[INFO] fetching crate hts 0.1.18... [INFO] testing hts-0.1.18 against master#62efba8a050c64249dab942951bb28f710208bc8 for pr-90799 [INFO] extracting crate hts 0.1.18 into /workspace/builds/worker-13/source [INFO] validating manifest of crates.io crate hts 0.1.18 on toolchain 62efba8a050c64249dab942951bb28f710208bc8 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hts 0.1.18 [INFO] finished tweaking crates.io crate hts 0.1.18 [INFO] tweaked toml for crates.io crate hts 0.1.18 written to /workspace/builds/worker-13/source/Cargo.toml [INFO] crate crates.io crate hts 0.1.18 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d36499ee6ea0c5e78ae19d164dc2901d5916cac83f11c651b9795004730d4cd8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d36499ee6ea0c5e78ae19d164dc2901d5916cac83f11c651b9795004730d4cd8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d36499ee6ea0c5e78ae19d164dc2901d5916cac83f11c651b9795004730d4cd8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d36499ee6ea0c5e78ae19d164dc2901d5916cac83f11c651b9795004730d4cd8", kill_on_drop: false }` [INFO] [stdout] d36499ee6ea0c5e78ae19d164dc2901d5916cac83f11c651b9795004730d4cd8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:5736fa189c1c60b01babf4b8b698fe57b6ecc41933a7ff2e0b8d7a221459412b" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d8dd1d70a7804c532ed9cd6f2a67285dcb58babdfdc08eae9562374f6bca2122 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d8dd1d70a7804c532ed9cd6f2a67285dcb58babdfdc08eae9562374f6bca2122", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.93 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling regex-syntax v0.6.23 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Compiling regex v1.4.5 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling hts v0.1.18 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hts v0.1.18 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hts-f3b546647b0bea3c/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/hts-df95dbbdf8a9417a/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/hts-df95dbbdf8a9417a/out/htslib [INFO] [stderr] + git clone --recursive -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', build.rs:33:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5602e9affbcc - std::backtrace_rs::backtrace::libunwind::trace::h793e05efd273d0f4 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/../../backtrace/src/backtrace/libunwind.rs:93:5 [INFO] [stderr] 1: 0x5602e9affbcc - std::backtrace_rs::backtrace::trace_unsynchronized::h640b7b86ff610c77 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5602e9affbcc - std::sys_common::backtrace::_print_fmt::h362fa2a4f354f877 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5602e9affbcc - ::fmt::hf439e5ed84c74abd [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5602e9b24d2c - core::fmt::write::h72801a82c94e6ff1 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/core/src/fmt/mod.rs:1149:17 [INFO] [stderr] 5: 0x5602e9afbe85 - std::io::Write::write_fmt::h5562a8b6da0f0339 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/io/mod.rs:1697:15 [INFO] [stderr] 6: 0x5602e9b01620 - std::sys_common::backtrace::_print::hb29ddd998d02631c [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5602e9b01620 - std::sys_common::backtrace::print::h81965e3d7c90fbb6 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5602e9b01620 - std::panicking::default_hook::{{closure}}::h84db205ab6674b38 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:211:50 [INFO] [stderr] 9: 0x5602e9b011cb - std::panicking::default_hook::h1bf8bb4159936bca [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:228:9 [INFO] [stderr] 10: 0x5602e9b01cd4 - std::panicking::rust_panic_with_hook::hf8e86850fbbd03b1 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:606:17 [INFO] [stderr] 11: 0x5602e9b01782 - std::panicking::begin_panic_handler::{{closure}}::h590a0d6060ff866e [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:500:13 [INFO] [stderr] 12: 0x5602e9b00084 - std::sys_common::backtrace::__rust_end_short_backtrace::h260b8bd1c848a03c [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:139:18 [INFO] [stderr] 13: 0x5602e9b01719 - rust_begin_unwind [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:498:5 [INFO] [stderr] 14: 0x5602e95d3721 - core::panicking::panic_fmt::h7b8580d81fcbbacd [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/core/src/panicking.rs:106:14 [INFO] [stderr] 15: 0x5602e95d366d - core::panicking::panic::h50b51d19800453c0 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/core/src/panicking.rs:47:5 [INFO] [stderr] 16: 0x5602e95d47cb - build_script_build::build_own_htslib::h3ade959b94b3cc0c [INFO] [stderr] at /opt/rustwide/workdir/build.rs:33:5 [INFO] [stderr] 17: 0x5602e95d4c24 - build_script_build::main::h6b6c26ef092ddf12 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:65:9 [INFO] [stderr] 18: 0x5602e95d5e8b - core::ops::function::FnOnce::call_once::h8ee94dc984304413 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x5602e95d5a0e - std::sys_common::backtrace::__rust_begin_short_backtrace::h25917302fc9c4f74 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/sys_common/backtrace.rs:123:18 [INFO] [stderr] 20: 0x5602e95d62d1 - std::rt::lang_start::{{closure}}::h150260facf2d385d [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/rt.rs:145:18 [INFO] [stderr] 21: 0x5602e9aff411 - core::ops::function::impls:: for &F>::call_once::h42d3791e66d196c0 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x5602e9aff411 - std::panicking::try::do_call::hc3bcb188e535517f [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:406:40 [INFO] [stderr] 23: 0x5602e9aff411 - std::panicking::try::hb1edf04d4a7097ab [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:370:19 [INFO] [stderr] 24: 0x5602e9aff411 - std::panic::catch_unwind::h75ed941ac0d36d57 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panic.rs:133:14 [INFO] [stderr] 25: 0x5602e9aff411 - std::rt::lang_start_internal::{{closure}}::hc702b3389af4cbea [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/rt.rs:128:48 [INFO] [stderr] 26: 0x5602e9aff411 - std::panicking::try::do_call::h53276a03c7fe2ebc [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:406:40 [INFO] [stderr] 27: 0x5602e9aff411 - std::panicking::try::ha9e37f45dc542517 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panicking.rs:370:19 [INFO] [stderr] 28: 0x5602e9aff411 - std::panic::catch_unwind::h182647595766fee7 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/panic.rs:133:14 [INFO] [stderr] 29: 0x5602e9aff411 - std::rt::lang_start_internal::h571831ebdba142de [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/rt.rs:128:20 [INFO] [stderr] 30: 0x5602e95d62a0 - std::rt::lang_start::had9bd6c9c3b64bf1 [INFO] [stderr] at /rustc/62efba8a050c64249dab942951bb28f710208bc8/library/std/src/rt.rs:144:17 [INFO] [stderr] 31: 0x5602e95d528c - main [INFO] [stderr] 32: 0x7f97d7c4d0b3 - __libc_start_main [INFO] [stderr] 33: 0x5602e95d3ede - _start [INFO] [stderr] 34: 0x0 - [INFO] running `Command { std: "docker" "inspect" "d8dd1d70a7804c532ed9cd6f2a67285dcb58babdfdc08eae9562374f6bca2122", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d8dd1d70a7804c532ed9cd6f2a67285dcb58babdfdc08eae9562374f6bca2122", kill_on_drop: false }` [INFO] [stdout] d8dd1d70a7804c532ed9cd6f2a67285dcb58babdfdc08eae9562374f6bca2122