[INFO] fetching crate genome-graph 0.4.9... [INFO] testing genome-graph-0.4.9 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031 [INFO] extracting crate genome-graph 0.4.9 into /workspace/builds/worker-101/source [INFO] validating manifest of crates.io crate genome-graph 0.4.9 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate genome-graph 0.4.9 [INFO] finished tweaking crates.io crate genome-graph 0.4.9 [INFO] tweaked toml for crates.io crate genome-graph 0.4.9 written to /workspace/builds/worker-101/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] fed297d6b8f3a05a0d32017638bfe4f0705142277eff512d73fb35a841332174 [INFO] running `Command { std: "docker" "start" "-a" "fed297d6b8f3a05a0d32017638bfe4f0705142277eff512d73fb35a841332174", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "fed297d6b8f3a05a0d32017638bfe4f0705142277eff512d73fb35a841332174", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fed297d6b8f3a05a0d32017638bfe4f0705142277eff512d73fb35a841332174", kill_on_drop: false }` [INFO] [stdout] fed297d6b8f3a05a0d32017638bfe4f0705142277eff512d73fb35a841332174 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1191a552919884a5e3d3f6e94bd715c07004b182a976dc446ce5804b514baa3e [INFO] running `Command { std: "docker" "start" "-a" "1191a552919884a5e3d3f6e94bd715c07004b182a976dc446ce5804b514baa3e", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.81 [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.15 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling rustversion v1.0.5 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling typenum v1.14.0 [INFO] [stderr] Compiling paste v1.0.6 [INFO] [stderr] Compiling fixedbitset v0.2.0 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling radium v0.6.2 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling ref-cast v1.0.6 [INFO] [stderr] Compiling tap v1.0.1 [INFO] [stderr] Compiling gimli v0.26.1 [INFO] [stderr] Compiling anyhow v1.0.47 [INFO] [stderr] Compiling traitsequence v0.4.2 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling bio v0.37.1 [INFO] [stderr] Compiling bitvector v0.1.5 [INFO] [stderr] Compiling rustc-demangle v0.1.21 [INFO] [stderr] Compiling strum v0.15.0 [INFO] [stderr] Compiling funty v1.2.0 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling strum v0.21.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling opaque_typedef v0.0.5 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling object v0.27.1 [INFO] [stderr] Compiling wyz v0.4.0 [INFO] [stderr] Compiling itertools v0.10.1 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling backtrace v0.3.63 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling bitvec v0.22.3 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling approx v0.5.0 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling ndarray v0.15.3 [INFO] [stderr] Compiling traitgraph v0.4.10 [INFO] [stderr] Compiling rand_distr v0.4.2 [INFO] [stderr] Compiling addr2line v0.17.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.23.0 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling ref-cast-impl v1.0.6 [INFO] [stderr] Compiling getset v0.1.1 [INFO] [stderr] Compiling strum_macros v0.21.1 [INFO] [stderr] Compiling strum_macros v0.15.0 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling compact-genome v0.4.10 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling opaque_typedef_macros v0.0.5 [INFO] [stderr] Compiling bigraph v0.4.5 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling genome-graph v0.4.9 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 11s [INFO] running `Command { std: "docker" "inspect" "1191a552919884a5e3d3f6e94bd715c07004b182a976dc446ce5804b514baa3e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1191a552919884a5e3d3f6e94bd715c07004b182a976dc446ce5804b514baa3e", kill_on_drop: false }` [INFO] [stdout] 1191a552919884a5e3d3f6e94bd715c07004b182a976dc446ce5804b514baa3e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 828708d8054d39f8c1cc48cc9235fb16b7b3b3f6e4f3d1791c7b09ff260e3780 [INFO] running `Command { std: "docker" "start" "-a" "828708d8054d39f8c1cc48cc9235fb16b7b3b3f6e4f3d1791c7b09ff260e3780", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling genome-graph v0.4.9 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1m 04s [INFO] running `Command { std: "docker" "inspect" "828708d8054d39f8c1cc48cc9235fb16b7b3b3f6e4f3d1791c7b09ff260e3780", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "828708d8054d39f8c1cc48cc9235fb16b7b3b3f6e4f3d1791c7b09ff260e3780", kill_on_drop: false }` [INFO] [stdout] 828708d8054d39f8c1cc48cc9235fb16b7b3b3f6e4f3d1791c7b09ff260e3780 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-101/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7a6f7e5327bf9e8bdb3cb18b8ec4d55a5ac6fe092abe3ea79a8ceefc3eea6b13 [INFO] running `Command { std: "docker" "start" "-a" "7a6f7e5327bf9e8bdb3cb18b8ec4d55a5ac6fe092abe3ea79a8ceefc3eea6b13", kill_on_drop: false }` [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.23s [INFO] [stdout] running 10 tests [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/genome_graph-154c29664cb26336) [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_all_loops ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_forward_merge ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_multigraph ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_and_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_self_loops ... ok [INFO] [stdout] test io::gfa::tests::test_read_gfa_as_edge_centric_bigraph_simple ... ok [INFO] [stdout] test io::bcalm2::tests::test_node_read_write ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests genome-graph [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "7a6f7e5327bf9e8bdb3cb18b8ec4d55a5ac6fe092abe3ea79a8ceefc3eea6b13", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7a6f7e5327bf9e8bdb3cb18b8ec4d55a5ac6fe092abe3ea79a8ceefc3eea6b13", kill_on_drop: false }` [INFO] [stdout] 7a6f7e5327bf9e8bdb3cb18b8ec4d55a5ac6fe092abe3ea79a8ceefc3eea6b13