[INFO] cloning repository https://github.com/guertinlab/kmer_mask_em
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/kmer_mask_em" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] c1ae4fc642bd6330c9db7a4cf31f9b304ff6a874
[INFO] testing guertinlab/kmer_mask_em against master#62efba8a050c64249dab942951bb28f710208bc8 for pr-90799
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em" "/workspace/builds/worker-62/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-62/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/kmer_mask_em on toolchain 62efba8a050c64249dab942951bb28f710208bc8
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] finished tweaking git repo https://github.com/guertinlab/kmer_mask_em
[INFO] tweaked toml for git repo https://github.com/guertinlab/kmer_mask_em written to /workspace/builds/worker-62/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/kmer_mask_em already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] aea7d3fa03aa4bf47457767daba5d3fb78dbe2aebb7462207ab9c0c8734286cd
[INFO] running `Command { std: "docker" "start" "-a" "aea7d3fa03aa4bf47457767daba5d3fb78dbe2aebb7462207ab9c0c8734286cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "aea7d3fa03aa4bf47457767daba5d3fb78dbe2aebb7462207ab9c0c8734286cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aea7d3fa03aa4bf47457767daba5d3fb78dbe2aebb7462207ab9c0c8734286cd", kill_on_drop: false }`
[INFO] [stdout] aea7d3fa03aa4bf47457767daba5d3fb78dbe2aebb7462207ab9c0c8734286cd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 17c388f571dc3d39a8fb0d7601e2295ef5e32afcc19dcfc2dccd267e5f81f2ef
[INFO] running `Command { std: "docker" "start" "-a" "17c388f571dc3d39a8fb0d7601e2295ef5e32afcc19dcfc2dccd267e5f81f2ef", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling libc v0.2.21
[INFO] [stderr]    Compiling regex-syntax v0.4.0
[INFO] [stderr]    Compiling utf8-ranges v1.0.0
[INFO] [stderr]    Compiling strsim v0.6.0
[INFO] [stderr]    Compiling rustc-serialize v0.3.23
[INFO] [stderr]    Compiling unicode-width v0.1.4
[INFO] [stderr]    Compiling lazy_static v0.2.4
[INFO] [stderr]    Compiling tabwriter v1.0.3
[INFO] [stderr]    Compiling thread-id v3.0.0
[INFO] [stderr]    Compiling memchr v1.0.1
[INFO] [stderr]    Compiling rand v0.3.15
[INFO] [stderr]    Compiling num_cpus v1.3.0
[INFO] [stderr]    Compiling thread_local v0.3.3
[INFO] [stderr]    Compiling aho-corasick v0.6.3
[INFO] [stderr]    Compiling deque v0.3.1
[INFO] [stderr]    Compiling regex v0.2.1
[INFO] [stderr]    Compiling rayon v0.6.0
[INFO] [stderr]    Compiling docopt v0.7.0
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported
[INFO] [stdout]    --> src/main.rs:429:17
[INFO] [stdout]     |
[INFO] [stdout] 429 | #[derive(Debug, RustcDecodable)]
[INFO] [stdout]     |                 ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 27.59s
[INFO] running `Command { std: "docker" "inspect" "17c388f571dc3d39a8fb0d7601e2295ef5e32afcc19dcfc2dccd267e5f81f2ef", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "17c388f571dc3d39a8fb0d7601e2295ef5e32afcc19dcfc2dccd267e5f81f2ef", kill_on_drop: false }`
[INFO] [stdout] 17c388f571dc3d39a8fb0d7601e2295ef5e32afcc19dcfc2dccd267e5f81f2ef
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 412c0eeef52a71170125beb5bbfe117cdecd4d043b04f3d80c8bb677f8976874
[INFO] running `Command { std: "docker" "start" "-a" "412c0eeef52a71170125beb5bbfe117cdecd4d043b04f3d80c8bb677f8976874", kill_on_drop: false }`
[INFO] [stderr]    Compiling kmermask_em v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported
[INFO] [stdout]    --> src/main.rs:429:17
[INFO] [stdout]     |
[INFO] [stdout] 429 | #[derive(Debug, RustcDecodable)]
[INFO] [stdout]     |                 ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 1 warning emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.05s
[INFO] running `Command { std: "docker" "inspect" "412c0eeef52a71170125beb5bbfe117cdecd4d043b04f3d80c8bb677f8976874", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "412c0eeef52a71170125beb5bbfe117cdecd4d043b04f3d80c8bb677f8976874", kill_on_drop: false }`
[INFO] [stdout] 412c0eeef52a71170125beb5bbfe117cdecd4d043b04f3d80c8bb677f8976874
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-62/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e8397a04204aaf8b9f284182a6f9e27a3c2e67044d0943b4415b160bfc957681" "/opt/rustwide/cargo-home/bin/cargo" "+62efba8a050c64249dab942951bb28f710208bc8" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 41e8f4a8a03d8d3b61dc6720e00b974f7e21728f1576687a7a90a4ce5a1a7293
[INFO] running `Command { std: "docker" "start" "-a" "41e8f4a8a03d8d3b61dc6720e00b974f7e21728f1576687a7a90a4ce5a1a7293", kill_on_drop: false }`
[INFO] [stderr] warning: use of deprecated macro `RustcDecodable`: rustc-serialize is deprecated and no longer supported
[INFO] [stderr]    --> src/main.rs:429:17
[INFO] [stderr]     |
[INFO] [stderr] 429 | #[derive(Debug, RustcDecodable)]
[INFO] [stderr]     |                 ^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `kmermask_em` (bin "kmermask_em" test) generated 1 warning
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests (/opt/rustwide/target/debug/deps/kmermask_em-c92d050ea0bf2461)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "41e8f4a8a03d8d3b61dc6720e00b974f7e21728f1576687a7a90a4ce5a1a7293", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "41e8f4a8a03d8d3b61dc6720e00b974f7e21728f1576687a7a90a4ce5a1a7293", kill_on_drop: false }`
[INFO] [stdout] 41e8f4a8a03d8d3b61dc6720e00b974f7e21728f1576687a7a90a4ce5a1a7293