[INFO] cloning repository https://github.com/esrice/trio_binning
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/esrice/trio_binning" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b253f856c7979414f2a8346270715cb73779ccad
[INFO] checking esrice/trio_binning against try#39e1293fce4b650061e85dda88aa428f726a8444 for pr-88041
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning" "/workspace/builds/worker-13/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/esrice/trio_binning on toolchain 39e1293fce4b650061e85dda88aa428f726a8444
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+39e1293fce4b650061e85dda88aa428f726a8444" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/esrice/trio_binning
[INFO] finished tweaking git repo https://github.com/esrice/trio_binning
[INFO] tweaked toml for git repo https://github.com/esrice/trio_binning written to /workspace/builds/worker-13/source/Cargo.toml
[INFO] crate git repo https://github.com/esrice/trio_binning already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+39e1293fce4b650061e85dda88aa428f726a8444" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating git repository `https://github.com/rust-bio/rust-htslib.git`
[INFO] [stderr]     Updating git submodule `https://github.com/samtools/htslib.git`
[INFO] [stderr]     Updating git repository `https://github.com/alexcrichton/bzip2-rs.git`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded memchr v1.0.2
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded aho-corasick v0.6.6
[INFO] [stderr]   Downloaded parking_lot v0.6.3
[INFO] [stderr]   Downloaded nom v3.2.1
[INFO] [stderr]   Downloaded rand v0.4.3
[INFO] [stderr]   Downloaded cexpr v0.2.3
[INFO] [stderr]   Downloaded libloading v0.5.0
[INFO] [stderr]   Downloaded version_check v0.1.4
[INFO] [stderr]   Downloaded wincolor v1.0.0
[INFO] [stderr]   Downloaded url v1.7.1
[INFO] [stderr]   Downloaded mach v0.2.2
[INFO] [stderr]   Downloaded itertools v0.6.5
[INFO] [stderr]   Downloaded lock_api v0.1.3
[INFO] [stderr]   Downloaded buf_redux v0.7.1
[INFO] [stderr]   Downloaded proc-macro2 v0.3.5
[INFO] [stderr]   Downloaded quote v0.6.8
[INFO] [stderr]   Downloaded bindgen v0.36.1
[INFO] [stderr]   Downloaded clang-sys v0.22.0
[INFO] [stderr]   Downloaded termcolor v1.0.1
[INFO] [stderr]   Downloaded which v1.0.5
[INFO] [stderr]   Downloaded env_logger v0.5.12
[INFO] [stderr]   Downloaded ieee754 v0.2.2
[INFO] [stderr]   Downloaded quote v0.5.2
[INFO] [stderr]   Downloaded crossbeam-channel v0.2.4
[INFO] [stderr]   Downloaded regex-syntax v0.6.2
[INFO] [stderr]   Downloaded fs-utils v1.1.0
[INFO] [stderr]   Downloaded crossbeam-epoch v0.5.2
[INFO] [stderr]   Downloaded lzma-sys v0.1.11
[INFO] [stderr]   Downloaded regex v1.0.2
[INFO] [stderr]   Downloaded crossbeam-utils v0.5.0
[INFO] [stderr]   Downloaded seq_io v0.3.0
[INFO] [stderr]   Downloaded log v0.4.4
[INFO] [stderr]   Downloaded crossbeam v0.4.1
[INFO] [stderr]   Downloaded cc v1.0.18
[INFO] [stderr]   Downloaded proc-macro2 v0.4.13
[INFO] [stderr]   Downloaded slice-deque v0.1.11
[INFO] [stderr]   Downloaded serde_derive v1.0.72
[INFO] [stderr]   Downloaded bio-types v0.2.0
[INFO] [stderr]   Downloaded serde v1.0.72
[INFO] [stderr]   Downloaded crossbeam-deque v0.5.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+39e1293fce4b650061e85dda88aa428f726a8444" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6c3c9d057c81ab2d676f81fd3121e0a70f349a43b05dd383e5f1248c1f6db16e
[INFO] running `Command { std: "docker" "start" "-a" "6c3c9d057c81ab2d676f81fd3121e0a70f349a43b05dd383e5f1248c1f6db16e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6c3c9d057c81ab2d676f81fd3121e0a70f349a43b05dd383e5f1248c1f6db16e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6c3c9d057c81ab2d676f81fd3121e0a70f349a43b05dd383e5f1248c1f6db16e", kill_on_drop: false }`
[INFO] [stdout] 6c3c9d057c81ab2d676f81fd3121e0a70f349a43b05dd383e5f1248c1f6db16e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+39e1293fce4b650061e85dda88aa428f726a8444" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] dffb6df514195ad691cf8d4f5037e6081d51c584ecba0f4c44b86f9b939254e7
[INFO] running `Command { std: "docker" "start" "-a" "dffb6df514195ad691cf8d4f5037e6081d51c584ecba0f4c44b86f9b939254e7", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.71
[INFO] [stderr]    Compiling version_check v0.1.4
[INFO] [stderr]    Compiling cc v1.0.18
[INFO] [stderr]    Compiling regex v1.0.2
[INFO] [stderr]    Compiling maybe-uninit v2.0.0
[INFO] [stderr]     Checking scopeguard v0.3.3
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]    Compiling utf8-ranges v1.0.0
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]     Checking stable_deref_trait v1.1.1
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling termcolor v1.0.1
[INFO] [stderr]    Compiling serde v1.0.72
[INFO] [stderr]    Compiling strsim v0.7.0
[INFO] [stderr]    Compiling bindgen v0.36.1
[INFO] [stderr]    Compiling bitflags v1.0.3
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]     Checking rand_core v0.2.1
[INFO] [stderr]     Checking either v1.5.0
[INFO] [stderr]     Checking adler32 v1.0.4
[INFO] [stderr]     Checking scoped_threadpool v0.1.9
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.22.0
[INFO] [stderr]    Compiling regex-syntax v0.6.2
[INFO] [stderr]    Compiling proc-macro2 v0.3.5
[INFO] [stderr]    Compiling humantime v1.1.1
[INFO] [stderr]    Compiling fs-utils v1.1.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.13
[INFO] [stderr]    Compiling log v0.4.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking idna v0.1.5
[INFO] [stderr]     Checking crc32fast v1.2.0
[INFO] [stderr]     Checking owning_ref v0.3.3
[INFO] [stderr]     Checking itertools v0.6.5
[INFO] [stderr]     Checking miniz_oxide v0.3.6
[INFO] [stderr]     Checking lock_api v0.1.3
[INFO] [stderr]    Compiling lazy_static v1.1.0
[INFO] [stderr]     Checking smallvec v0.6.13
[INFO] [stderr]    Compiling quote v0.5.2
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]     Checking url v1.7.1
[INFO] [stderr]    Compiling quote v0.6.8
[INFO] [stderr]     Checking crossbeam-epoch v0.5.2
[INFO] [stderr]    Compiling syn v0.14.9
[INFO] [stderr]     Checking crossbeam-deque v0.5.2
[INFO] [stderr]    Compiling libloading v0.5.0
[INFO] [stderr]    Compiling lzma-sys v0.1.11
[INFO] [stderr]    Compiling bzip2-sys v0.1.6 (https://github.com/alexcrichton/bzip2-rs.git#54aef435)
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]     Checking memchr v2.0.1
[INFO] [stderr]     Checking rand v0.4.3
[INFO] [stderr]     Checking rand v0.5.5
[INFO] [stderr]     Checking term_size v0.3.1
[INFO] [stderr]     Checking slice-deque v0.1.11
[INFO] [stderr]     Checking atty v0.2.11
[INFO] [stderr]     Checking flate2 v1.0.14
[INFO] [stderr]    Compiling memchr v1.0.2
[INFO] [stderr]    Compiling which v1.0.5
[INFO] [stderr]     Checking textwrap v0.10.0
[INFO] [stderr]    Compiling nom v3.2.1
[INFO] [stderr]    Compiling aho-corasick v0.6.6
[INFO] [stderr]     Checking clap v2.32.0
[INFO] [stderr]     Checking buf_redux v0.7.1
[INFO] [stderr]     Checking parking_lot_core v0.2.14
[INFO] [stderr]     Checking parking_lot v0.6.3
[INFO] [stderr]    Compiling cexpr v0.2.3
[INFO] [stderr]     Checking crossbeam-channel v0.2.4
[INFO] [stderr]     Checking crossbeam v0.4.1
[INFO] [stderr]    Compiling serde_derive v1.0.72
[INFO] [stderr]    Compiling env_logger v0.5.12
[INFO] [stderr]     Checking bio-types v0.2.0
[INFO] [stderr]     Checking seq_io v0.3.0
[INFO] [stderr]    Compiling rust-htslib v0.21.1-alpha.0 (https://github.com/rust-bio/rust-htslib.git?rev=1f9736e#1f9736ef)
[INFO] [stderr]     Checking trio_binning v0.2.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 18s
[INFO] running `Command { std: "docker" "inspect" "dffb6df514195ad691cf8d4f5037e6081d51c584ecba0f4c44b86f9b939254e7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dffb6df514195ad691cf8d4f5037e6081d51c584ecba0f4c44b86f9b939254e7", kill_on_drop: false }`
[INFO] [stdout] dffb6df514195ad691cf8d4f5037e6081d51c584ecba0f4c44b86f9b939254e7