[INFO] fetching crate rust-htslib 0.38.2... [INFO] testing rust-htslib-0.38.2 against try#8262275854dc0e5381c9d42d56257d94932c5a87 for pr-90799 [INFO] extracting crate rust-htslib 0.38.2 into /workspace/builds/worker-8/source [INFO] validating manifest of crates.io crate rust-htslib 0.38.2 on toolchain 8262275854dc0e5381c9d42d56257d94932c5a87 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-8/source/.cargo/config [INFO] started tweaking crates.io crate rust-htslib 0.38.2 [INFO] finished tweaking crates.io crate rust-htslib 0.38.2 [INFO] tweaked toml for crates.io crate rust-htslib 0.38.2 written to /workspace/builds/worker-8/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bio-types v0.12.1 [INFO] [stderr] Downloaded libdeflate-sys v0.5.0 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded hts-sys v2.0.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 77d3bed566feea37e79e85a56e4a785526868f38097167659c1d38baf06a6c20 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "77d3bed566feea37e79e85a56e4a785526868f38097167659c1d38baf06a6c20", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "77d3bed566feea37e79e85a56e4a785526868f38097167659c1d38baf06a6c20", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "77d3bed566feea37e79e85a56e4a785526868f38097167659c1d38baf06a6c20", kill_on_drop: false }` [INFO] [stdout] 77d3bed566feea37e79e85a56e4a785526868f38097167659c1d38baf06a6c20 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 696756612eb973614c6fc65dc93fd6ec64fd03aeb689acdb7d92e07489dba994 [INFO] running `Command { std: "docker" "start" "-a" "696756612eb973614c6fc65dc93fd6ec64fd03aeb689acdb7d92e07489dba994", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling pkg-config v0.3.22 [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.82 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling tinyvec_macros v0.1.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustversion v1.0.5 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling matches v0.1.9 [INFO] [stderr] Compiling unicode-bidi v0.3.7 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling tinyvec v1.5.1 [INFO] [stderr] Compiling form_urlencoded v1.0.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Compiling unicode-normalization v0.1.19 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling openssl-src v300.0.2+3.0.0 [INFO] [stderr] Compiling cmake v0.1.46 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling openssl-sys v0.9.71 [INFO] [stderr] Compiling curl-sys v0.4.51+curl-7.80.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Compiling idna v0.2.3 [INFO] [stderr] Compiling url v2.2.2 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling rust-htslib v0.38.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: field is never read: `buffer` [INFO] [stdout] --> src/bcf/record.rs:133:5 [INFO] [stdout] | [INFO] [stdout] 133 | buffer: B, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `hts_format` [INFO] [stdout] --> src/tbx/mod.rs:94:5 [INFO] [stdout] | [INFO] [stdout] 94 | hts_format: htslib::htsExactFormat, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 48s [INFO] running `Command { std: "docker" "inspect" "696756612eb973614c6fc65dc93fd6ec64fd03aeb689acdb7d92e07489dba994", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "696756612eb973614c6fc65dc93fd6ec64fd03aeb689acdb7d92e07489dba994", kill_on_drop: false }` [INFO] [stdout] 696756612eb973614c6fc65dc93fd6ec64fd03aeb689acdb7d92e07489dba994 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9830700c908b145ddab61160687d813d36e9d4144c8f53c3fc18c7665fe678a4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9830700c908b145ddab61160687d813d36e9d4144c8f53c3fc18c7665fe678a4", kill_on_drop: false }` [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling ryu v1.0.6 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stdout] warning: field is never read: `buffer` [INFO] [stdout] --> src/bcf/record.rs:133:5 [INFO] [stdout] | [INFO] [stdout] 133 | buffer: B, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `hts_format` [INFO] [stdout] --> src/tbx/mod.rs:94:5 [INFO] [stdout] | [INFO] [stdout] 94 | hts_format: htslib::htsExactFormat, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling pretty_assertions v0.6.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Compiling rust-htslib v0.38.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: field is never read: `buffer` [INFO] [stdout] --> src/bcf/record.rs:133:5 [INFO] [stdout] | [INFO] [stdout] 133 | buffer: B, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `hts_format` [INFO] [stdout] --> src/tbx/mod.rs:94:5 [INFO] [stdout] | [INFO] [stdout] 94 | hts_format: htslib::htsExactFormat, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 19.72s [INFO] running `Command { std: "docker" "inspect" "9830700c908b145ddab61160687d813d36e9d4144c8f53c3fc18c7665fe678a4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9830700c908b145ddab61160687d813d36e9d4144c8f53c3fc18c7665fe678a4", kill_on_drop: false }` [INFO] [stdout] 9830700c908b145ddab61160687d813d36e9d4144c8f53c3fc18c7665fe678a4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 2a567cadb615c1e35a92bcaf2d5b1efbfeb33b9939e21b080460a31de312bda1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2a567cadb615c1e35a92bcaf2d5b1efbfeb33b9939e21b080460a31de312bda1", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: field is never read: `buffer` [INFO] [stderr] --> src/bcf/record.rs:133:5 [INFO] [stderr] | [INFO] [stderr] 133 | buffer: B, [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field is never read: `hts_format` [INFO] [stderr] --> src/tbx/mod.rs:94:5 [INFO] [stderr] | [INFO] [stderr] 94 | hts_format: htslib::htsExactFormat, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `rust-htslib` (lib) generated 2 warnings [INFO] [stderr] warning: `rust-htslib` (lib test) generated 2 warnings (2 duplicates) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.47s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/rust_htslib-fabdfb1bfa965c32) [INFO] [stdout] [INFO] [stdout] running 118 tests [INFO] [stdout] test bam::record::alignment_cigar_tests::test_cigar ... ok [INFO] [stdout] test bam::record::alignment_cigar_tests::test_cigar_parsing ... ok [INFO] [stdout] test bam::record::alignment_cigar_tests::test_cigar_parsing_non_ascii_error ... ok [INFO] [stdout] test bam::ext::tests::test_reference_start_end ... ok [INFO] [stdout] test bam::ext::tests::test_aligned_pairs ... ok [INFO] [stdout] test bam::ext::tests::test_aligned_block_pairs ... ok [INFO] [stdout] test bam::buffer::tests::test_buffer ... ok [INFO] [stdout] test bam::record::tests::test_cigar_string ... ok [INFO] [stdout] test bam::ext::tests::test_reference_positions ... ok [INFO] [stdout] test bam::tests::test_aux_array_partial_eq ... ok [INFO] [stdout] test bam::tests::test_aux_arrays ... ok [INFO] [stdout] test bam::pileup::tests::test_max_pileup ... ok [INFO] [stdout] test bam::tests::parse_from_sam ... ok [INFO] [stdout] test bam::ext::tests::test_introns ... ok [INFO] [stdout] test bam::ext::tests::test_infer_seq_len ... ok [INFO] [stdout] test bam::ext::tests::test_get_cigar_stats ... ok [INFO] [stdout] test bam::tests::test_compression_level_conversion ... ok [INFO] [stdout] test bam::tests::test_bam_fails_on_toml ... ok [INFO] [stdout] test bam::ext::tests::spliced_reads ... ok [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stdout] test bam::ext::tests::test_reference_positions_full ... ok [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 2 after 0 of 4 bytes [INFO] [stdout] test bam::record::tests::test_cigar_read_pos ... ok [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stdout] test bam::record::tests::test_cigar_parse ... ok [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 3 after 0 of 4 bytes [INFO] [stdout] test bam::tests::test_cigar_modes ... ok [INFO] [stderr] [E::hts_open_format] Failed to open file "./test/bam2sam_out.sam" : Read-only file system [INFO] [stdout] test bam::tests::test_aux_scalars ... ok [INFO] [stdout] test bam::record::alignment_cigar_tests::test_read_orientation_f1r2 ... ok [INFO] [stdout] test bam::tests::test_copy_template ... ok [INFO] [stdout] test bam::tests::test_indexde_bam_fails_on_vcf ... ok [INFO] [stdout] test bam::tests::test_bam_fails_on_vcf ... ok [INFO] [stdout] test bam::record::tests::test_flags ... ok [INFO] [stdout] test bam::record::tests::test_clone ... ok [INFO] [stdout] test bam::tests::test_pileup ... ok [INFO] [stdout] test bam::tests::test_rc_records ... ok [INFO] [stdout] test bam::tests::test_set_qname ... ok [INFO] [stdout] test bam::tests::test_read_indexed ... ok [INFO] [stdout] test bam::tests::test_set_qname2 ... ok [INFO] [stdout] test bam::tests::test_read_sam_header ... ok [INFO] [stdout] test bam::tests::test_remove_aux ... ok [INFO] [stdout] test bam::tests::test_set_record ... ok [INFO] [stdout] test bam::tests::test_seek ... ok [INFO] [stdout] test bam::tests::test_read_against_sam ... ok [INFO] [stdout] test bam::tests::test_set_repeated ... ok [INFO] [stdout] test bam::tests::test_write ... ok [INFO] [stdout] test bam::tests::test_read ... ok [INFO] [stdout] test bcf::record::tests::test_missing_float ... ok [INFO] [stdout] test bcf::record::tests::test_record_clear ... ok [INFO] [stdout] test bcf::buffer::tests::test_buffer ... ok [INFO] [stdout] test bcf::record::tests::test_record_end ... ok [INFO] [stdout] test bcf::record::tests::test_record_has_filter_custom ... ok [INFO] [stdout] test bcf::record::tests::test_record_push_filter ... ok [INFO] [stdout] test bam::tests::test_write_compression ... ok [INFO] [stdout] test bcf::record::tests::test_record_set_filters ... ok [INFO] [stdout] test bcf::tests::test_alt_allele_dosage ... ok [INFO] [stdout] test bcf::record::tests::test_record_remove_filter ... ok [INFO] [stdout] test bam::tests::test_read_cram ... ok [INFO] [stdout] test bcf::record::tests::test_record_rlen ... ok [INFO] [stdout] test bcf::record::tests::test_record_has_filter_pass_is_default ... ok [INFO] [stdout] test bam::tests::test_bam_header_sync ... ok [INFO] [stdout] test bam::tests::test_write_cram ... ok [INFO] [stdout] test bcf::tests::test_fetch_all ... ok [INFO] [stdout] test bcf::record::tests::test_vector_end_float ... ok [INFO] [stdout] test bcf::tests::test_fails_on_non_existiant ... ok [INFO] [stdout] test bcf::tests::test_genotypes ... ok [INFO] [stdout] test bcf::tests::test_fetch ... ok [INFO] [stdout] test bcf::tests::test_genotype_missing_allele_conversion ... ok [INFO] [stdout] test bcf::tests::test_genotype_allele_conversion ... ok [INFO] [stdout] test bcf::tests::test_fetch_start_greater_than_last_vcf_pos ... ok [INFO] [stdout] test bcf::tests::test_header_ids ... ok [INFO] [stdout] test bcf::tests::test_fetch_open_ended ... ok [INFO] [stdout] test bcf::tests::test_fails_on_bam ... ok [INFO] [stdout] test bcf::tests::test_header_contigs ... ok [INFO] [stdout] test bcf::tests::test_header_records ... ok [INFO] [stderr] [W::vcf_parse] Contig '19' is not defined in the header. (Quick workaround: index the file with tabix.) [INFO] [stdout] test bcf::tests::test_header_samples ... ok [INFO] [stdout] test bcf::tests::test_missing ... ok [INFO] [stdout] test bcf::tests::test_obs_cornercase ... ok [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stdout] test bcf::tests::test_remove_alleles ... ok [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 2 after 0 of 4 bytes [INFO] [stderr] [E::bgzf_read_block] Failed to read BGZF header at offset 426 [INFO] [stderr] [E::bgzf_read] Read block operation failed with error 3 after 0 of 4 bytes [INFO] [stdout] test bam::tests::test_read_indexed_different_index_name ... ok [INFO] [stdout] test bcf::tests::test_strings ... ok [INFO] [stdout] test bcf::tests::test_read ... ok [INFO] [stdout] test bcf::tests::test_remove_headers ... ok [INFO] [stdout] test bcf::tests::test_header_info_types ... ok [INFO] [stdout] test bcf::tests::test_svlen ... ok [INFO] [stdout] test bcf::tests::test_synced_reader_fetch ... ok [INFO] [stdout] test bgzf::tests::test_is_bgzip_plain ... ok [INFO] [stdout] test bcf::tests::test_write_various ... ok [INFO] [stdout] test bgzf::tests::test_open_bgzip ... ok [INFO] [stdout] test bgzf::tests::test_open_gzip ... ok [INFO] [stdout] test bcf::tests::test_writer_set_threads ... ok [INFO] [stdout] test bgzf::tests::test_open_plain ... ok [INFO] [stdout] test faidx::tests::faidx_open ... ok [INFO] [stdout] test faidx::tests::faidx_position_too_large ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_between ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_end ... ok [INFO] [stdout] test bcf::tests::test_synced_reader ... ok [INFO] [stdout] test bgzf::tests::test_set_threadpool ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_first_base ... ok [INFO] [stdout] test faidx::tests::faidx_read_twice_string ... ok [INFO] [stdout] test faidx::tests::faidx_read_twice_bytes ... ok [INFO] [stderr] [E::idx_find_and_load] Could not retrieve index file for 'test/test.bam' [INFO] [stdout] test tbx::tests::test_fails_on_bam ... ok [INFO] [stdout] test tbx::tests::bed_fetch_from_chr1_iterator_api ... ok [INFO] [stderr] [E::idx_find_and_load] Could not retrieve index file for 'test/test_left.vcf' [INFO] [stdout] test tbx::tests::bed_fetch_from_chr1_read_api ... ok [INFO] [stdout] test tbx::tests::bed_basic ... ok [INFO] [stderr] [E::hts_idx_load3] Could not load local index file 'test/tabix_reader/bad_header.txt.gz.tbi' [INFO] [stdout] test tbx::tests::test_fails_on_vcf ... ok [INFO] [stdout] test tbx::tests::test_text_bad_header ... ok [INFO] [stdout] test tbx::tests::test_text_header_positions ... ok [INFO] [stdout] test tbx::tests::test_fails_on_non_existiant ... ok [INFO] [stdout] test bcf::tests::test_reader_set_threads ... ok [INFO] [stdout] test faidx::tests::faidx_read_chr_start ... ok [INFO] [stdout] test tbx::tests::test_text_header_regions ... ok [INFO] [stdout] test bcf::tests::test_multi_string_info_tag_number_a ... ok [INFO] [stdout] test bam::tests::test_idx_pileup ... ok [INFO] [stdout] test bcf::tests::test_write ... ok [INFO] [stdout] test bcf::tests::test_multi_string_info_tag ... ok [INFO] [stdout] test bam::ext::tests::test_aligned_pairs_full ... ok [INFO] [stdout] test bam::pileup::tests::test_max_pileup_to_high - should panic ... ok [INFO] [stdout] test bam::index::tests::test_index_build ... FAILED [INFO] [stdout] test bam::tests::test_sam_writer_example ... FAILED [INFO] [stdout] test bam::tests::test_write_threaded ... ok [INFO] [stdout] test bam::tests::test_write_shared_tpool ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- bam::index::tests::test_index_build stdout ---- [INFO] [stdout] thread 'bam::index::tests::test_index_build' panicked at 'called `Result::unwrap()` on an `Err` value: BamWriteIndex', src/bam/index.rs:72:51 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5618b71c305c - std::backtrace_rs::backtrace::libunwind::trace::h793e05efd273d0f4 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stdout] 1: 0x5618b71c305c - std::backtrace_rs::backtrace::trace_unsynchronized::h640b7b86ff610c77 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5618b71c305c - std::sys_common::backtrace::_print_fmt::h362fa2a4f354f877 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5618b71c305c - ::fmt::hf439e5ed84c74abd [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x5618b71e7cac - core::fmt::write::h72801a82c94e6ff1 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/fmt/mod.rs:1149:17 [INFO] [stdout] 5: 0x5618b71bea05 - std::io::Write::write_fmt::h54337adeb3504c03 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/io/mod.rs:1697:15 [INFO] [stdout] 6: 0x5618b71c4ed0 - std::sys_common::backtrace::_print::hb29ddd998d02631c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x5618b71c4ed0 - std::sys_common::backtrace::print::h81965e3d7c90fbb6 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x5618b71c4ed0 - std::panicking::default_hook::{{closure}}::h84db205ab6674b38 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:211:50 [INFO] [stdout] 9: 0x5618b71c4ab6 - std::panicking::default_hook::h1bf8bb4159936bca [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:225:9 [INFO] [stdout] 10: 0x5618b71c5584 - std::panicking::rust_panic_with_hook::hf8e86850fbbd03b1 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:606:17 [INFO] [stdout] 11: 0x5618b71c5060 - std::panicking::begin_panic_handler::{{closure}}::h590a0d6060ff866e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:502:13 [INFO] [stdout] 12: 0x5618b71c3514 - std::sys_common::backtrace::__rust_end_short_backtrace::h260b8bd1c848a03c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stdout] 13: 0x5618b71c4fc9 - rust_begin_unwind [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:498:5 [INFO] [stdout] 14: 0x5618b6a07d11 - core::panicking::panic_fmt::h7b8580d81fcbbacd [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panicking.rs:106:14 [INFO] [stdout] 15: 0x5618b6a07e03 - core::result::unwrap_failed::h885d3f7beb571353 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/result.rs:1613:5 [INFO] [stdout] 16: 0x5618b6bb27a2 - core::result::Result::unwrap::hed465bf3b525b858 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/result.rs:1295:23 [INFO] [stdout] 17: 0x5618b6ae63c4 - rust_htslib::bam::index::tests::test_index_build::hd3561e251c410904 [INFO] [stdout] at /opt/rustwide/workdir/src/bam/index.rs:72:9 [INFO] [stdout] 18: 0x5618b6ae62fa - rust_htslib::bam::index::tests::test_index_build::{{closure}}::h4f5a9538c53d12a5 [INFO] [stdout] at /opt/rustwide/workdir/src/bam/index.rs:67:5 [INFO] [stdout] 19: 0x5618b6b069ce - core::ops::function::FnOnce::call_once::hb0dbd5b2f14046b4 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x5618b6c10903 - core::ops::function::FnOnce::call_once::h24a32b9da1a40fdb [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x5618b6c10903 - test::__rust_begin_short_backtrace::h3c3a0492fb4a12eb [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:585:5 [INFO] [stdout] 22: 0x5618b6c0f517 - as core::ops::function::FnOnce>::call_once::h9a8e38435f73d5e0 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 23: 0x5618b6c0f517 - as core::ops::function::FnOnce<()>>::call_once::hb23d7496a0e6d1b4 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 24: 0x5618b6c0f517 - std::panicking::try::do_call::ha2bb9825b32d2cc2 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stdout] 25: 0x5618b6c0f517 - std::panicking::try::hdc38a574bbebc53e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stdout] 26: 0x5618b6c0f517 - std::panic::catch_unwind::hc45ed246595c621c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stdout] 27: 0x5618b6c0f517 - test::run_test_in_process::h4249138faaea8d54 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:608:18 [INFO] [stdout] 28: 0x5618b6c0f517 - test::run_test::run_test_inner::{{closure}}::h3c1b37669f6e9fd7 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:500:39 [INFO] [stdout] 29: 0x5618b6bdc7be - test::run_test::run_test_inner::{{closure}}::h388760469edd5c24 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:527:37 [INFO] [stdout] 30: 0x5618b6bdc7be - std::sys_common::backtrace::__rust_begin_short_backtrace::hbbaecdcfad18643e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stdout] 31: 0x5618b6be1518 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h09cd3ca65896da91 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/thread/mod.rs:484:17 [INFO] [stdout] 32: 0x5618b6be1518 - as core::ops::function::FnOnce<()>>::call_once::hc52dbb4f9088d18b [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 33: 0x5618b6be1518 - std::panicking::try::do_call::h4485cfee22b11c08 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stdout] 34: 0x5618b6be1518 - std::panicking::try::hb62aa8549e20c08b [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stdout] 35: 0x5618b6be1518 - std::panic::catch_unwind::ha322c7a5bc666762 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stdout] 36: 0x5618b6be1518 - std::thread::Builder::spawn_unchecked::{{closure}}::h1076fc1398603b77 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/thread/mod.rs:483:30 [INFO] [stdout] 37: 0x5618b6be1518 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h911e510344167353 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 38: 0x5618b71cabf3 - as core::ops::function::FnOnce>::call_once::h771719d52c343434 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 39: 0x5618b71cabf3 - as core::ops::function::FnOnce>::call_once::hf441746dfa4b0f57 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 40: 0x5618b71cabf3 - std::sys::unix::thread::Thread::new::thread_start::hfd168f9d312b29ca [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 41: 0x7efc4703d609 - start_thread [INFO] [stdout] 42: 0x7efc46e0d293 - clone [INFO] [stdout] 43: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- bam::tests::test_sam_writer_example stdout ---- [INFO] [stdout] thread 'bam::tests::test_sam_writer_example' panicked at 'called `Result::unwrap()` on an `Err` value: BamOpen { target: "./test/bam2sam_out.sam" }', src/bam/mod.rs:2272:83 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5618b71c305c - std::backtrace_rs::backtrace::libunwind::trace::h793e05efd273d0f4 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stdout] 1: 0x5618b71c305c - std::backtrace_rs::backtrace::trace_unsynchronized::h640b7b86ff610c77 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5618b71c305c - std::sys_common::backtrace::_print_fmt::h362fa2a4f354f877 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x5618b71c305c - ::fmt::hf439e5ed84c74abd [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x5618b71e7cac - core::fmt::write::h72801a82c94e6ff1 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/fmt/mod.rs:1149:17 [INFO] [stdout] 5: 0x5618b71bea05 - std::io::Write::write_fmt::h54337adeb3504c03 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/io/mod.rs:1697:15 [INFO] [stdout] 6: 0x5618b71c4ed0 - std::sys_common::backtrace::_print::hb29ddd998d02631c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x5618b71c4ed0 - std::sys_common::backtrace::print::h81965e3d7c90fbb6 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x5618b71c4ed0 - std::panicking::default_hook::{{closure}}::h84db205ab6674b38 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:211:50 [INFO] [stdout] 9: 0x5618b71c4ab6 - std::panicking::default_hook::h1bf8bb4159936bca [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:225:9 [INFO] [stdout] 10: 0x5618b71c5584 - std::panicking::rust_panic_with_hook::hf8e86850fbbd03b1 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:606:17 [INFO] [stdout] 11: 0x5618b71c5060 - std::panicking::begin_panic_handler::{{closure}}::h590a0d6060ff866e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:502:13 [INFO] [stdout] 12: 0x5618b71c3514 - std::sys_common::backtrace::__rust_end_short_backtrace::h260b8bd1c848a03c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stdout] 13: 0x5618b71c4fc9 - rust_begin_unwind [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:498:5 [INFO] [stdout] 14: 0x5618b6a07d11 - core::panicking::panic_fmt::h7b8580d81fcbbacd [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panicking.rs:106:14 [INFO] [stdout] 15: 0x5618b6a07e03 - core::result::unwrap_failed::h885d3f7beb571353 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/result.rs:1613:5 [INFO] [stdout] 16: 0x5618b6bb165e - core::result::Result::unwrap::h4cd323ba1930cb01 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/result.rs:1295:23 [INFO] [stdout] 17: 0x5618b6b6112d - rust_htslib::bam::tests::test_sam_writer_example::from_bam_with_filter::h24a30b9e2312d752 [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2272:34 [INFO] [stdout] 18: 0x5618b6b60bb5 - rust_htslib::bam::tests::test_sam_writer_example::haa81a4d54a9d840f [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2295:22 [INFO] [stdout] 19: 0x5618b6b60b2a - rust_htslib::bam::tests::test_sam_writer_example::{{closure}}::h6b896b33dcfa673b [INFO] [stdout] at /opt/rustwide/workdir/src/bam/mod.rs:2265:5 [INFO] [stdout] 20: 0x5618b6b0741e - core::ops::function::FnOnce::call_once::hf51e3168ab75259d [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x5618b6c10903 - core::ops::function::FnOnce::call_once::h24a32b9da1a40fdb [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x5618b6c10903 - test::__rust_begin_short_backtrace::h3c3a0492fb4a12eb [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:585:5 [INFO] [stdout] 23: 0x5618b6c0f517 - as core::ops::function::FnOnce>::call_once::h9a8e38435f73d5e0 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 24: 0x5618b6c0f517 - as core::ops::function::FnOnce<()>>::call_once::hb23d7496a0e6d1b4 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 25: 0x5618b6c0f517 - std::panicking::try::do_call::ha2bb9825b32d2cc2 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stdout] 26: 0x5618b6c0f517 - std::panicking::try::hdc38a574bbebc53e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stdout] 27: 0x5618b6c0f517 - std::panic::catch_unwind::hc45ed246595c621c [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stdout] 28: 0x5618b6c0f517 - test::run_test_in_process::h4249138faaea8d54 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:608:18 [INFO] [stdout] 29: 0x5618b6c0f517 - test::run_test::run_test_inner::{{closure}}::h3c1b37669f6e9fd7 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:500:39 [INFO] [stdout] 30: 0x5618b6bdc7be - test::run_test::run_test_inner::{{closure}}::h388760469edd5c24 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/test/src/lib.rs:527:37 [INFO] [stdout] 31: 0x5618b6bdc7be - std::sys_common::backtrace::__rust_begin_short_backtrace::hbbaecdcfad18643e [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stdout] 32: 0x5618b6be1518 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h09cd3ca65896da91 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/thread/mod.rs:484:17 [INFO] [stdout] 33: 0x5618b6be1518 - as core::ops::function::FnOnce<()>>::call_once::hc52dbb4f9088d18b [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panic/unwind_safe.rs:271:9 [INFO] [stdout] 34: 0x5618b6be1518 - std::panicking::try::do_call::h4485cfee22b11c08 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stdout] 35: 0x5618b6be1518 - std::panicking::try::hb62aa8549e20c08b [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stdout] 36: 0x5618b6be1518 - std::panic::catch_unwind::ha322c7a5bc666762 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stdout] 37: 0x5618b6be1518 - std::thread::Builder::spawn_unchecked::{{closure}}::h1076fc1398603b77 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/thread/mod.rs:483:30 [INFO] [stdout] 38: 0x5618b6be1518 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h911e510344167353 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x5618b71cabf3 - as core::ops::function::FnOnce>::call_once::h771719d52c343434 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 40: 0x5618b71cabf3 - as core::ops::function::FnOnce>::call_once::hf441746dfa4b0f57 [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/alloc/src/boxed.rs:1694:9 [INFO] [stdout] 41: 0x5618b71cabf3 - std::sys::unix::thread::Thread::new::thread_start::hfd168f9d312b29ca [INFO] [stdout] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys/unix/thread.rs:106:17 [INFO] [stdout] 42: 0x7efc4703d609 - start_thread [INFO] [stdout] 43: 0x7efc46e0d293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bam::index::tests::test_index_build [INFO] [stdout] bam::tests::test_sam_writer_example [INFO] [stdout] [INFO] [stdout] test result: FAILED. 116 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.45s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "2a567cadb615c1e35a92bcaf2d5b1efbfeb33b9939e21b080460a31de312bda1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2a567cadb615c1e35a92bcaf2d5b1efbfeb33b9939e21b080460a31de312bda1", kill_on_drop: false }` [INFO] [stdout] 2a567cadb615c1e35a92bcaf2d5b1efbfeb33b9939e21b080460a31de312bda1