[INFO] cloning repository https://github.com/wtzhang23/bamgen
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wtzhang23/bamgen" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3d59832e20c0d9c88e0ea1a9b5a2cc5edb044927
[INFO] testing wtzhang23/bamgen against master#a77da2d454e6caa227a85b16410b95f93495e7e0 for pr-91031
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwtzhang23%2Fbamgen" "/workspace/builds/worker-0/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/wtzhang23/bamgen on toolchain a77da2d454e6caa227a85b16410b95f93495e7e0
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/wtzhang23/bamgen
[INFO] finished tweaking git repo https://github.com/wtzhang23/bamgen
[INFO] tweaked toml for git repo https://github.com/wtzhang23/bamgen written to /workspace/builds/worker-0/source/Cargo.toml
[INFO] crate git repo https://github.com/wtzhang23/bamgen already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9807fb40423dac82c7012ed2c72dfc651dbca27bdc1a3b95f373cb3af390eaae
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "9807fb40423dac82c7012ed2c72dfc651dbca27bdc1a3b95f373cb3af390eaae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9807fb40423dac82c7012ed2c72dfc651dbca27bdc1a3b95f373cb3af390eaae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9807fb40423dac82c7012ed2c72dfc651dbca27bdc1a3b95f373cb3af390eaae", kill_on_drop: false }`
[INFO] [stdout] 9807fb40423dac82c7012ed2c72dfc651dbca27bdc1a3b95f373cb3af390eaae
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f0f14d37afe073482ea1f4d225251bd96c421eb6440c991cbd053b05cda7f206
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "f0f14d37afe073482ea1f4d225251bd96c421eb6440c991cbd053b05cda7f206", kill_on_drop: false }`
[INFO] [stderr]    Compiling pkg-config v0.3.18
[INFO] [stderr]    Compiling syn v1.0.42
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]    Compiling os_str_bytes v2.3.2
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling indexmap v1.6.0
[INFO] [stderr]    Compiling jobserver v0.1.21
[INFO] [stderr]    Compiling getrandom v0.1.15
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling cc v1.0.60
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling url v2.1.1
[INFO] [stderr]    Compiling openssl-src v111.11.0+1.1.1h
[INFO] [stderr]    Compiling openssl-sys v0.9.58
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling hts-sys v1.10.3
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling serde_derive v1.0.116
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling clap_derive v3.0.0-beta.2
[INFO] [stderr]    Compiling thiserror v1.0.20
[INFO] [stderr]    Compiling clap v3.0.0-beta.2
[INFO] [stderr]    Compiling serde v1.0.116
[INFO] [stderr]    Compiling bio-types v0.7.0
[INFO] [stderr]    Compiling ron v0.6.2
[INFO] [stderr]    Compiling rust-htslib v0.32.0
[INFO] [stderr]    Compiling bamgen v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 4m 02s
[INFO] running `Command { std: "docker" "inspect" "f0f14d37afe073482ea1f4d225251bd96c421eb6440c991cbd053b05cda7f206", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f0f14d37afe073482ea1f4d225251bd96c421eb6440c991cbd053b05cda7f206", kill_on_drop: false }`
[INFO] [stdout] f0f14d37afe073482ea1f4d225251bd96c421eb6440c991cbd053b05cda7f206
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1325b0fa6f0f5698a75871f0a907480b5d527070e5a0e2b22d8611d7487a4055
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "1325b0fa6f0f5698a75871f0a907480b5d527070e5a0e2b22d8611d7487a4055", kill_on_drop: false }`
[INFO] [stderr]    Compiling bamgen v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.44s
[INFO] running `Command { std: "docker" "inspect" "1325b0fa6f0f5698a75871f0a907480b5d527070e5a0e2b22d8611d7487a4055", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1325b0fa6f0f5698a75871f0a907480b5d527070e5a0e2b22d8611d7487a4055", kill_on_drop: false }`
[INFO] [stdout] 1325b0fa6f0f5698a75871f0a907480b5d527070e5a0e2b22d8611d7487a4055
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+a77da2d454e6caa227a85b16410b95f93495e7e0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 9b0c0b31e22f150a5dc5a3a38c5dbfb886b253052330aa711793185d088a11be
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "9b0c0b31e22f150a5dc5a3a38c5dbfb886b253052330aa711793185d088a11be", kill_on_drop: false }`
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stdout] running 0 tests
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/bamgen-67a4529af10f681f)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "9b0c0b31e22f150a5dc5a3a38c5dbfb886b253052330aa711793185d088a11be", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9b0c0b31e22f150a5dc5a3a38c5dbfb886b253052330aa711793185d088a11be", kill_on_drop: false }`
[INFO] [stdout] 9b0c0b31e22f150a5dc5a3a38c5dbfb886b253052330aa711793185d088a11be