[INFO] fetching crate kseq 0.2.6... [INFO] testing kseq-0.2.6 against master#62efba8a050c64249dab942951bb28f710208bc8 for pr-90799 [INFO] extracting crate kseq 0.2.6 into /workspace/builds/worker-65/source [INFO] validating manifest of crates.io crate kseq 0.2.6 on toolchain 62efba8a050c64249dab942951bb28f710208bc8 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate kseq 0.2.6 [INFO] finished tweaking crates.io crate kseq 0.2.6 [INFO] tweaked toml for crates.io crate kseq 0.2.6 written to /workspace/builds/worker-65/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bb09433bf32460a12e60fa88a4d3d4d4b5220f3bd0add9f21a8f2a936b3a75fe [INFO] running `Command { std: "docker" "start" "-a" "bb09433bf32460a12e60fa88a4d3d4d4b5220f3bd0add9f21a8f2a936b3a75fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bb09433bf32460a12e60fa88a4d3d4d4b5220f3bd0add9f21a8f2a936b3a75fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bb09433bf32460a12e60fa88a4d3d4d4b5220f3bd0add9f21a8f2a936b3a75fe", kill_on_drop: false }` [INFO] [stdout] bb09433bf32460a12e60fa88a4d3d4d4b5220f3bd0add9f21a8f2a936b3a75fe [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2179bd9a4ce4a99c72aa3f9d072d9e822bd368a9fdf07776f3291334bcc3b38b [INFO] running `Command { std: "docker" "start" "-a" "2179bd9a4ce4a99c72aa3f9d072d9e822bd368a9fdf07776f3291334bcc3b38b", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.0.72 [INFO] [stderr] Compiling libc v0.2.108 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling pkg-config v0.3.22 [INFO] [stderr] Compiling crc32fast v1.3.0 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling flate2 v1.0.22 [INFO] [stderr] Compiling kseq v0.2.6 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 4.74s [INFO] running `Command { std: "docker" "inspect" "2179bd9a4ce4a99c72aa3f9d072d9e822bd368a9fdf07776f3291334bcc3b38b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2179bd9a4ce4a99c72aa3f9d072d9e822bd368a9fdf07776f3291334bcc3b38b", kill_on_drop: false }` [INFO] [stdout] 2179bd9a4ce4a99c72aa3f9d072d9e822bd368a9fdf07776f3291334bcc3b38b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e7e50f6c23b41947a37234e059df52f0696c4e48464ee23842b1a9a459c44804 [INFO] running `Command { std: "docker" "start" "-a" "e7e50f6c23b41947a37234e059df52f0696c4e48464ee23842b1a9a459c44804", kill_on_drop: false }` [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Compiling semver v1.0.4 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling ryu v1.0.6 [INFO] [stderr] Compiling proc-macro2 v1.0.32 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling serde_json v1.0.72 [INFO] [stderr] Compiling syn v1.0.82 [INFO] [stderr] Compiling plotters-backend v0.3.2 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling half v1.8.2 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling oorandom v11.1.3 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling itertools v0.10.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling walkdir v2.3.2 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling plotters-svg v0.3.1 [INFO] [stderr] Compiling serde_cbor v0.11.2 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.1 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling buf_redux v0.8.4 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling quote v1.0.10 [INFO] [stderr] Compiling crossbeam-deque v0.8.1 [INFO] [stderr] Compiling plotters v0.3.1 [INFO] [stderr] Compiling cast v0.2.7 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling bzip2 v0.4.3 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling needletail v0.4.1 [INFO] [stderr] Compiling criterion-plot v0.4.4 [INFO] [stderr] Compiling criterion v0.3.5 [INFO] [stderr] Compiling kseq v0.2.6 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 21.09s [INFO] running `Command { std: "docker" "inspect" "e7e50f6c23b41947a37234e059df52f0696c4e48464ee23842b1a9a459c44804", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e7e50f6c23b41947a37234e059df52f0696c4e48464ee23842b1a9a459c44804", kill_on_drop: false }` [INFO] [stdout] e7e50f6c23b41947a37234e059df52f0696c4e48464ee23842b1a9a459c44804 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-65/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 9d63e9b98d5a627d734787523815336500c4b0c2084b2e3e4847a2849988f09f [INFO] running `Command { std: "docker" "start" "-a" "9d63e9b98d5a627d734787523815336500c4b0c2084b2e3e4847a2849988f09f", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.00s [INFO] [stderr] Running unittests (/opt/rustwide/target/debug/deps/kseq-314fdb9a2cf0f064) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/test.rs (/opt/rustwide/target/debug/deps/test-b0e2f52007586fcf) [INFO] [stdout] [INFO] [stdout] running 11 tests [INFO] [stdout] test test_invalid_fasta ... ok [INFO] [stdout] test test_invalid_fastq_miss_sep ... ok [INFO] [stdout] test test_invalid_fastq_seq_has_diff_len_with_qual ... ok [INFO] [stdout] test test_normal_multi_line_fasta ... ok [INFO] [stdout] test test_normal_multi_line_fastq ... ok [INFO] [stdout] test test_normal_one_line_fasta ... ok [INFO] [stdout] test test_normal_one_line_fastq ... ok [INFO] [stdout] test test_truncate_fasta ... ok [INFO] [stdout] test test_truncate_fastq_miss_sep ... ok [INFO] [stdout] test test_truncate_fastq_miss_seq ... ok [INFO] [stdout] test test_truncate_fastq_miss_qual ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Doc-tests kseq [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test src/lib.rs - (line 43) ... ignored [INFO] [stdout] test src/lib.rs - (line 27) - compile ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.11s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "9d63e9b98d5a627d734787523815336500c4b0c2084b2e3e4847a2849988f09f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9d63e9b98d5a627d734787523815336500c4b0c2084b2e3e4847a2849988f09f", kill_on_drop: false }` [INFO] [stdout] 9d63e9b98d5a627d734787523815336500c4b0c2084b2e3e4847a2849988f09f