[INFO] fetching crate flann 0.1.0... [INFO] testing flann-0.1.0 against try#8262275854dc0e5381c9d42d56257d94932c5a87 for pr-90799 [INFO] extracting crate flann 0.1.0 into /workspace/builds/worker-19/source [INFO] validating manifest of crates.io crate flann 0.1.0 on toolchain 8262275854dc0e5381c9d42d56257d94932c5a87 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate flann 0.1.0 [INFO] finished tweaking crates.io crate flann 0.1.0 [INFO] tweaked toml for crates.io crate flann 0.1.0 written to /workspace/builds/worker-19/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c7aa63ed99da9d169d7cc4d10d780c4078a738f8352f7ba3713653c13d6473e1 [INFO] running `Command { std: "docker" "start" "-a" "c7aa63ed99da9d169d7cc4d10d780c4078a738f8352f7ba3713653c13d6473e1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c7aa63ed99da9d169d7cc4d10d780c4078a738f8352f7ba3713653c13d6473e1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c7aa63ed99da9d169d7cc4d10d780c4078a738f8352f7ba3713653c13d6473e1", kill_on_drop: false }` [INFO] [stdout] c7aa63ed99da9d169d7cc4d10d780c4078a738f8352f7ba3713653c13d6473e1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-19/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7ff580dfcc8a4c7ea781756e2a96c69a708f56ce1b62e5fca05cd2c791693918 [INFO] running `Command { std: "docker" "start" "-a" "7ff580dfcc8a4c7ea781756e2a96c69a708f56ce1b62e5fca05cd2c791693918", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling glob v0.2.11 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling libloading v0.4.3 [INFO] [stderr] Compiling ucd-util v0.1.8 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling bindgen v0.32.3 [INFO] [stderr] Compiling syn v1.0.82 [INFO] [stderr] Compiling ansi_term v0.12.1 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Compiling typenum v1.14.0 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling object v0.27.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling proc-macro2 v0.2.3 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling regex-syntax v0.5.6 [INFO] [stderr] Compiling clang-sys v0.21.2 [INFO] [stderr] Compiling cmake v0.1.46 [INFO] [stderr] Compiling quote v0.4.2 [INFO] [stderr] Compiling log v0.3.9 [INFO] [stderr] Compiling backtrace v0.3.63 [INFO] [stderr] Compiling generic-array v0.12.4 [INFO] [stderr] Compiling memchr v1.0.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v1.0.5 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling nom v3.2.1 [INFO] [stderr] Compiling synstructure v0.12.6 [INFO] [stderr] Compiling env_logger v0.4.3 [INFO] [stderr] Compiling cexpr v0.2.3 [INFO] [stderr] Compiling failure v0.1.8 [INFO] [stderr] Compiling flann-sys v0.1.0 [INFO] [stderr] error: failed to run custom build command for `flann-sys v0.1.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/flann-sys-aee0b71dc0f99fd0/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] cargo:rustc-link-lib=gomp [INFO] [stderr] cargo:rustc-link-lib=stdc++ [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: "cmake" "/opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/flann" "-DBUILD_EXAMPLES=OFF" "-DBUILD_TESTS=OFF" "-DBUILD_DOC=OFF" "-DBUILD_PYTHON_BINDINGS=OFF" "-DBUILD_MATLAB_BINDINGS=OFF" "-DUSE_OPENMP=ON" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/flann-sys-7ed0c7f3e9c5d32a/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug" [INFO] [stderr] -- The C compiler identification is GNU 9.3.0 [INFO] [stderr] -- The CXX compiler identification is GNU 9.3.0 [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc -- works [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ -- works [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- Found PythonInterp: /usr/bin/python (found version "2.7.18") [INFO] [stderr] -- Could NOT find HDF5 (missing: HDF5_LIBRARIES HDF5_INCLUDE_DIRS) (found version "") [INFO] [stderr] -- Could NOT find GTest (missing: GTEST_LIBRARY GTEST_INCLUDE_DIR GTEST_MAIN_LIBRARY) [INFO] [stderr] -- Found OpenMP_C: -fopenmp (found version "4.5") [INFO] [stderr] -- Found OpenMP_CXX: -fopenmp (found version "4.5") [INFO] [stderr] -- Found OpenMP: TRUE (found version "4.5") [INFO] [stderr] -- Install prefix: /opt/rustwide/target/debug/build/flann-sys-7ed0c7f3e9c5d32a/out [INFO] [stderr] -- Build type: Debug [INFO] [stderr] -- Building C bindings: ON [INFO] [stderr] -- Building examples: OFF [INFO] [stderr] -- Building tests: OFF [INFO] [stderr] -- Building documentation: OFF [INFO] [stderr] -- Building python bindings: OFF [INFO] [stderr] -- Building matlab bindings: OFF [INFO] [stderr] -- Building CUDA library: OFF [INFO] [stderr] -- Using OpenMP support: ON [INFO] [stderr] -- Using MPI support: OFF [INFO] [stderr] -- Configuring incomplete, errors occurred! [INFO] [stderr] See also "/opt/rustwide/target/debug/build/flann-sys-7ed0c7f3e9c5d32a/out/build/CMakeFiles/CMakeOutput.log". [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] CMake Warning at CMakeLists.txt:78 (message): [INFO] [stderr] hdf5 library not found, some tests will not be run [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning at CMakeLists.txt:117 (message): [INFO] [stderr] gtest library not found, some tests will not be run [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Error: Could not open file for write in copy operation /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/flann/src/cpp/flann/config.h.tmp [INFO] [stderr] CMake Error: : System Error: Read-only file system [INFO] [stderr] CMake Error at src/cpp/CMakeLists.txt:5 (configure_file): [INFO] [stderr] configure_file Problem configuring file [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] thread 'main' panicked at ' [INFO] [stderr] command did not execute successfully, got: exit status: 1 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:974:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e7a4d87d2c - std::backtrace_rs::backtrace::libunwind::trace::h793e05efd273d0f4 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x55e7a4d87d2c - std::backtrace_rs::backtrace::trace_unsynchronized::h640b7b86ff610c77 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55e7a4d87d2c - std::sys_common::backtrace::_print_fmt::h362fa2a4f354f877 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55e7a4d87d2c - ::fmt::hf439e5ed84c74abd [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55e7a4daddbc - core::fmt::write::h72801a82c94e6ff1 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/fmt/mod.rs:1149:17 [INFO] [stderr] 5: 0x55e7a4d83ab5 - std::io::Write::write_fmt::h5562a8b6da0f0339 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/io/mod.rs:1697:15 [INFO] [stderr] 6: 0x55e7a4d89ba0 - std::sys_common::backtrace::_print::hb29ddd998d02631c [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55e7a4d89ba0 - std::sys_common::backtrace::print::h81965e3d7c90fbb6 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55e7a4d89ba0 - std::panicking::default_hook::{{closure}}::h84db205ab6674b38 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:211:50 [INFO] [stderr] 9: 0x55e7a4d8974b - std::panicking::default_hook::h1bf8bb4159936bca [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:228:9 [INFO] [stderr] 10: 0x55e7a4d8a254 - std::panicking::rust_panic_with_hook::hf8e86850fbbd03b1 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:606:17 [INFO] [stderr] 11: 0x55e7a4d89d30 - std::panicking::begin_panic_handler::{{closure}}::h590a0d6060ff866e [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:502:13 [INFO] [stderr] 12: 0x55e7a4d881e4 - std::sys_common::backtrace::__rust_end_short_backtrace::h260b8bd1c848a03c [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stderr] 13: 0x55e7a4d89c99 - rust_begin_unwind [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:498:5 [INFO] [stderr] 14: 0x55e7a4895731 - core::panicking::panic_fmt::h7b8580d81fcbbacd [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/panicking.rs:106:14 [INFO] [stderr] 15: 0x55e7a48a0e83 - cmake::fail::hceceaae959cc1254 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:974:5 [INFO] [stderr] 16: 0x55e7a48a08a9 - cmake::run::h804ff7c1064974cb [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:952:9 [INFO] [stderr] 17: 0x55e7a489d0e6 - cmake::Config::build::hb5771f07923f3063 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.46/src/lib.rs:780:13 [INFO] [stderr] 18: 0x55e7a48979e9 - build_script_build::main::h1fcd1414ea4b6e92 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/flann-sys-0.1.0/build.rs:30:19 [INFO] [stderr] 19: 0x55e7a48968eb - core::ops::function::FnOnce::call_once::h51a388e6150e9033 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 20: 0x55e7a48966ee - std::sys_common::backtrace::__rust_begin_short_backtrace::h47c8a7cd1e289873 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stderr] 21: 0x55e7a48965a1 - std::rt::lang_start::{{closure}}::ha48450d525fa83cc [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:145:18 [INFO] [stderr] 22: 0x55e7a4d87571 - core::ops::function::impls:: for &F>::call_once::h42d3791e66d196c0 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 23: 0x55e7a4d87571 - std::panicking::try::do_call::hc3bcb188e535517f [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stderr] 24: 0x55e7a4d87571 - std::panicking::try::hb1edf04d4a7097ab [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stderr] 25: 0x55e7a4d87571 - std::panic::catch_unwind::h75ed941ac0d36d57 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stderr] 26: 0x55e7a4d87571 - std::rt::lang_start_internal::{{closure}}::hc702b3389af4cbea [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:128:48 [INFO] [stderr] 27: 0x55e7a4d87571 - std::panicking::try::do_call::h53276a03c7fe2ebc [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:406:40 [INFO] [stderr] 28: 0x55e7a4d87571 - std::panicking::try::ha9e37f45dc542517 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panicking.rs:370:19 [INFO] [stderr] 29: 0x55e7a4d87571 - std::panic::catch_unwind::h182647595766fee7 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/panic.rs:133:14 [INFO] [stderr] 30: 0x55e7a4d87571 - std::rt::lang_start_internal::h571831ebdba142de [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:128:20 [INFO] [stderr] 31: 0x55e7a4896570 - std::rt::lang_start::h2b8f7aad39e36733 [INFO] [stderr] at /rustc/8262275854dc0e5381c9d42d56257d94932c5a87/library/std/src/rt.rs:144:17 [INFO] [stderr] 32: 0x55e7a4897e6c - main [INFO] [stderr] 33: 0x7f8068e9d0b3 - __libc_start_main [INFO] [stderr] 34: 0x55e7a4895eee - _start [INFO] [stderr] 35: 0x0 - [INFO] running `Command { std: "docker" "inspect" "7ff580dfcc8a4c7ea781756e2a96c69a708f56ce1b62e5fca05cd2c791693918", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7ff580dfcc8a4c7ea781756e2a96c69a708f56ce1b62e5fca05cd2c791693918", kill_on_drop: false }` [INFO] [stdout] 7ff580dfcc8a4c7ea781756e2a96c69a708f56ce1b62e5fca05cd2c791693918