_unwind [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:498:5 [INFO] [stdout] 14: 0x561cbcdfd861 - core::panicking::panic_fmt::h7b8580d81fcbbacd [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/panicking.rs:107:14 [INFO] [stdout] 15: 0x561cbcdfd953 - core::result::unwrap_failed::h885d3f7beb571353 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/result.rs:1613:5 [INFO] [stdout] 16: 0x561cbce02d4c - core::result::Result::expect::h9f4cf5630b0c8f48 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/result.rs:1255:23 [INFO] [stdout] 17: 0x561cbcdff852 - tests::run_command::hd1af134341506879 [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:19:3 [INFO] [stdout] 18: 0x561cbcdff95d - tests::test_phyloprob_program::h3b8b4b9c220b13f2 [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:12:3 [INFO] [stdout] 19: 0x561cbcdff88a - tests::test_phyloprob_program::{{closure}}::h30a599bf7021e58b [INFO] [stdout] at /opt/rustwide/workdir/tests/tests.rs:8:1 [INFO] [stdout] 20: 0x561cbce012ee - core::ops::function::FnOnce::call_once::h03c4731557cdd3b7 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x561cbce373c3 - core::ops::function::FnOnce::call_once::h449577f1c5b077cb [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x561cbce373c3 - test::__rust_begin_short_backtrace::h8c2a0a5090591869 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/test/src/lib.rs:585:5 [INFO] [stdout] 23: 0x561cbce35f57 - as core::ops::function::FnOnce>::call_once::hea00a22128a38543 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 24: 0x561cbce35f57 - as core::ops::function::FnOnce<()>>::call_once::he10b35c3c50d78a0 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 25: 0x561cbce35f57 - std::panicking::try::do_call::hc868e78bbc5af2ab [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:406:40 [INFO] [stdout] 26: 0x561cbce35f57 - std::panicking::try::he468aede74df1b04 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:370:19 [INFO] [stdout] 27: 0x561cbce35f57 - std::panic::catch_unwind::hce3c9152e1cf772d [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panic.rs:133:14 [INFO] [stdout] 28: 0x561cbce35f57 - test::run_test_in_process::h9c4ab8162080cf8c [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/test/src/lib.rs:608:18 [INFO] [stdout] 29: 0x561cbce35f57 - test::run_test::run_test_inner::{{closure}}::he9483433cef16afe [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/test/src/lib.rs:500:39 [INFO] [stdout] 30: 0x561cbce0329e - test::run_test::run_test_inner::{{closure}}::h479f1f872a5501ea [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/test/src/lib.rs:527:37 [INFO] [stdout] 31: 0x561cbce0329e - std::sys_common::backtrace::__rust_begin_short_backtrace::h0f1e9b1f279687bc [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stdout] 32: 0x561cbce080c8 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::he5560613c5f5cb83 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/thread/mod.rs:484:17 [INFO] [stdout] 33: 0x561cbce080c8 - as core::ops::function::FnOnce<()>>::call_once::h8190a68cb05ab92f [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 34: 0x561cbce080c8 - std::panicking::try::do_call::h6ae22f5ac22596e4 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:406:40 [INFO] [stdout] 35: 0x561cbce080c8 - std::panicking::try::h2381c25487d6a7c2 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:370:19 [INFO] [stdout] 36: 0x561cbce080c8 - std::panic::catch_unwind::hfe902f4d5c9d7b6d [INFO] [stderr] error: test failed, to rerun pass '--test tests' [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panic.rs:133:14 [INFO] [stdout] 37: 0x561cbce080c8 - std::thread::Builder::spawn_unchecked::{{closure}}::h547fad40771a584e [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/thread/mod.rs:483:30 [INFO] [stdout] 38: 0x561cbce080c8 - core::ops::function::FnOnce::call_once{{vtable.shim}}::he8602a9971738410 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x561cbce61f73 - as core::ops::function::FnOnce>::call_once::he162a5c338a10a39 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 40: 0x561cbce61f73 - as core::ops::function::FnOnce>::call_once::hb27497b21740dd97 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 41: 0x561cbce61f73 - std::sys::unix::thread::Thread::new::thread_start::he467e990e49c5136 [INFO] [stdout] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 42: 0x7f9c2647f609 - start_thread [INFO] [stdout] 43: 0x7f9c26257293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] test_phyloprob_program [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "df01fc8aae13719b93c0f08b96bfad71fa2bd58c0959c8a687880e62ed0709dc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "df01fc8aae13719b93c0f08b96bfad71fa2bd58c0959c8a687880e62ed0709dc", kill_on_drop: false }` [INFO] [stdout] df01fc8aae13719b93c0f08b96bfad71fa2bd58c0959c8a687880e62ed0709dc