[INFO] fetching crate biofile 1.10.3... [INFO] testing biofile-1.10.3 against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031 [INFO] extracting crate biofile 1.10.3 into /workspace/builds/worker-72/source [INFO] validating manifest of crates.io crate biofile 1.10.3 on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate biofile 1.10.3 [INFO] finished tweaking crates.io crate biofile 1.10.3 [INFO] tweaked toml for crates.io crate biofile 1.10.3 written to /workspace/builds/worker-72/source/Cargo.toml [INFO] crate crates.io crate biofile 1.10.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded remove_dir_all v0.5.2 [INFO] [stderr] Downloaded num-rational v0.2.2 [INFO] [stderr] Downloaded num v0.2.0 [INFO] [stderr] Downloaded hermit-abi v0.1.17 [INFO] [stderr] Downloaded rayon v1.2.0 [INFO] [stderr] Downloaded num-integer v0.1.41 [INFO] [stderr] Downloaded rand v0.7.2 [INFO] [stderr] Downloaded num-complex v0.2.3 [INFO] [stderr] Downloaded num-iter v0.1.39 [INFO] [stderr] Downloaded bitflags v1.2.0 [INFO] [stderr] Downloaded autocfg v0.1.6 [INFO] [stderr] Downloaded num-bigint v0.2.3 [INFO] [stderr] Downloaded num-traits v0.2.8 [INFO] [stderr] Downloaded rayon-core v1.6.0 [INFO] [stderr] Downloaded nodrop v0.1.13 [INFO] [stderr] Downloaded ppv-lite86 v0.2.5 [INFO] [stderr] Downloaded arrayvec v0.4.11 [INFO] [stderr] Downloaded libc v0.2.62 [INFO] [stderr] Downloaded c2-chacha v0.2.2 [INFO] [stderr] Downloaded getrandom v0.1.12 [INFO] [stderr] Downloaded wasi v0.7.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c2d3258bf51d0da08a749bd4b94d001489778985cecc1ae6e51a069b5ff8c51c [INFO] running `Command { std: "docker" "start" "-a" "c2d3258bf51d0da08a749bd4b94d001489778985cecc1ae6e51a069b5ff8c51c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c2d3258bf51d0da08a749bd4b94d001489778985cecc1ae6e51a069b5ff8c51c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c2d3258bf51d0da08a749bd4b94d001489778985cecc1ae6e51a069b5ff8c51c", kill_on_drop: false }` [INFO] [stdout] c2d3258bf51d0da08a749bd4b94d001489778985cecc1ae6e51a069b5ff8c51c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 564b2d8af4fd6b4fb6e14eb0a86a023cd438314b6ea5de902669eff231f7265c [INFO] running `Command { std: "docker" "start" "-a" "564b2d8af4fd6b4fb6e14eb0a86a023cd438314b6ea5de902669eff231f7265c", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v0.1.6 [INFO] [stderr] Compiling libc v0.2.62 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling arrayvec v0.4.11 [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling nodrop v0.1.13 [INFO] [stderr] Compiling scopeguard v1.0.0 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling bitflags v1.2.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.5 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling c2-chacha v0.2.2 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling num-bigint v0.2.3 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-iter v0.1.39 [INFO] [stderr] Compiling num-rational v0.2.2 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling memoffset v0.5.1 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling crossbeam-epoch v0.7.2 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling crossbeam-deque v0.7.1 [INFO] [stderr] Compiling rayon v1.2.0 [INFO] [stderr] Compiling num v0.2.0 [INFO] [stderr] Compiling program-flow v0.1.3 [INFO] [stderr] Compiling math v0.10.0 [INFO] [stderr] Compiling biofile v1.10.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stdout] --> src/lib.rs:1:12 [INFO] [stdout] | [INFO] [stdout] 1 | #![feature(bufreader_seek_relative)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(stable_features)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/peak_file.rs:132:33 [INFO] [stdout] | [INFO] [stdout] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | / format!( [INFO] [stdout] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | | num_snps, [INFO] [stdout] 20 | | bytes.len() * 4 [INFO] [stdout] 21 | | ) [INFO] [stdout] | |_____________^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 17 ~ [INFO] [stdout] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | num_snps, [INFO] [stdout] 20 | bytes.len() * 4 [INFO] [stdout] 21 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 11.57s [INFO] running `Command { std: "docker" "inspect" "564b2d8af4fd6b4fb6e14eb0a86a023cd438314b6ea5de902669eff231f7265c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "564b2d8af4fd6b4fb6e14eb0a86a023cd438314b6ea5de902669eff231f7265c", kill_on_drop: false }` [INFO] [stdout] 564b2d8af4fd6b4fb6e14eb0a86a023cd438314b6ea5de902669eff231f7265c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6e1b648c6471e25223e472219389ed06204765d0ea88099cf55a2b8670c35d24 [INFO] running `Command { std: "docker" "start" "-a" "6e1b648c6471e25223e472219389ed06204765d0ea88099cf55a2b8670c35d24", kill_on_drop: false }` [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling remove_dir_all v0.5.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stdout] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stdout] --> src/lib.rs:1:12 [INFO] [stdout] | [INFO] [stdout] 1 | #![feature(bufreader_seek_relative)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(stable_features)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/peak_file.rs:132:33 [INFO] [stdout] | [INFO] [stdout] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | / format!( [INFO] [stdout] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | | num_snps, [INFO] [stdout] 20 | | bytes.len() * 4 [INFO] [stdout] 21 | | ) [INFO] [stdout] | |_____________^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 17 ~ [INFO] [stdout] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | num_snps, [INFO] [stdout] 20 | bytes.len() * 4 [INFO] [stdout] 21 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling tempfile v3.1.0 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling rand_jitter v0.1.4 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling ndarray-rand v0.9.0 [INFO] [stderr] Compiling biofile v1.10.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bed.rs:282:17 [INFO] [stdout] | [INFO] [stdout] 282 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bed.rs:326:17 [INFO] [stdout] | [INFO] [stdout] 326 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stdout] --> src/bedgraph.rs:196:13 [INFO] [stdout] | [INFO] [stdout] 196 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stdout] | [INFO] [stdout] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stdout] = note: for more information, see [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 55 | test_data_line!("chr1", 2, 10, None::); [INFO] [stdout] | ------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 56 | test_data_line!("chrX", 200, 201, Some(19i32)); [INFO] [stdout] | ---------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `val` [INFO] [stdout] --> src/traits/trait_impl.rs:45:41 [INFO] [stdout] | [INFO] [stdout] 45 | let (chrom, start, end, val) = [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stdout] ... [INFO] [stdout] 57 | test_data_line!("chrY", 100, 4000, Some(-2i32)); [INFO] [stdout] | ----------------------------------------------- in this macro invocation [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stdout] --> src/lib.rs:1:12 [INFO] [stdout] | [INFO] [stdout] 1 | #![feature(bufreader_seek_relative)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(stable_features)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/peak_file.rs:132:33 [INFO] [stdout] | [INFO] [stdout] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stdout] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stdout] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: panic message is not a string literal [INFO] [stdout] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | / format!( [INFO] [stdout] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | | num_snps, [INFO] [stdout] 20 | | bytes.len() * 4 [INFO] [stdout] 21 | | ) [INFO] [stdout] | |_____________^ [INFO] [stdout] | [INFO] [stdout] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stdout] = note: for more information, see [INFO] [stdout] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stdout] help: remove the `format!(..)` macro call [INFO] [stdout] | [INFO] [stdout] 17 ~ [INFO] [stdout] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stdout] 19 | num_snps, [INFO] [stdout] 20 | bytes.len() * 4 [INFO] [stdout] 21 ~ [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 5.72s [INFO] running `Command { std: "docker" "inspect" "6e1b648c6471e25223e472219389ed06204765d0ea88099cf55a2b8670c35d24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6e1b648c6471e25223e472219389ed06204765d0ea88099cf55a2b8670c35d24", kill_on_drop: false }` [INFO] [stdout] 6e1b648c6471e25223e472219389ed06204765d0ea88099cf55a2b8670c35d24 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-72/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 8c005041a549d7849ca9a5ccbbca2a954fcb09f39f2438a26858e29df43899aa [INFO] running `Command { std: "docker" "start" "-a" "8c005041a549d7849ca9a5ccbbca2a954fcb09f39f2438a26858e29df43899aa", kill_on_drop: false }` [INFO] [stderr] warning: the feature `bufreader_seek_relative` has been stable since 1.53.0 and no longer requires an attribute to enable [INFO] [stderr] --> src/lib.rs:1:12 [INFO] [stderr] | [INFO] [stderr] 1 | #![feature(bufreader_seek_relative)] [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(stable_features)]` on by default [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/peak_file.rs:132:33 [INFO] [stderr] | [INFO] [stderr] 132 | s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_fmt_panics)]` on by default [INFO] [stderr] = note: this usage of panic!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the panic!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 132 - s => panic!(format!("unrecognized strand symbol {}", s)), [INFO] [stderr] 132 + s => panic!("unrecognized strand symbol {}", s), [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: panic message is not a string literal [INFO] [stderr] --> src/plink_bed/plink_snps.rs:17:13 [INFO] [stderr] | [INFO] [stderr] 17 | / format!( [INFO] [stderr] 18 | | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stderr] 19 | | num_snps, [INFO] [stderr] 20 | | bytes.len() * 4 [INFO] [stderr] 21 | | ) [INFO] [stderr] | |_____________^ [INFO] [stderr] | [INFO] [stderr] = note: this usage of assert!() is deprecated; it will be a hard error in Rust 2021 [INFO] [stderr] = note: for more information, see [INFO] [stderr] = note: the assert!() macro supports formatting, so there's no need for the format!() macro here [INFO] [stderr] help: remove the `format!(..)` macro call [INFO] [stderr] | [INFO] [stderr] 17 ~ [INFO] [stderr] 18 | "num_snps ({}) > bytes.len() * 4 = {}", [INFO] [stderr] 19 | num_snps, [INFO] [stderr] 20 | bytes.len() * 4 [INFO] [stderr] 21 ~ [INFO] [stderr] | [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bed.rs:282:17 [INFO] [stderr] | [INFO] [stderr] 282 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bed.rs:326:17 [INFO] [stderr] | [INFO] [stderr] 326 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bedgraph.rs:196:13 [INFO] [stderr] | [INFO] [stderr] 196 | ToChromIntervalValueIter::get_chrom_to_interval_to_val( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `` [INFO] [stderr] | [INFO] [stderr] = warning: this is accepted in the current edition (Rust 2018) but is a hard error in Rust 2021! [INFO] [stderr] = note: for more information, see [INFO] [stderr] [INFO] [stderr] warning: unused variable: `val` [INFO] [stderr] --> src/traits/trait_impl.rs:45:41 [INFO] [stderr] | [INFO] [stderr] 45 | let (chrom, start, end, val) = [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stderr] ... [INFO] [stderr] 55 | test_data_line!("chr1", 2, 10, None::); [INFO] [stderr] | ------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused variable: `val` [INFO] [stderr] --> src/traits/trait_impl.rs:45:41 [INFO] [stderr] | [INFO] [stderr] 45 | let (chrom, start, end, val) = [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stderr] ... [INFO] [stderr] 56 | test_data_line!("chrX", 200, 201, Some(19i32)); [INFO] [stderr] | ---------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused variable: `val` [INFO] [stderr] --> src/traits/trait_impl.rs:45:41 [INFO] [stderr] | [INFO] [stderr] 45 | let (chrom, start, end, val) = [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_val` [INFO] [stderr] ... [INFO] [stderr] 57 | test_data_line!("chrY", 100, 4000, Some(-2i32)); [INFO] [stderr] | ----------------------------------------------- in this macro invocation [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in the macro `test_data_line` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: `biofile` (lib) generated 3 warnings [INFO] [stderr] warning: `biofile` (lib test) generated 9 warnings (3 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.06s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/biofile-d2594958414b93a5) [INFO] [stdout] [INFO] [stdout] running 28 tests [INFO] [stdout] test bed::paired_end_collator::tests::test_get_valid_strands ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_is_overlapping ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_min_max_coordinates ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_pair_distance_covered ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_paired_midpoint ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_valid_strands ... ok [INFO] [stdout] test bed::tests::test_bed_to_chrom_interval_value_iter ... ok [INFO] [stdout] test bedgraph::tests::test_bedgraph_to_chrom_interval_value_iter ... ok [INFO] [stdout] test bed::bed_writer::tests::test_bed_writer ... ok [INFO] [stdout] test bed::bed_writer::tests::test_write_bedgraph ... ok [INFO] [stdout] test bed::tests::test_get_chrom_to_intervals ... ok [INFO] [stdout] test bed::tests::test_get_chrom_to_interval_to_val ... ok [INFO] [stdout] test peak_file::tests::test_get_chrom_to_interval_to_val ... ok [INFO] [stdout] test plink_bed::plink_snps::tests::test_plink_snps ... ok [INFO] [stdout] test plink_bed::plink_snps::tests::test_plink_snps_from_geno ... ok [INFO] [stdout] test bedgraph::tests::test_get_chrom_to_interval_to_val ... ok [INFO] [stdout] test peak_file::tests::test_get_chrom_to_peaks ... ok [INFO] [stdout] test bed::paired_end_collator::tests::test_collator ... ok [INFO] [stdout] test plink_bim::tests::test_fileline_partitions_iter ... ok [INFO] [stdout] test plink_bim::tests::test_get_all_chroms ... ok [INFO] [stdout] test traits::trait_impl::tests::test_bed_data_line_to_chorm_start_end_val ... ok [INFO] [stdout] test plink_bed::tests::test_convert_to_dominance_representation ... ok [INFO] [stdout] test plink_bim::tests::test_get_chrom_to_positions ... ok [INFO] [stdout] test plink_bim::tests::test_get_fileline_partitions ... ok [INFO] [stdout] test plink_bed::tests::test_chunk_iter ... ok [INFO] [stdout] test plink_bed::tests::test_multiple_bfiles ... ok [INFO] [stdout] test plink_bed::tests::test_create_dominance_geno_bed ... ok [INFO] [stdout] test plink_bed::tests::test_create_bed ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 28 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.09s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/collate_paired_end-14593ab45a2169e4) [INFO] [stdout] [INFO] [stderr] Doc-tests biofile [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "8c005041a549d7849ca9a5ccbbca2a954fcb09f39f2438a26858e29df43899aa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8c005041a549d7849ca9a5ccbbca2a954fcb09f39f2438a26858e29df43899aa", kill_on_drop: false }` [INFO] [stdout] 8c005041a549d7849ca9a5ccbbca2a954fcb09f39f2438a26858e29df43899aa