[INFO] fetching crate libhmmer-sys 0.1.0...
[INFO] testing libhmmer-sys-0.1.0 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031
[INFO] extracting crate libhmmer-sys 0.1.0 into /workspace/builds/worker-8/source
[INFO] validating manifest of crates.io crate libhmmer-sys 0.1.0 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate libhmmer-sys 0.1.0
[INFO] finished tweaking crates.io crate libhmmer-sys 0.1.0
[INFO] tweaked toml for crates.io crate libhmmer-sys 0.1.0 written to /workspace/builds/worker-8/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 5a9ff17a61ad9ca49f48e9ecd3e7df45494211cd8d79b4ce6c076bb9a5f262aa
[INFO] running `Command { std: "docker" "start" "-a" "5a9ff17a61ad9ca49f48e9ecd3e7df45494211cd8d79b4ce6c076bb9a5f262aa", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5a9ff17a61ad9ca49f48e9ecd3e7df45494211cd8d79b4ce6c076bb9a5f262aa", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5a9ff17a61ad9ca49f48e9ecd3e7df45494211cd8d79b4ce6c076bb9a5f262aa", kill_on_drop: false }`
[INFO] [stdout] 5a9ff17a61ad9ca49f48e9ecd3e7df45494211cd8d79b4ce6c076bb9a5f262aa
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] e3c870a719da7ab926d06eadc8087181386930fa745d72d32180900cfef19bbe
[INFO] running `Command { std: "docker" "start" "-a" "e3c870a719da7ab926d06eadc8087181386930fa745d72d32180900cfef19bbe", kill_on_drop: false }`
[INFO] [stderr]    Compiling radium v0.5.3
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling funty v1.1.0
[INFO] [stderr]    Compiling tap v1.0.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.32
[INFO] [stderr]    Compiling wyz v0.2.0
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling bindgen v0.59.1
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling fs_extra v1.2.0
[INFO] [stderr]    Compiling clang-sys v1.3.0
[INFO] [stderr]    Compiling libloading v0.7.2
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling num_cpus v1.13.0
[INFO] [stderr]    Compiling nom v6.2.1
[INFO] [stderr]    Compiling bitvec v0.19.5
[INFO] [stderr]    Compiling quote v1.0.10
[INFO] [stderr]    Compiling regex v1.4.6
[INFO] [stderr]    Compiling env_logger v0.8.4
[INFO] [stderr]    Compiling cexpr v0.5.0
[INFO] [stderr]    Compiling libhmmer-sys v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 05s
[INFO] running `Command { std: "docker" "inspect" "e3c870a719da7ab926d06eadc8087181386930fa745d72d32180900cfef19bbe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e3c870a719da7ab926d06eadc8087181386930fa745d72d32180900cfef19bbe", kill_on_drop: false }`
[INFO] [stdout] e3c870a719da7ab926d06eadc8087181386930fa745d72d32180900cfef19bbe
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8629c1dd2e30ca4a87de408f5dd1be8d368fa0347fbacba36a4c4c6737ea5df8
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "8629c1dd2e30ca4a87de408f5dd1be8d368fa0347fbacba36a4c4c6737ea5df8", kill_on_drop: false }`
[INFO] [stderr]    Compiling libhmmer-sys v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 4.17s
[INFO] running `Command { std: "docker" "inspect" "8629c1dd2e30ca4a87de408f5dd1be8d368fa0347fbacba36a4c4c6737ea5df8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8629c1dd2e30ca4a87de408f5dd1be8d368fa0347fbacba36a4c4c6737ea5df8", kill_on_drop: false }`
[INFO] [stdout] 8629c1dd2e30ca4a87de408f5dd1be8d368fa0347fbacba36a4c4c6737ea5df8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b94aca9a6ba80f7db92965a77be4b7840ba904f38f0920998ca3fb57651a1f0c
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b94aca9a6ba80f7db92965a77be4b7840ba904f38f0920998ca3fb57651a1f0c", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/libhmmer_sys-53aa5f20ef73cc57)
[INFO] [stdout] 
[INFO] [stdout] running 67 tests
[INFO] [stdout] test bindgen_test_layout_ESL_ALPHABET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_FILEPARSER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_GETOPTS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_KEYHASH ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE_FMTDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_OPTIONS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PERMUTATION ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RANDOMNESS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SCOREMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_STOPWATCH ... ok
[INFO] [stdout] test bindgen_test_layout_FM_CFG ... ok
[INFO] [stdout] test bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_internal_list ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_mutex_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqascii_s ... ok
[INFO] [stdout] test bindgen_test_layout___va_list_tag ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqio_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_data_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQDATA ... ok
[INFO] [stdout] test bindgen_test_layout_fm_ambiglist_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_interval_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_metadata_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_NEWSSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RAND64 ... ok
[INFO] [stdout] test bindgen_test_layout_P7_OM_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hit_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_gmx_s ... ok
[INFO] [stderr]    Doc-tests libhmmer-sys
[INFO] [stdout] test bindgen_test_layout_ESL_BUFFER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_DMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_vol_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BITFIELD ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqcache_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_domaindef_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_oprofile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_omx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_pipeline_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_seqdata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_dom_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_alidisplay_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_bg_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_builder_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmmfile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_prior_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_list_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_profile_s ... ok
[INFO] [stdout] test bindgen_test_layout_tms ... ok
[INFO] [stdout] test bindgen_test_layout_pthread_mutex_t ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MIXDCHLET ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spcoord_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s__bindgen_ty_1 ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spensemble_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_tophits_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_trace_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HISTOGRAM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSA ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 67 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "b94aca9a6ba80f7db92965a77be4b7840ba904f38f0920998ca3fb57651a1f0c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b94aca9a6ba80f7db92965a77be4b7840ba904f38f0920998ca3fb57651a1f0c", kill_on_drop: false }`
[INFO] [stdout] b94aca9a6ba80f7db92965a77be4b7840ba904f38f0920998ca3fb57651a1f0c