[INFO] cloning repository https://github.com/natir/ssik [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/natir/ssik" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fssik", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fssik'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] abe560995116a5e853ab209010a617ec2c6bd6c6 [INFO] testing natir/ssik against try#8262275854dc0e5381c9d42d56257d94932c5a87 for pr-90799 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fssik" "/workspace/builds/worker-7/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/natir/ssik on toolchain 8262275854dc0e5381c9d42d56257d94932c5a87 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/natir/ssik [INFO] finished tweaking git repo https://github.com/natir/ssik [INFO] tweaked toml for git repo https://github.com/natir/ssik written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/natir/ssik already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating git repository `https://github.com/natir/cocktail.git` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] dc6bb8f3f5f4e1b3e07a8f63b244540be7be161980d0b38250ddae0e054d8f74 [INFO] running `Command { std: "docker" "start" "-a" "dc6bb8f3f5f4e1b3e07a8f63b244540be7be161980d0b38250ddae0e054d8f74", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "dc6bb8f3f5f4e1b3e07a8f63b244540be7be161980d0b38250ddae0e054d8f74", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dc6bb8f3f5f4e1b3e07a8f63b244540be7be161980d0b38250ddae0e054d8f74", kill_on_drop: false }` [INFO] [stdout] dc6bb8f3f5f4e1b3e07a8f63b244540be7be161980d0b38250ddae0e054d8f74 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 7c8df6f7137d3aab4713d892fdc60c299184f6b1307b0a4e4fff8b1ceb5b1a92 [INFO] running `Command { std: "docker" "start" "-a" "7c8df6f7137d3aab4713d892fdc60c299184f6b1307b0a4e4fff8b1ceb5b1a92", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.81 [INFO] [stderr] Compiling cc v1.0.71 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling ppv-lite86 v0.2.15 [INFO] [stderr] Compiling typenum v1.14.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling anyhow v1.0.45 [INFO] [stderr] Compiling bio v0.39.0 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling funty v1.2.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling strum v0.21.0 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling cocktail v0.1.0 (https://github.com/natir/cocktail.git#464dfba9) [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling matrixmultiply v0.3.1 [INFO] [stderr] Compiling itertools v0.10.1 [INFO] [stderr] Compiling wyz v0.4.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling textwrap v0.14.2 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling term_size v0.3.2 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling bitvec v0.22.3 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling num-complex v0.4.0 [INFO] [stderr] Compiling approx v0.5.0 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling rand_distr v0.4.2 [INFO] [stderr] Compiling env_logger v0.9.0 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling simba v0.5.1 [INFO] [stderr] Compiling ndarray v0.15.3 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling thiserror-impl v1.0.30 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling clap_derive v3.0.0-beta.5 [INFO] [stderr] Compiling getset v0.1.1 [INFO] [stderr] Compiling strum_macros v0.21.1 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling thiserror v1.0.30 [INFO] [stderr] Compiling bgzip v0.2.1 [INFO] [stderr] Compiling bio-types v0.12.0 [INFO] [stderr] Compiling clap v3.0.0-beta.5 [INFO] [stderr] Compiling niffler v2.3.2 [INFO] [stderr] Compiling nalgebra v0.27.1 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling statrs v0.15.0 [INFO] [stderr] Compiling pcon v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 05s [INFO] running `Command { std: "docker" "inspect" "7c8df6f7137d3aab4713d892fdc60c299184f6b1307b0a4e4fff8b1ceb5b1a92", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7c8df6f7137d3aab4713d892fdc60c299184f6b1307b0a4e4fff8b1ceb5b1a92", kill_on_drop: false }` [INFO] [stdout] 7c8df6f7137d3aab4713d892fdc60c299184f6b1307b0a4e4fff8b1ceb5b1a92 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ec82a552988e42a2feb22d5d84bd751c31e33a3d0276e7e508ce5a9bb2c06da3 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ec82a552988e42a2feb22d5d84bd751c31e33a3d0276e7e508ce5a9bb2c06da3", kill_on_drop: false }` [INFO] [stderr] Compiling pcon v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 8.14s [INFO] running `Command { std: "docker" "inspect" "ec82a552988e42a2feb22d5d84bd751c31e33a3d0276e7e508ce5a9bb2c06da3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec82a552988e42a2feb22d5d84bd751c31e33a3d0276e7e508ce5a9bb2c06da3", kill_on_drop: false }` [INFO] [stdout] ec82a552988e42a2feb22d5d84bd751c31e33a3d0276e7e508ce5a9bb2c06da3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+8262275854dc0e5381c9d42d56257d94932c5a87" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 8b50a89ab8368a19d89039474312b8db872de1c18328491f0512d2e27d100495 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8b50a89ab8368a19d89039474312b8db872de1c18328491f0512d2e27d100495", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/pcon-32864c520f819183) [INFO] [stdout] [INFO] [stdout] running 17 tests [INFO] [stdout] test counter::tests::count_fastq ... ignored [INFO] [stdout] test counter::tests::count_fasta ... ok [INFO] [stdout] test spectrum::tests::failled_first_local_min ... ok [INFO] [stdout] test dump::tests::csv ... ok [INFO] [stdout] test spectrum::tests::failled_rarefaction ... ok [INFO] [stdout] test counter::tests::deserialize ... ok [INFO] [stdout] test spectrum::tests::first_local_min ... ok [INFO] [stdout] test spectrum::tests::rarefaction ... ok [INFO] [stdout] test solid::tests::set_value ... ok [INFO] [stdout] test solid::tests::deserialize ... ok [INFO] [stdout] test solid::tests::serialize ... ok [INFO] [stdout] test dump::tests::solid ... ok [INFO] [stdout] test counter::tests::serialize ... ok [INFO] [stdout] test solid::tests::presence ... ok [INFO] [stdout] test spectrum::tests::from_counter ... ok [INFO] [stdout] test spectrum::tests::test_draw_hist ... ok [INFO] [stdout] test dump::tests::spectrum ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 16 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/pcon-7700a604443d06ee) [INFO] [stdout] [INFO] [stderr] Doc-tests pcon [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "8b50a89ab8368a19d89039474312b8db872de1c18328491f0512d2e27d100495", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8b50a89ab8368a19d89039474312b8db872de1c18328491f0512d2e27d100495", kill_on_drop: false }` [INFO] [stdout] 8b50a89ab8368a19d89039474312b8db872de1c18328491f0512d2e27d100495