[INFO] cloning repository https://github.com/DiDeoxy/SNiPpers [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/DiDeoxy/SNiPpers" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDiDeoxy%2FSNiPpers", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDiDeoxy%2FSNiPpers'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d857e5a6a2bf5bfd0256d815ac22d2fbfaf5defc [INFO] checking DiDeoxy/SNiPpers against master#8007b506ac5da629f223b755f5a5391edd5f6d01 for pr-88041 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDiDeoxy%2FSNiPpers" "/workspace/builds/worker-111/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-111/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/DiDeoxy/SNiPpers on toolchain 8007b506ac5da629f223b755f5a5391edd5f6d01 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/DiDeoxy/SNiPpers [INFO] finished tweaking git repo https://github.com/DiDeoxy/SNiPpers [INFO] tweaked toml for git repo https://github.com/DiDeoxy/SNiPpers written to /workspace/builds/worker-111/source/Cargo.toml [INFO] crate git repo https://github.com/DiDeoxy/SNiPpers already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded hts-sys v2.0.1 [INFO] [stderr] Downloaded curl-sys v0.4.43+curl-7.76.0 [INFO] [stderr] Downloaded rust-htslib v0.38.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-111/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-111/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9a5d2c4f7999e71018dd6bdb27f65039246b576b7ec637ba123ba075946776fd [INFO] running `Command { std: "docker" "start" "-a" "9a5d2c4f7999e71018dd6bdb27f65039246b576b7ec637ba123ba075946776fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9a5d2c4f7999e71018dd6bdb27f65039246b576b7ec637ba123ba075946776fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9a5d2c4f7999e71018dd6bdb27f65039246b576b7ec637ba123ba075946776fd", kill_on_drop: false }` [INFO] [stdout] 9a5d2c4f7999e71018dd6bdb27f65039246b576b7ec637ba123ba075946776fd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-111/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-111/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+8007b506ac5da629f223b755f5a5391edd5f6d01" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] aaf6de5a970bae2314b207898c02866f7466911869a5d6626200b7a72350230a [INFO] running `Command { std: "docker" "start" "-a" "aaf6de5a970bae2314b207898c02866f7466911869a5d6626200b7a72350230a", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking regex-syntax v0.6.25 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking yaml-rust v0.3.5 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Compiling libc v0.2.94 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Compiling heck v0.3.2 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Compiling jobserver v0.1.22 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Checking aho-corasick v0.7.18 [INFO] [stderr] Compiling cc v1.0.67 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Compiling openssl-sys v0.9.63 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling bzip2-sys v0.1.10+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.43+curl-7.76.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling hts-sys v2.0.1 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Compiling thiserror-impl v1.0.24 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Checking thiserror v1.0.24 [INFO] [stderr] Checking bio-types v0.11.0 [INFO] [stderr] Checking rust-htslib v0.38.2 [INFO] [stderr] Checking SNiPpers v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `cont_hm_post_maf_vec` [INFO] [stdout] --> src/main.rs:46:9 [INFO] [stdout] | [INFO] [stdout] 46 | let cont_hm_post_maf_vec: HashMap> = cont_hm_postn_vec_geno_vec [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cont_hm_post_maf_vec` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `cont_hm_post_maf_vec` [INFO] [stdout] --> src/main.rs:46:9 [INFO] [stdout] | [INFO] [stdout] 46 | let cont_hm_post_maf_vec: HashMap> = cont_hm_postn_vec_geno_vec [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cont_hm_post_maf_vec` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: crate `SNiPpers` should have a snake case name [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] = help: convert the identifier to snake case: `sni_ppers` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: crate `SNiPpers` should have a snake case name [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] = help: convert the identifier to snake case: `sni_ppers` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 34.77s [INFO] running `Command { std: "docker" "inspect" "aaf6de5a970bae2314b207898c02866f7466911869a5d6626200b7a72350230a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "aaf6de5a970bae2314b207898c02866f7466911869a5d6626200b7a72350230a", kill_on_drop: false }` [INFO] [stdout] aaf6de5a970bae2314b207898c02866f7466911869a5d6626200b7a72350230a