[INFO] fetching crate libhmmer-sys 0.1.0...
[INFO] testing libhmmer-sys-0.1.0 against master#62efba8a050c64249dab942951bb28f710208bc8 for pr-90799
[INFO] extracting crate libhmmer-sys 0.1.0 into /workspace/builds/worker-51/source
[INFO] validating manifest of crates.io crate libhmmer-sys 0.1.0 on toolchain 62efba8a050c64249dab942951bb28f710208bc8
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate libhmmer-sys 0.1.0
[INFO] finished tweaking crates.io crate libhmmer-sys 0.1.0
[INFO] tweaked toml for crates.io crate libhmmer-sys 0.1.0 written to /workspace/builds/worker-51/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e0684edd781a8a5ffc8087c957a3d6230fba8b6fa91f51064e3bbeeb22267ab8
[INFO] running `Command { std: "docker" "start" "-a" "e0684edd781a8a5ffc8087c957a3d6230fba8b6fa91f51064e3bbeeb22267ab8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e0684edd781a8a5ffc8087c957a3d6230fba8b6fa91f51064e3bbeeb22267ab8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e0684edd781a8a5ffc8087c957a3d6230fba8b6fa91f51064e3bbeeb22267ab8", kill_on_drop: false }`
[INFO] [stdout] e0684edd781a8a5ffc8087c957a3d6230fba8b6fa91f51064e3bbeeb22267ab8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c64be329c539d71c1c67dd731bb0d3fe6c23373a20a8122a184c0aabb514f17f
[INFO] running `Command { std: "docker" "start" "-a" "c64be329c539d71c1c67dd731bb0d3fe6c23373a20a8122a184c0aabb514f17f", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.32
[INFO] [stderr]    Compiling unicode-width v0.1.9
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling either v1.6.1
[INFO] [stderr]    Compiling bindgen v0.59.2
[INFO] [stderr]    Compiling shlex v1.1.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling fs_extra v1.2.0
[INFO] [stderr]    Compiling nom v7.1.0
[INFO] [stderr]    Compiling libloading v0.7.2
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling num_cpus v1.13.0
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling which v4.2.2
[INFO] [stderr]    Compiling clang-sys v1.3.0
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling quote v1.0.10
[INFO] [stderr]    Compiling env_logger v0.9.0
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling libhmmer-sys v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 31.77s
[INFO] running `Command { std: "docker" "inspect" "c64be329c539d71c1c67dd731bb0d3fe6c23373a20a8122a184c0aabb514f17f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c64be329c539d71c1c67dd731bb0d3fe6c23373a20a8122a184c0aabb514f17f", kill_on_drop: false }`
[INFO] [stdout] c64be329c539d71c1c67dd731bb0d3fe6c23373a20a8122a184c0aabb514f17f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3e6107ac74691db80b74b9bb24c204623e791992c5f4385df06ddbcd49eb6d3f
[INFO] running `Command { std: "docker" "start" "-a" "3e6107ac74691db80b74b9bb24c204623e791992c5f4385df06ddbcd49eb6d3f", kill_on_drop: false }`
[INFO] [stderr]    Compiling libhmmer-sys v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.81s
[INFO] running `Command { std: "docker" "inspect" "3e6107ac74691db80b74b9bb24c204623e791992c5f4385df06ddbcd49eb6d3f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3e6107ac74691db80b74b9bb24c204623e791992c5f4385df06ddbcd49eb6d3f", kill_on_drop: false }`
[INFO] [stdout] 3e6107ac74691db80b74b9bb24c204623e791992c5f4385df06ddbcd49eb6d3f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-51/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 693e8432937a29a54bf3a7dc0691812b5c98146f8f31eae5027a9c9aeeb94341
[INFO] running `Command { std: "docker" "start" "-a" "693e8432937a29a54bf3a7dc0691812b5c98146f8f31eae5027a9c9aeeb94341", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.03s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/libhmmer_sys-a03f7d7ffe0709d2)
[INFO] [stdout] 
[INFO] [stdout] running 67 tests
[INFO] [stdout] test bindgen_test_layout_ESL_ALPHABET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BITFIELD ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BUFFER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_DMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_FILEPARSER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_GETOPTS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HISTOGRAM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_KEYHASH ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MIXDCHLET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE_FMTDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_NEWSSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_OPTIONS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PERMUTATION ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RAND64 ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RANDOMNESS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SCOREMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_STOPWATCH ... ok
[INFO] [stdout] test bindgen_test_layout_FM_CFG ... ok
[INFO] [stdout] test bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_internal_list ... ok
[INFO] [stdout] test bindgen_test_layout_P7_OM_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_mutex_s ... ok
[INFO] [stdout] test bindgen_test_layout___va_list_tag ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqascii_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqcache_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqio_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_vol_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_ambiglist_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_data_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_interval_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_metadata_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_seqdata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_alidisplay_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_bg_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_builder_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_dom_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_domaindef_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_gmx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hit_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_list_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmmfile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_omx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_oprofile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_pipeline_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_prior_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_profile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s__bindgen_ty_1 ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spcoord_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spensemble_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_tophits_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_trace_s ... ok
[INFO] [stdout] test bindgen_test_layout_pthread_mutex_t ... ok
[INFO] [stdout] test bindgen_test_layout_tms ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 67 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests libhmmer-sys
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "693e8432937a29a54bf3a7dc0691812b5c98146f8f31eae5027a9c9aeeb94341", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "693e8432937a29a54bf3a7dc0691812b5c98146f8f31eae5027a9c9aeeb94341", kill_on_drop: false }`
[INFO] [stdout] 693e8432937a29a54bf3a7dc0691812b5c98146f8f31eae5027a9c9aeeb94341