[INFO] cloning repository https://github.com/Mr-Milk/SpatialTis-core
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Mr-Milk/SpatialTis-core" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMr-Milk%2FSpatialTis-core", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMr-Milk%2FSpatialTis-core'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 2b4841928b0eb7d51133905da275b6d881d721c1
[INFO] checking Mr-Milk/SpatialTis-core against master#8007b506ac5da629f223b755f5a5391edd5f6d01 for pr-88041
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMr-Milk%2FSpatialTis-core" "/workspace/builds/worker-75/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-75/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Mr-Milk/SpatialTis-core on toolchain 8007b506ac5da629f223b755f5a5391edd5f6d01
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Mr-Milk/SpatialTis-core
[INFO] finished tweaking git repo https://github.com/Mr-Milk/SpatialTis-core
[INFO] tweaked toml for git repo https://github.com/Mr-Milk/SpatialTis-core written to /workspace/builds/worker-75/source/Cargo.toml
[INFO] crate git repo https://github.com/Mr-Milk/SpatialTis-core already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: unused manifest key: target.x86_64-apple-darwin.rustflags
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-75/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-75/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3abe3533fbeffc731671bc5b6f720146401adcb0b4d57deca55d041ae4a06873
[INFO] running `Command { std: "docker" "start" "-a" "3abe3533fbeffc731671bc5b6f720146401adcb0b4d57deca55d041ae4a06873", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3abe3533fbeffc731671bc5b6f720146401adcb0b4d57deca55d041ae4a06873", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3abe3533fbeffc731671bc5b6f720146401adcb0b4d57deca55d041ae4a06873", kill_on_drop: false }`
[INFO] [stdout] 3abe3533fbeffc731671bc5b6f720146401adcb0b4d57deca55d041ae4a06873
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-75/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-75/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b7d38bc94b004386c0b2697cdd14f56a21d51d18d4052c766ad74be4a9bb30bf
[INFO] running `Command { std: "docker" "start" "-a" "b7d38bc94b004386c0b2697cdd14f56a21d51d18d4052c766ad74be4a9bb30bf", kill_on_drop: false }`
[INFO] [stderr] warning: unused manifest key: target.x86_64-apple-darwin.rustflags
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling libc v0.2.97
[INFO] [stderr]    Compiling syn v1.0.73
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling pyo3-build-config v0.14.1
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.5
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]    Compiling once_cell v1.8.0
[INFO] [stderr]    Compiling rayon-core v1.9.1
[INFO] [stderr]     Checking stable_deref_trait v1.2.0
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling heapless v0.6.1
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]    Compiling paste v1.0.5
[INFO] [stderr]     Checking pdqselect v0.1.0
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]    Compiling anyhow v1.0.41
[INFO] [stderr]     Checking robust v0.2.3
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]     Checking delaunator v0.2.1
[INFO] [stderr]     Checking hashbag v0.1.3
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling memoffset v0.6.4
[INFO] [stderr]    Compiling num-rational v0.4.0
[INFO] [stderr]    Compiling rayon v1.5.1
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling libm v0.2.1
[INFO] [stderr]    Compiling typenum v1.13.0
[INFO] [stderr]    Compiling generic-array v0.14.4
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]     Checking instant v0.1.9
[INFO] [stderr]     Checking matrixmultiply v0.3.1
[INFO] [stderr]     Checking lock_api v0.4.4
[INFO] [stderr]     Checking geographiclib-rs v0.2.0
[INFO] [stderr]     Checking hash32 v0.1.1
[INFO] [stderr]     Checking itertools v0.10.1
[INFO] [stderr]     Checking crossbeam-channel v0.5.1
[INFO] [stderr]     Checking crossbeam-deque v0.8.0
[INFO] [stderr]     Checking getrandom v0.2.3
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking parking_lot_core v0.8.3
[INFO] [stderr]     Checking generic-array v0.12.4
[INFO] [stderr]     Checking generic-array v0.13.3
[INFO] [stderr]    Compiling pyo3 v0.14.1
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking parking_lot v0.11.1
[INFO] [stderr]     Checking rand_chacha v0.3.1
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[INFO] [stderr]     Checking num-complex v0.4.0
[INFO] [stderr]     Checking approx v0.5.0
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[INFO] [stderr]     Checking kiddo v0.1.4
[INFO] [stderr]     Checking counter v0.5.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking rand v0.8.4
[INFO] [stderr]     Checking simba v0.5.1
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]     Checking rand_distr v0.4.1
[INFO] [stderr]     Checking rstar v0.8.3
[INFO] [stderr]     Checking rstar v0.9.0
[INFO] [stderr]     Checking geo-types v0.7.2
[INFO] [stderr]     Checking ndarray v0.15.3
[INFO] [stderr]     Checking geo v0.18.0
[INFO] [stderr]    Compiling pyo3-macros-backend v0.14.1
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling pyo3-macros v0.14.1
[INFO] [stderr]     Checking indoc v0.3.6
[INFO] [stderr]     Checking ndarray-stats v0.5.0
[INFO] [stderr]     Checking nalgebra v0.28.0
[INFO] [stderr]     Checking nalgebra v0.27.1
[INFO] [stderr]     Checking numpy v0.14.1
[INFO] [stderr]     Checking statrs v0.15.0
[INFO] [stderr]     Checking nalgebra-sparse v0.4.0
[INFO] [stderr]     Checking spatialtis_core v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::collections::HashMap`
[INFO] [stdout]  --> src/entropy.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::collections::HashMap;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `counter::Counter`
[INFO] [stdout]  --> src/entropy.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | use counter::Counter;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `ndarray_stats::QuantileExt`
[INFO] [stdout]  --> src/entropy.rs:6:5
[INFO] [stdout]   |
[INFO] [stdout] 6 | use ndarray_stats::QuantileExt;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::collections::HashMap`
[INFO] [stdout]  --> src/entropy.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::collections::HashMap;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `counter::Counter`
[INFO] [stdout]  --> src/entropy.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | use counter::Counter;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `ndarray_stats::QuantileExt`
[INFO] [stdout]  --> src/entropy.rs:6:5
[INFO] [stdout]   |
[INFO] [stdout] 6 | use ndarray_stats::QuantileExt;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `ndarray::prelude::*`
[INFO] [stdout]    --> src/entropy.rs:172:9
[INFO] [stdout]     |
[INFO] [stdout] 172 |     use ndarray::prelude::*;
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 4 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [optimized + debuginfo] target(s) in 35.35s
[INFO] running `Command { std: "docker" "inspect" "b7d38bc94b004386c0b2697cdd14f56a21d51d18d4052c766ad74be4a9bb30bf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b7d38bc94b004386c0b2697cdd14f56a21d51d18d4052c766ad74be4a9bb30bf", kill_on_drop: false }`
[INFO] [stdout] b7d38bc94b004386c0b2697cdd14f56a21d51d18d4052c766ad74be4a9bb30bf