[INFO] cloning repository https://github.com/38/pyd4 [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 15f07e7e103cd4bd5474c7098c2c3d7a72ede2bd [INFO] checking 38/pyd4 against try#3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f for pr-87248 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-14/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-14/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain 3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/38/pyd4 [INFO] finished tweaking git repo https://github.com/38/pyd4 [INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ctor v0.1.15 [INFO] [stderr] Downloaded inventory-impl v0.1.9 [INFO] [stderr] Downloaded inventory v0.1.9 [INFO] [stderr] Downloaded pyo3cls v0.12.1 [INFO] [stderr] Downloaded d4-framefile v0.1.13 [INFO] [stderr] Downloaded d4 v0.1.13 [INFO] [stderr] Downloaded d4-hts v0.1.13 [INFO] [stderr] Downloaded unindent v0.1.6 [INFO] [stderr] Downloaded pyo3 v0.12.1 [INFO] [stderr] Downloaded pyo3-derive-backend v0.12.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4978eb2dc2b0d7b05814bb0975b46bbd123f9e8e80937e87c94f5a09ac4ba03e [INFO] running `Command { std: "docker" "start" "-a" "4978eb2dc2b0d7b05814bb0975b46bbd123f9e8e80937e87c94f5a09ac4ba03e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4978eb2dc2b0d7b05814bb0975b46bbd123f9e8e80937e87c94f5a09ac4ba03e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4978eb2dc2b0d7b05814bb0975b46bbd123f9e8e80937e87c94f5a09ac4ba03e", kill_on_drop: false }` [INFO] [stdout] 4978eb2dc2b0d7b05814bb0975b46bbd123f9e8e80937e87c94f5a09ac4ba03e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 283ab6efbd533bc2ee23eae954ae38e93f2e21a73d8757f8f487545f55b0a7bf [INFO] running `Command { std: "docker" "start" "-a" "283ab6efbd533bc2ee23eae954ae38e93f2e21a73d8757f8f487545f55b0a7bf", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Checking smallvec v1.4.2 [INFO] [stderr] Compiling unindent v0.1.6 [INFO] [stderr] Compiling inventory v0.1.9 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Compiling pyo3 v0.12.1 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling miniz_oxide v0.4.2 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking crc32fast v1.2.0 [INFO] [stderr] Checking instant v0.1.7 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Checking lock_api v0.4.1 [INFO] [stderr] Checking parking_lot_core v0.8.0 [INFO] [stderr] Compiling clang-sys v1.0.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking parking_lot v0.11.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking flate2 v1.0.17 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking d4-framefile v0.1.13 [INFO] [stderr] Checking serde_json v1.0.57 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling pyo3-derive-backend v0.12.1 [INFO] [stderr] Compiling inventory-impl v0.1.9 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Compiling ctor v0.1.15 [INFO] [stderr] Compiling ghost v0.1.2 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling pyo3cls v0.12.1 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Compiling d4-hts v0.1.13 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.1.13` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-2056b2fe95fb3936/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-a358ee6f2bc6ddb2/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-a358ee6f2bc6ddb2/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build_htslib.sh\",\n &version]).stdout(std::process::Stdio::null()).spawn().expect(\"Unable to build htslib\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55f6677e50b0 - std::backtrace_rs::backtrace::libunwind::trace::h0f5cd2ee8b0d7274 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x55f6677e50b0 - std::backtrace_rs::backtrace::trace_unsynchronized::h06905b5aeda069a1 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55f6677e50b0 - std::sys_common::backtrace::_print_fmt::h4fe4c7c875072f30 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55f6677e50b0 - ::fmt::hcc0746f004a9b7ef [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55f667809bac - core::fmt::write::h9a6d9c74526a6c1b [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/core/src/fmt/mod.rs:1115:17 [INFO] [stderr] 5: 0x55f6677e1e45 - std::io::Write::write_fmt::h23dab4cc9ce72ee2 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/io/mod.rs:1665:15 [INFO] [stderr] 6: 0x55f6677e757b - std::sys_common::backtrace::_print::h173dc702502d65d2 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55f6677e757b - std::sys_common::backtrace::print::h61bd27c4742ba817 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55f6677e757b - std::panicking::default_hook::{{closure}}::hcaae87f0495ae613 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55f6677e7051 - std::panicking::default_hook::h0538e728ee080db0 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x55f6677e7c44 - std::panicking::rust_panic_with_hook::h3039e236b6ca482c [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:622:17 [INFO] [stderr] 11: 0x55f6677e76f7 - std::panicking::begin_panic_handler::{{closure}}::h884fbab544ffd91c [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:517:13 [INFO] [stderr] 12: 0x55f6677e55ac - std::sys_common::backtrace::__rust_end_short_backtrace::hdaf2e18ba3d91210 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55f6677e7689 - rust_begin_unwind [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:515:5 [INFO] [stderr] 14: 0x55f667296951 - core::panicking::panic_fmt::hcf5f6d96e1dd7099 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x55f66729689d - core::panicking::panic::hd695e3b1d0dd4ef4 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x55f667297a9d - build_script_build::build_own_htslib::h811f138d18a5f8ad [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:34:5 [INFO] [stderr] 17: 0x55f667297efe - build_script_build::main::h559120fab458abba [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-hts-0.1.13/build.rs:66:9 [INFO] [stderr] 18: 0x55f66729962b - core::ops::function::FnOnce::call_once::he743f81597d77ef0 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 19: 0x55f667298d1e - std::sys_common::backtrace::__rust_begin_short_backtrace::h16a3d705a0067888 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 20: 0x55f667299531 - std::rt::lang_start::{{closure}}::hacc3895d78b1e8e5 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/rt.rs:63:18 [INFO] [stderr] 21: 0x55f6677e824a - core::ops::function::impls:: for &F>::call_once::h61bcc1dec5918b7e [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 22: 0x55f6677e824a - std::panicking::try::do_call::h672d24f85ce22db4 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:401:40 [INFO] [stderr] 23: 0x55f6677e824a - std::panicking::try::he383e7ef11604e58 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:365:19 [INFO] [stderr] 24: 0x55f6677e824a - std::panic::catch_unwind::h502ac6058961e393 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panic.rs:434:14 [INFO] [stderr] 25: 0x55f6677e824a - std::rt::lang_start_internal::{{closure}}::h851ee37bb5d99fdf [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/rt.rs:45:48 [INFO] [stderr] 26: 0x55f6677e824a - std::panicking::try::do_call::h84f41bb3453bbd14 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:401:40 [INFO] [stderr] 27: 0x55f6677e824a - std::panicking::try::h969c45dbbf2e4c94 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panicking.rs:365:19 [INFO] [stderr] 28: 0x55f6677e824a - std::panic::catch_unwind::he40b1a4614f73e03 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/panic.rs:434:14 [INFO] [stderr] 29: 0x55f6677e824a - std::rt::lang_start_internal::h0fbab25cccdb30d8 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/rt.rs:45:20 [INFO] [stderr] 30: 0x55f667299500 - std::rt::lang_start::hb96e904ab1339ad0 [INFO] [stderr] at /rustc/3e59a8c2f14152ccc92a6c079f592dc2dc6fa93f/library/std/src/rt.rs:62:5 [INFO] [stderr] 31: 0x55f66729854c - main [INFO] [stderr] 32: 0x7f59d30880b3 - __libc_start_main [INFO] [stderr] 33: 0x55f66729714e - _start [INFO] [stderr] 34: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "283ab6efbd533bc2ee23eae954ae38e93f2e21a73d8757f8f487545f55b0a7bf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "283ab6efbd533bc2ee23eae954ae38e93f2e21a73d8757f8f487545f55b0a7bf", kill_on_drop: false }` [INFO] [stdout] 283ab6efbd533bc2ee23eae954ae38e93f2e21a73d8757f8f487545f55b0a7bf