[INFO] fetching crate netcdf-sys 0.3.5... [INFO] testing netcdf-sys-0.3.5 against try#8262275854dc0e5381c9d42d56257d94932c5a87 for pr-90799 [INFO] extracting crate netcdf-sys 0.3.5 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate netcdf-sys 0.3.5 on toolchain 8262275854dc0e5381c9d42d56257d94932c5a87 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate netcdf-sys 0.3.5 [INFO] finished tweaking crates.io crate netcdf-sys 0.3.5 [INFO] tweaked toml for crates.io crate netcdf-sys 0.3.5 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded winreg v0.8.0 [INFO] [stderr] Downloaded hdf5-sys v0.7.1 [INFO] [stderr] Downloaded netcdf-src v0.1.3 [INFO] [stderr] Downloaded hdf5-src v0.7.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8659cbc3b46d6aa264fec3af527bb04aab82d298ee5d125ba1e1aab96e75c55b [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8659cbc3b46d6aa264fec3af527bb04aab82d298ee5d125ba1e1aab96e75c55b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8659cbc3b46d6aa264fec3af527bb04aab82d298ee5d125ba1e1aab96e75c55b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8659cbc3b46d6aa264fec3af527bb04aab82d298ee5d125ba1e1aab96e75c55b", kill_on_drop: false }` [INFO] [stdout] 8659cbc3b46d6aa264fec3af527bb04aab82d298ee5d125ba1e1aab96e75c55b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] b9d3db6bb2cf7ae0bef8b1b5e68f4be6eeaba3bef3372e3580794c7019429af9 [INFO] running `Command { std: "docker" "start" "-a" "b9d3db6bb2cf7ae0bef8b1b5e68f4be6eeaba3bef3372e3580794c7019429af9", kill_on_drop: false }` [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling netcdf-sys v0.3.5 (/opt/rustwide/workdir) [INFO] [stderr] Compiling libloading v0.6.7 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling hdf5-sys v0.7.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-b58207f0f528d97d/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55d32773309c - std::backtrace_rs::backtrace::libunwind::trace::h793e05efd273d0f4 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x55d32773309c - std::backtrace_rs::backtrace::trace_unsynchronized::h640b7b86ff610c77 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55d32773309c - std::sys_common::backtrace::_print_fmt::h362fa2a4f354f877 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55d32773309c - ::fmt::hf439e5ed84c74abd [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55d327751d0c - core::fmt::write::h72801a82c94e6ff1 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/fmt/mod.rs:1149:17 [INFO] [stderr] 5: 0x55d32772f8d5 - std::io::Write::write_fmt::h5562a8b6da0f0339 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/io/mod.rs:1697:15 [INFO] [stderr] 6: 0x55d327734a10 - std::sys_common::backtrace::_print::hb29ddd998d02631c [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55d327734a10 - std::sys_common::backtrace::print::h81965e3d7c90fbb6 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55d327734a10 - std::panicking::default_hook::{{closure}}::h84db205ab6674b38 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:211:50 [INFO] [stderr] 9: 0x55d3277345bb - std::panicking::default_hook::h1bf8bb4159936bca [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:228:9 [INFO] [stderr] 10: 0x55d3277350c4 - std::panicking::rust_panic_with_hook::hf8e86850fbbd03b1 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:606:17 [INFO] [stderr] 11: 0x55d32766f882 - std::panicking::begin_panic::{{closure}}::he974e9b1310ac583 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:526:9 [INFO] [stderr] 12: 0x55d32766c209 - std::sys_common::backtrace::__rust_end_short_backtrace::h62b115649d642f8d [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stderr] 13: 0x55d32766f7c3 - std::panicking::begin_panic::hf4f81b7abddfa2a5 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:525:12 [INFO] [stderr] 14: 0x55d327529b17 - build_script_build::LibrarySearcher::try_locate_hdf5_library::haabd48f869ec5794 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:549:13 [INFO] [stderr] 15: 0x55d32752b2b7 - build_script_build::main::heba19799cb955ce1 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.1/build.rs:647:9 [INFO] [stderr] 16: 0x55d32752f91b - core::ops::function::FnOnce::call_once::h98012f2c3b9747fd [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55d32753558e - std::sys_common::backtrace::__rust_begin_short_backtrace::h2f614794f4cd958f [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stderr] 18: 0x55d327533961 - std::rt::lang_start::{{closure}}::ha2de06843c9a1077 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:145:18 [INFO] [stderr] 19: 0x55d3277328e1 - core::ops::function::impls:: for &F>::call_once::h42d3791e66d196c0 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55d3277328e1 - std::panicking::try::do_call::hc3bcb188e535517f [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stderr] 21: 0x55d3277328e1 - std::panicking::try::hb1edf04d4a7097ab [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stderr] 22: 0x55d3277328e1 - std::panic::catch_unwind::h75ed941ac0d36d57 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stderr] 23: 0x55d3277328e1 - std::rt::lang_start_internal::{{closure}}::hc702b3389af4cbea [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:128:48 [INFO] [stderr] 24: 0x55d3277328e1 - std::panicking::try::do_call::h53276a03c7fe2ebc [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stderr] 25: 0x55d3277328e1 - std::panicking::try::ha9e37f45dc542517 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stderr] 26: 0x55d3277328e1 - std::panic::catch_unwind::h182647595766fee7 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stderr] 27: 0x55d3277328e1 - std::rt::lang_start_internal::h571831ebdba142de [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:128:20 [INFO] [stderr] 28: 0x55d327533930 - std::rt::lang_start::h2eef22d5ffdadec2 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:144:17 [INFO] [stderr] 29: 0x55d32752c75c - main [INFO] [stderr] 30: 0x7fda24b450b3 - __libc_start_main [INFO] [stderr] 31: 0x55d327524d9e - _start [INFO] [stderr] 32: 0x0 - [INFO] running `Command { std: "docker" "inspect" "b9d3db6bb2cf7ae0bef8b1b5e68f4be6eeaba3bef3372e3580794c7019429af9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b9d3db6bb2cf7ae0bef8b1b5e68f4be6eeaba3bef3372e3580794c7019429af9", kill_on_drop: false }` [INFO] [stdout] b9d3db6bb2cf7ae0bef8b1b5e68f4be6eeaba3bef3372e3580794c7019429af9