[INFO] fetching crate mfqe 0.5.0... [INFO] testing mfqe-0.5.0 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031 [INFO] extracting crate mfqe 0.5.0 into /workspace/builds/worker-11/source [INFO] validating manifest of crates.io crate mfqe 0.5.0 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate mfqe 0.5.0 [INFO] finished tweaking crates.io crate mfqe 0.5.0 [INFO] tweaked toml for crates.io crate mfqe 0.5.0 written to /workspace/builds/worker-11/source/Cargo.toml [INFO] crate crates.io crate mfqe 0.5.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cce9189273a447d43443f40085d7e510f67a505025a6e40b4d0553a40bda360f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "cce9189273a447d43443f40085d7e510f67a505025a6e40b4d0553a40bda360f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cce9189273a447d43443f40085d7e510f67a505025a6e40b4d0553a40bda360f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cce9189273a447d43443f40085d7e510f67a505025a6e40b4d0553a40bda360f", kill_on_drop: false }` [INFO] [stdout] cce9189273a447d43443f40085d7e510f67a505025a6e40b4d0553a40bda360f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e862acea3074f33e7c224011f40dc943cd1ce637382263f99472fcc66ebd16ad [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e862acea3074f33e7c224011f40dc943cd1ce637382263f99472fcc66ebd16ad", kill_on_drop: false }` [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling stable_deref_trait v1.1.1 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling smallvec v0.6.12 [INFO] [stderr] Compiling syn v1.0.7 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling serde v1.0.102 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling unicode-width v0.1.6 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling libc v0.2.65 [INFO] [stderr] Compiling owning_ref v0.4.0 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling parking_lot_core v0.3.1 [INFO] [stderr] Compiling crossbeam-epoch v0.5.2 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling lock_api v0.1.5 [INFO] [stderr] Compiling crossbeam-epoch v0.6.1 [INFO] [stderr] Compiling rand v0.5.6 [INFO] [stderr] Compiling slice-deque v0.1.16 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling flate2 v1.0.12 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling crossbeam-deque v0.5.2 [INFO] [stderr] Compiling buf_redux v0.7.1 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling parking_lot v0.6.4 [INFO] [stderr] Compiling crossbeam-channel v0.2.6 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling crossbeam v0.4.1 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling serde_derive v1.0.102 [INFO] [stderr] Compiling seq_io v0.3.0 [INFO] [stderr] Compiling mfqe v0.5.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 04s [INFO] running `Command { std: "docker" "inspect" "e862acea3074f33e7c224011f40dc943cd1ce637382263f99472fcc66ebd16ad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e862acea3074f33e7c224011f40dc943cd1ce637382263f99472fcc66ebd16ad", kill_on_drop: false }` [INFO] [stdout] e862acea3074f33e7c224011f40dc943cd1ce637382263f99472fcc66ebd16ad [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7a60b6c8b9c74b469eb360481e68d67466c1b523951673fe05f3524dc5bf139e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7a60b6c8b9c74b469eb360481e68d67466c1b523951673fe05f3524dc5bf139e", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v0.1.7 [INFO] [stderr] Compiling getrandom v0.1.13 [INFO] [stderr] Compiling winapi v0.3.8 [INFO] [stderr] Compiling cgmath v0.16.1 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling failure_derive v0.1.6 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling rgb v0.8.14 [INFO] [stderr] Compiling itoa v0.4.4 [INFO] [stderr] Compiling remove_dir_all v0.5.2 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling synstructure v0.12.1 [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling backtrace v0.3.40 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling serde_json v1.0.41 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling tempfile v3.1.0 [INFO] [stderr] Compiling failure v0.1.6 [INFO] [stderr] Compiling winconsole v0.10.0 [INFO] [stderr] Compiling colored v1.8.0 [INFO] [stderr] Compiling assert_cli v0.6.3 [INFO] [stderr] Compiling mfqe v0.5.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:32:18 [INFO] [stdout] | [INFO] [stdout] 32 | \n\ [INFO] [stdout] | __________________^ [INFO] [stdout] 33 | | [INFO] [stdout] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:35:63 [INFO] [stdout] | [INFO] [stdout] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stdout] | _______________________________________________________________^ [INFO] [stdout] 36 | | [INFO] [stdout] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: multiple lines skipped by escaped newline [INFO] [stdout] --> src/main.rs:38:37 [INFO] [stdout] | [INFO] [stdout] 38 | (without comments).\n\ [INFO] [stdout] | _____________________________________^ [INFO] [stdout] 39 | | [INFO] [stdout] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stdout] | |_______________^ skipping everything up to and including this point [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 24.93s [INFO] running `Command { std: "docker" "inspect" "7a60b6c8b9c74b469eb360481e68d67466c1b523951673fe05f3524dc5bf139e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7a60b6c8b9c74b469eb360481e68d67466c1b523951673fe05f3524dc5bf139e", kill_on_drop: false }` [INFO] [stdout] 7a60b6c8b9c74b469eb360481e68d67466c1b523951673fe05f3524dc5bf139e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 653ec2b030c2c0f2efc7a0ffd28b14333cb663ae5a2fcf103fa257eb990ddaf9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "653ec2b030c2c0f2efc7a0ffd28b14333cb663ae5a2fcf103fa257eb990ddaf9", kill_on_drop: false }` [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:32:18 [INFO] [stderr] | [INFO] [stderr] 32 | \n\ [INFO] [stderr] | __________________^ [INFO] [stderr] 33 | | [INFO] [stderr] 34 | | Extract one or more sets of reads from a FASTQ (or \ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:35:63 [INFO] [stderr] | [INFO] [stderr] 35 | FASTA) file by specifying their read names.\n\n\ [INFO] [stderr] | _______________________________________________________________^ [INFO] [stderr] 36 | | [INFO] [stderr] 37 | | Read name files are uncompressed text files with read names \ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: multiple lines skipped by escaped newline [INFO] [stderr] --> src/main.rs:38:37 [INFO] [stderr] | [INFO] [stderr] 38 | (without comments).\n\ [INFO] [stderr] | _____________________________________^ [INFO] [stderr] 39 | | [INFO] [stderr] 40 | | Output is gzip-compressed unless --output-uncompressed is specified, input is uncompressed.\n\ [INFO] [stderr] | |_______________^ skipping everything up to and including this point [INFO] [stderr] [INFO] [stderr] warning: `mfqe` (bin "mfqe" test) generated 3 warnings [INFO] [stderr] warning: `mfqe` (bin "mfqe") generated 3 warnings (3 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/mfqe-ce699277f53aeb17) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/test_cmdline.rs (/opt/rustwide/target/debug/deps/test_cmdline-5ca5d5c523e51b1f) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_fastq_by_stdin ... ok [INFO] [stdout] test tests::test_fasta_by_stdin ... ok [INFO] [stdout] test tests::test_define_sequence_names ... ok [INFO] [stdout] test tests::test_fasta_by_file ... ok [INFO] [stdout] test tests::test_fastq_by_file ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.45s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "653ec2b030c2c0f2efc7a0ffd28b14333cb663ae5a2fcf103fa257eb990ddaf9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "653ec2b030c2c0f2efc7a0ffd28b14333cb663ae5a2fcf103fa257eb990ddaf9", kill_on_drop: false }` [INFO] [stdout] 653ec2b030c2c0f2efc7a0ffd28b14333cb663ae5a2fcf103fa257eb990ddaf9