[INFO] fetching crate rust-htslib 0.38.2... [INFO] checking rust-htslib-0.38.2 against try#a7a572ce3edd6d476191fbfe92c9c1986e009b34 for pr-87190-3 [INFO] extracting crate rust-htslib 0.38.2 into /workspace/builds/worker-98/source [INFO] validating manifest of crates.io crate rust-htslib 0.38.2 on toolchain a7a572ce3edd6d476191fbfe92c9c1986e009b34 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-98/source/.cargo/config [INFO] started tweaking crates.io crate rust-htslib 0.38.2 [INFO] finished tweaking crates.io crate rust-htslib 0.38.2 [INFO] tweaked toml for crates.io crate rust-htslib 0.38.2 written to /workspace/builds/worker-98/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded libdeflate-sys v0.5.0 [INFO] [stderr] Downloaded bio-types v0.12.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded lzma-sys v0.1.17 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded hts-sys v2.0.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-98/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-98/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ecbeb1e87c07bec463ff73bccd1bf7f7f14c0de85f2231cd5b996977b852d2c3 [INFO] running `Command { std: "docker" "start" "-a" "ecbeb1e87c07bec463ff73bccd1bf7f7f14c0de85f2231cd5b996977b852d2c3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ecbeb1e87c07bec463ff73bccd1bf7f7f14c0de85f2231cd5b996977b852d2c3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ecbeb1e87c07bec463ff73bccd1bf7f7f14c0de85f2231cd5b996977b852d2c3", kill_on_drop: false }` [INFO] [stdout] ecbeb1e87c07bec463ff73bccd1bf7f7f14c0de85f2231cd5b996977b852d2c3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-98/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-98/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:34b6a614d2c27851fe6cbf88fbd1137609cefab8b10d0615aaeb6fd47975d74e" "/opt/rustwide/cargo-home/bin/cargo" "+a7a572ce3edd6d476191fbfe92c9c1986e009b34" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6c85500bfa4353ea6016c86355ebe705f33cbd9c40c0c129fe580b5967808794 [INFO] running `Command { std: "docker" "start" "-a" "6c85500bfa4353ea6016c86355ebe705f33cbd9c40c0c129fe580b5967808794", kill_on_drop: false }` [INFO] [stderr] Copying to /tmp/fixit [INFO] [stderr] Running `cargo fix --edition` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] note: Switching to Edition 2021 will enable the use of the version 2 feature resolver in Cargo. [INFO] [stderr] This may cause some dependencies to be built with fewer features enabled than previously. [INFO] [stderr] More information about the resolver changes may be found at https://doc.rust-lang.org/nightly/edition-guide/rust-2021/default-cargo-resolver.html [INFO] [stderr] When building the following dependencies, the given features will no longer be used: [INFO] [stderr] [INFO] [stderr] syn v1.0.75 (as host dependency): full [INFO] [stderr] [INFO] [stderr] Compiling libc v0.2.100 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling proc-macro2 v1.0.28 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.75 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Checking matches v0.1.9 [INFO] [stderr] Compiling serde v1.0.128 [INFO] [stderr] Checking unicode-bidi v0.3.6 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling serde_json v1.0.66 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Checking difference v2.0.0 [INFO] [stderr] Checking itoa v0.4.8 [INFO] [stderr] Checking tinyvec v1.3.1 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Checking pretty_assertions v0.6.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking unicode-normalization v0.1.19 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Compiling cc v1.0.69 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Compiling cmake v0.1.45 [INFO] [stderr] Checking rand v0.8.4 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling openssl-sys v0.9.66 [INFO] [stderr] Compiling curl-sys v0.4.45+curl-7.78.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Checking tempfile v3.2.0 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Compiling thiserror-impl v1.0.26 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking thiserror v1.0.26 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Checking rust-htslib v0.38.2 (/tmp/fixit) [INFO] [stderr] Migrating src/lib.rs from 2018 edition to 2021 [INFO] [stderr] Fixed src/bcf/record.rs (3 fixes) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 40.62s [INFO] [stderr] Running `cargo check` to verify 2021 [INFO] [stderr] Compiling syn v1.0.75 [INFO] [stderr] Compiling thiserror-impl v1.0.26 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking thiserror v1.0.26 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Checking rust-htslib v0.38.2 (/tmp/fixit) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 14.40s [INFO] running `Command { std: "docker" "inspect" "6c85500bfa4353ea6016c86355ebe705f33cbd9c40c0c129fe580b5967808794", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6c85500bfa4353ea6016c86355ebe705f33cbd9c40c0c129fe580b5967808794", kill_on_drop: false }` [INFO] [stdout] 6c85500bfa4353ea6016c86355ebe705f33cbd9c40c0c129fe580b5967808794