[INFO] fetching crate hdf5-sys 0.8.0... [INFO] testing hdf5-sys-0.8.0 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031 [INFO] extracting crate hdf5-sys 0.8.0 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate hdf5-sys 0.8.0 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-sys 0.8.0 [INFO] finished tweaking crates.io crate hdf5-sys 0.8.0 [INFO] tweaked toml for crates.io crate hdf5-sys 0.8.0 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 590ffaa88eb3bc9fcdb08e5f988850e57fce1165dfad22a57108c18ad9151144 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "590ffaa88eb3bc9fcdb08e5f988850e57fce1165dfad22a57108c18ad9151144", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "590ffaa88eb3bc9fcdb08e5f988850e57fce1165dfad22a57108c18ad9151144", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "590ffaa88eb3bc9fcdb08e5f988850e57fce1165dfad22a57108c18ad9151144", kill_on_drop: false }` [INFO] [stdout] 590ffaa88eb3bc9fcdb08e5f988850e57fce1165dfad22a57108c18ad9151144 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] cd02262b162c6d2b0fa23284d6f63e6ed2a90dbb3a7ff73b3ef03c5f5893ecdb [INFO] running `Command { std: "docker" "start" "-a" "cd02262b162c6d2b0fa23284d6f63e6ed2a90dbb3a7ff73b3ef03c5f5893ecdb", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling libc v0.2.107 [INFO] [stderr] Compiling pkg-config v0.3.22 [INFO] [stderr] Compiling libloading v0.7.2 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling hdf5-sys v0.8.0 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.8.0 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-c389751d81df089d/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', build.rs:548:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55ce85a293ac - std::backtrace_rs::backtrace::libunwind::trace::h7630ba4cba718aa0 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x55ce85a293ac - std::backtrace_rs::backtrace::trace_unsynchronized::he7498e79c157f5ac [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55ce85a293ac - std::sys_common::backtrace::_print_fmt::hdaebadaee17bca49 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55ce85a293ac - ::fmt::h82b0e3aaf8a96140 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55ce85a4807c - core::fmt::write::h72801a82c94e6ff1 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/fmt/mod.rs:1149:17 [INFO] [stderr] 5: 0x55ce85a25b75 - std::io::Write::write_fmt::hc2da38dc44811df8 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/io/mod.rs:1697:15 [INFO] [stderr] 6: 0x55ce85a2ad20 - std::sys_common::backtrace::_print::h1c9a1d19c48821c1 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55ce85a2ad20 - std::sys_common::backtrace::print::h7ce8802039fa9d0e [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55ce85a2ad20 - std::panicking::default_hook::{{closure}}::hb2a74a8c1499c326 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:211:50 [INFO] [stderr] 9: 0x55ce85a2a8cb - std::panicking::default_hook::hf4f180b00076f2b2 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:228:9 [INFO] [stderr] 10: 0x55ce85a2b3d4 - std::panicking::rust_panic_with_hook::he85ce8435493b711 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:606:17 [INFO] [stderr] 11: 0x55ce85965632 - std::panicking::begin_panic::{{closure}}::h493f32395bacc3be [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:526:9 [INFO] [stderr] 12: 0x55ce85961fb9 - std::sys_common::backtrace::__rust_end_short_backtrace::he15d006531776f03 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stderr] 13: 0x55ce85965573 - std::panicking::begin_panic::h57ef656f56141f87 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:525:12 [INFO] [stderr] 14: 0x55ce8581ea97 - build_script_build::LibrarySearcher::try_locate_hdf5_library::hcae8bac860d75558 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:548:13 [INFO] [stderr] 15: 0x55ce85820237 - build_script_build::main::hd164ea76672c56e2 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:646:9 [INFO] [stderr] 16: 0x55ce85823b5b - core::ops::function::FnOnce::call_once::h796fe5a47f27aa92 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55ce8582c83e - std::sys_common::backtrace::__rust_begin_short_backtrace::hfeb27bb7fcc00edf [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stderr] 18: 0x55ce8582c8d1 - std::rt::lang_start::{{closure}}::h9b87051445cb350f [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/rt.rs:145:18 [INFO] [stderr] 19: 0x55ce85a28bf1 - core::ops::function::impls:: for &F>::call_once::h0e73392810ecd318 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55ce85a28bf1 - std::panicking::try::do_call::h12dcb4a4f352a507 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:406:40 [INFO] [stderr] 21: 0x55ce85a28bf1 - std::panicking::try::h0d978c76ab4a3863 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:370:19 [INFO] [stderr] 22: 0x55ce85a28bf1 - std::panic::catch_unwind::hab40227675186980 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panic.rs:133:14 [INFO] [stderr] 23: 0x55ce85a28bf1 - std::rt::lang_start_internal::{{closure}}::hc34786299e7d2cf7 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/rt.rs:128:48 [INFO] [stderr] 24: 0x55ce85a28bf1 - std::panicking::try::do_call::h38e7a9128f21d387 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:406:40 [INFO] [stderr] 25: 0x55ce85a28bf1 - std::panicking::try::h32d4e72fd8922bce [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panicking.rs:370:19 [INFO] [stderr] 26: 0x55ce85a28bf1 - std::panic::catch_unwind::h9a345671d889d41f [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/panic.rs:133:14 [INFO] [stderr] 27: 0x55ce85a28bf1 - std::rt::lang_start_internal::h9e691a4f557eb2a3 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/rt.rs:128:20 [INFO] [stderr] 28: 0x55ce8582c8a0 - std::rt::lang_start::h4ea4d7add1450681 [INFO] [stderr] at /rustc/a77da2d454e6caa227a85b16410b95f93495e7e0/library/std/src/rt.rs:144:17 [INFO] [stderr] 29: 0x55ce858216dc - main [INFO] [stderr] 30: 0x7f229553f0b3 - __libc_start_main [INFO] [stderr] 31: 0x55ce85819d9e - _start [INFO] [stderr] 32: 0x0 - [INFO] running `Command { std: "docker" "inspect" "cd02262b162c6d2b0fa23284d6f63e6ed2a90dbb3a7ff73b3ef03c5f5893ecdb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cd02262b162c6d2b0fa23284d6f63e6ed2a90dbb3a7ff73b3ef03c5f5893ecdb", kill_on_drop: false }` [INFO] [stdout] cd02262b162c6d2b0fa23284d6f63e6ed2a90dbb3a7ff73b3ef03c5f5893ecdb